RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 FAM200AQ8TCP9 573 aa19■□□□□ 0.63
CHRNA7-221ENST00000636898 ZSCAN16Q9H4T2 348 aaPredicted RBP19■□□□□ 0.63
CHRNA7-221ENST00000636898 NDUFB9Q9Y6M9 179 aa19■□□□□ 0.63
CHRNA7-221ENST00000636898 PAPPAQ13219 1627 aa19■□□□□ 0.63
CHRNA7-221ENST00000636898 TPM3P06753 285 aa18.99■□□□□ 0.63
CHRNA7-221ENST00000636898 LIG1P18858 919 aa18.99■□□□□ 0.63
CHRNA7-221ENST00000636898 FAM173BQ6P4H8 233 aa18.99■□□□□ 0.63
CHRNA7-221ENST00000636898 RBM43Q6ZSC3 357 aaKnown RBP18.99■□□□□ 0.63
CHRNA7-221ENST00000636898 CCDC191Q8NCU4 936 aa18.99■□□□□ 0.63
CHRNA7-221ENST00000636898 UBE2Q2Q8WVN8 375 aa18.99■□□□□ 0.63
CHRNA7-221ENST00000636898 PAG1Q9NWQ8 432 aa18.99■□□□□ 0.63
CHRNA7-221ENST00000636898 LAMA4Q16363 1823 aa18.99■□□□□ 0.63
CHRNA7-221ENST00000636898 SMARCC2Q8TAQ2 1214 aa18.99■□□□□ 0.63
CHRNA7-221ENST00000636898 KCPQ6ZWJ8 1503 aa18.98■□□□□ 0.63
CHRNA7-221ENST00000636898 PFKFB2O60825 505 aa18.98■□□□□ 0.63
CHRNA7-221ENST00000636898 CIAO1O76071 339 aa18.98■□□□□ 0.63
CHRNA7-221ENST00000636898 RESTQ13127 1097 aa18.98■□□□□ 0.63
CHRNA7-221ENST00000636898 DHX32Q7L7V1 743 aaKnown RBP18.98■□□□□ 0.63
CHRNA7-221ENST00000636898 JAK2O60674 1132 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 HSP90B1P14625 803 aaKnown RBP18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 ZMYM1Q5SVZ6 1142 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 BRF1Q92994 677 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 AGXT2Q9BYV1 514 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 TNMDQ9H2S6 317 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 CHMP3Q9Y3E7 222 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 EYA2O00167 538 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 CHGBP05060 677 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 TYRO3Q06418 890 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 TTLL7Q6ZT98 887 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 ZCRB1Q8TBF4 217 aaKnown RBP18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 PDCL3Q9H2J4 239 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 DACT1Q9NYF0 836 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 CFAP45Q9UL16 551 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 WDR17Q8IZU2 1322 aa18.97■□□□□ 0.63
CHRNA7-221ENST00000636898 UQCRHLA0A096LP55 91 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 GOLIM4O00461 696 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 DYNC1I1O14576 645 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 UQCRHP07919 91 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 SCRN1Q12765 414 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 NKX1-1Q15270 411 aaPredicted RBP18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 STOX1Q6ZVD7 989 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 NEUROD6Q96NK8 337 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 CLSTN2Q9H4D0 955 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 MRVI1Q9Y6F6 885 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 H3BQV1 296 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 HMGN5P82970 282 aaKnown RBP18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 NOLC1Q14978 699 aaKnown RBP eCLIP18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 IFFO2Q5TF58 517 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 NAA16Q6N069 864 aaPredicted RBP18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 TTC12Q9H892 705 aaPredicted RBP18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 SPTLC3Q9NUV7 552 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 TFIP11Q9UBB9 837 aaKnown RBP18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 KIF3AQ9Y496 699 aa18.96■□□□□ 0.63
CHRNA7-221ENST00000636898 FGD1P98174 961 aa18.95■□□□□ 0.62
CHRNA7-221ENST00000636898 CHMP4CQ96CF2 233 aa18.95■□□□□ 0.62
CHRNA7-221ENST00000636898 GOLGA6L6A8MZA4 724 aa18.94■□□□□ 0.62
CHRNA7-221ENST00000636898 AP5Z1O43299 807 aa18.94■□□□□ 0.62
CHRNA7-221ENST00000636898 EXOSC10Q01780 885 aaKnown RBP18.94■□□□□ 0.62
CHRNA7-221ENST00000636898 MYH15Q9Y2K3 1946 aa18.94■□□□□ 0.62
CHRNA7-221ENST00000636898 TNS2Q63HR2 1409 aa18.94■□□□□ 0.62
CHRNA7-221ENST00000636898 TIMM10P62072 90 aa18.94■□□□□ 0.62
CHRNA7-221ENST00000636898 PGBD1Q96JS3 809 aa18.94■□□□□ 0.62
CHRNA7-221ENST00000636898 ZNF830Q96NB3 372 aaPredicted RBP18.94■□□□□ 0.62
CHRNA7-221ENST00000636898 FBXO3Q9UK99 471 aa18.94■□□□□ 0.62
CHRNA7-221ENST00000636898 CAVIN2O95810 425 aa18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 CAMK4Q16566 473 aa18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 GLIPR1L2Q4G1C9 344 aa18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 NSUN7Q8NE18 718 aaKnown RBP18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 RNF113AO15541 343 aaKnown RBP18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 A1BGP04217 495 aa18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 IFIT1P09914 478 aaKnown RBP18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 HSPD1P10809 573 aaKnown RBP18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 PLCB2Q00722 1185 aa18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 LRRFIP1Q32MZ4 808 aaKnown RBP18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 ATL3Q6DD88 541 aa18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 FBXL16Q8N461 479 aa18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 PRIMPOLQ96LW4 560 aa18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 MAP7D2Q96T17 732 aa18.93■□□□□ 0.62
CHRNA7-221ENST00000636898 A0A1B0GUL7 405 aa18.92■□□□□ 0.62
CHRNA7-221ENST00000636898 BICD2Q8TD16 824 aa18.92■□□□□ 0.62
CHRNA7-221ENST00000636898 MAST3O60307 1309 aa18.91■□□□□ 0.62
CHRNA7-221ENST00000636898 COL5A2P05997 1499 aaPredicted RBP18.91■□□□□ 0.62
CHRNA7-221ENST00000636898 E7EWF7 191 aa18.91■□□□□ 0.62
CHRNA7-221ENST00000636898 NR1I2O75469 434 aa18.91■□□□□ 0.62
CHRNA7-221ENST00000636898 LRRC24Q50LG9 513 aa18.91■□□□□ 0.62
CHRNA7-221ENST00000636898 DDX11Q96FC9 970 aa18.91■□□□□ 0.62
CHRNA7-221ENST00000636898 TOM1L2Q6ZVM7 507 aa18.91■□□□□ 0.62
CHRNA7-221ENST00000636898 MPNDQ8N594 471 aa18.91■□□□□ 0.62
CHRNA7-221ENST00000636898 ZNF274Q96GC6 653 aaPredicted RBP18.91■□□□□ 0.62
CHRNA7-221ENST00000636898 LRRC2Q9BYS8 371 aa18.91■□□□□ 0.62
CHRNA7-221ENST00000636898 ZBTB3Q9H5J0 574 aa18.91■□□□□ 0.62
CHRNA7-221ENST00000636898 SALL1Q9NSC2 1324 aa18.9■□□□□ 0.62
CHRNA7-221ENST00000636898 ANO6Q4KMQ2 910 aa18.9■□□□□ 0.62
CHRNA7-221ENST00000636898 DNTTIP2Q5QJE6 756 aaKnown RBP18.9■□□□□ 0.62
CHRNA7-221ENST00000636898 CKAP2LQ8IYA6 745 aa18.9■□□□□ 0.62
CHRNA7-221ENST00000636898 ISCA1Q9BUE6 129 aa18.9■□□□□ 0.62
CHRNA7-221ENST00000636898 PRDM11Q9NQV5 511 aa18.9■□□□□ 0.62
CHRNA7-221ENST00000636898 CCDC9Q9Y3X0 531 aaKnown RBP18.9■□□□□ 0.62
CHRNA7-221ENST00000636898 SHANK3Q9BYB0 1731 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms