RNA–Protein interactions for RNA: ENST00000636775.1

LGI1-223, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,050 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-223	ENST00000636775	RFX7	Q2KHR2	1363 aa		11.32	□□□□□ -0.6
LGI1-223	ENST00000636775		A0A1B0GUL7	405 aa		11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	IFIT5	Q13325	482 aa	Known RBP	11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	KIAA1211	Q6ZU35	1233 aa		11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	LINC00116	Q8NCU8	138 aa		11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	GREM2	Q9H772	168 aa		11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	SNX14	Q9Y5W7	946 aa		11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	COL4A1	P02462	1669 aa		11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	PDE8A	O60658	829 aa		11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	ITGA6	P23229	1130 aa		11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	SUSD4	Q5VX71	490 aa		11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	DNAJC2	Q99543	621 aa	Known RBP	11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	TCHH	Q07283	1943 aa		11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	CCDC171	Q6TFL3	1326 aa		11.31	□□□□□ -0.6
LGI1-223	ENST00000636775	UBR3	Q6ZT12	1888 aa		11.3	□□□□□ -0.6
LGI1-223	ENST00000636775	MYH13	Q9UKX3	1938 aa		11.3	□□□□□ -0.6
LGI1-223	ENST00000636775	KCNQ4	P56696	695 aa		11.3	□□□□□ -0.6
LGI1-223	ENST00000636775	TAF7L	Q5H9L4	462 aa		11.3	□□□□□ -0.6
LGI1-223	ENST00000636775	RASEF	Q8IZ41	740 aa		11.3	□□□□□ -0.6
LGI1-223	ENST00000636775	CEP126	Q9P2H0	1117 aa		11.3	□□□□□ -0.6
LGI1-223	ENST00000636775	PLSCR1	O15162	318 aa		11.29	□□□□□ -0.6
LGI1-223	ENST00000636775	UPF3B	Q9BZI7	483 aa	Known RBP	11.29	□□□□□ -0.6
LGI1-223	ENST00000636775	CHD4	Q14839	1912 aa		11.29	□□□□□ -0.6
LGI1-223	ENST00000636775	ANKRD18B	A2A2Z9	1011 aa		11.29	□□□□□ -0.6
LGI1-223	ENST00000636775	CHGB	P05060	677 aa		11.29	□□□□□ -0.6
LGI1-223	ENST00000636775	RAB3GAP1	Q15042	981 aa		11.29	□□□□□ -0.6
LGI1-223	ENST00000636775	DDX46	Q7L014	1031 aa	Known RBP	11.29	□□□□□ -0.6
LGI1-223	ENST00000636775	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.29	□□□□□ -0.6
LGI1-223	ENST00000636775	KCNB2	Q92953	911 aa		11.29	□□□□□ -0.6
LGI1-223	ENST00000636775	RIPOR2	Q9Y4F9	1068 aa		11.29	□□□□□ -0.6
LGI1-223	ENST00000636775	FAM177B	A6PVY3	158 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	ADORA1	P30542	326 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	NECTIN1	Q15223	517 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	SH3TC1	Q8TE82	1336 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	MAP4K1	Q92918	833 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	TMX3	Q96JJ7	454 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	CNTNAP4	Q9C0A0	1308 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	RBM8A	Q9Y5S9	174 aa	Known RBP	11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	NTSR2	O95665	410 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	MCM2	P49736	904 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	PARP10	Q53GL7	1025 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	PRPF40B	Q6NWY9	871 aa	Known RBP	11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	LDHAL6A	Q6ZMR3	332 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	ZGPAT	Q8N5A5	531 aa	Known RBP	11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	KBTBD3	Q8NAB2	608 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	XAGE2	Q96GT9	111 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	AK7	Q96M32	723 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	UTP14A	Q9BVJ6	771 aa	Known RBP	11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	PAG1	Q9NWQ8	432 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	AKAP2	Q9Y2D5	859 aa		11.28	□□□□□ -0.6
LGI1-223	ENST00000636775	GOLIM4	O00461	696 aa		11.27	□□□□□ -0.61
LGI1-223	ENST00000636775	IFIT1	P09914	478 aa	Known RBP	11.27	□□□□□ -0.61
LGI1-223	ENST00000636775	HCLS1	P14317	486 aa	Predicted RBP	11.27	□□□□□ -0.61
LGI1-223	ENST00000636775	MCM4	P33991	863 aa		11.27	□□□□□ -0.61
LGI1-223	ENST00000636775	VGLL2	Q8N8G2	317 aa		11.27	□□□□□ -0.61
LGI1-223	ENST00000636775	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
LGI1-223	ENST00000636775	TNPO1	Q92973	898 aa	Known RBP	11.27	□□□□□ -0.61
LGI1-223	ENST00000636775	TTC14	Q96N46	770 aa		11.27	□□□□□ -0.61
LGI1-223	ENST00000636775	ADCK5	Q3MIX3	580 aa		11.26	□□□□□ -0.61
LGI1-223	ENST00000636775	METTL24	Q5JXM2	366 aa		11.26	□□□□□ -0.61
LGI1-223	ENST00000636775	NOL8	Q76FK4	1167 aa	Known RBP	11.26	□□□□□ -0.61
LGI1-223	ENST00000636775	CNNM1	Q9NRU3	951 aa		11.26	□□□□□ -0.61
LGI1-223	ENST00000636775	PSD	A5PKW4	1024 aa	Predicted RBP	11.26	□□□□□ -0.61
LGI1-223	ENST00000636775	SSFA2	P28290	1259 aa		11.26	□□□□□ -0.61
LGI1-223	ENST00000636775	CUL4A	Q13619	759 aa		11.26	□□□□□ -0.61
LGI1-223	ENST00000636775	ATP2B3	Q16720	1220 aa		11.26	□□□□□ -0.61
LGI1-223	ENST00000636775	CREB3L3	Q68CJ9	461 aa		11.26	□□□□□ -0.61
LGI1-223	ENST00000636775	SMIM5	Q71RC9	77 aa		11.26	□□□□□ -0.61
LGI1-223	ENST00000636775	SEC62	Q99442	399 aa	Known RBP	11.26	□□□□□ -0.61
LGI1-223	ENST00000636775	ABCC12	Q96J65	1359 aa		11.25	□□□□□ -0.61
LGI1-223	ENST00000636775	SLC27A2	O14975	620 aa		11.25	□□□□□ -0.61
LGI1-223	ENST00000636775	TAF5L	O75529	589 aa		11.25	□□□□□ -0.61
LGI1-223	ENST00000636775	CPA1	P15085	419 aa		11.25	□□□□□ -0.61
LGI1-223	ENST00000636775	CAST	P20810	708 aa	Known RBP	11.25	□□□□□ -0.61
LGI1-223	ENST00000636775	TTC39A	Q5SRH9	613 aa		11.25	□□□□□ -0.61
LGI1-223	ENST00000636775	CCDC129	Q6ZRS4	1044 aa		11.25	□□□□□ -0.61
LGI1-223	ENST00000636775	ZNF652	Q9Y2D9	606 aa		11.25	□□□□□ -0.61
LGI1-223	ENST00000636775	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.25	□□□□□ -0.61
LGI1-223	ENST00000636775	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.25	□□□□□ -0.61
LGI1-223	ENST00000636775	KCNJ4	P48050	445 aa		11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	SCARF1	Q14162	830 aa		11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	R3HDM1	Q15032	1099 aa	Known RBP	11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	SLFNL1	Q499Z3	407 aa		11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	MCMDC2	Q4G0Z9	681 aa		11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	CCDC158	Q5M9N0	1113 aa		11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	RC3H1	Q5TC82	1133 aa	Known RBP	11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	CLEC4G	Q6UXB4	293 aa		11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	CWC22	Q9HCG8	908 aa	Known RBP	11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	RTL9	Q8NET4	1388 aa		11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	CYP2E1	P05181	493 aa	Predicted RBP	11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	AK2	P54819	239 aa		11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	GORAB	Q5T7V8	394 aa		11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	JAKMIP1	Q96N16	626 aa	Known RBP	11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	TM6SF1	Q9BZW5	370 aa		11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	BCL2L12	Q9HB09	334 aa		11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	SEC31B	Q9NQW1	1179 aa		11.24	□□□□□ -0.61
LGI1-223	ENST00000636775	PDE8B	O95263	885 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms