RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 CWC27Q6UX04 472 aaKnown RBP7.95□□□□□ -1.14
SCN1A-213ENST00000636759 FAM210AQ96ND0 272 aa7.95□□□□□ -1.14
SCN1A-213ENST00000636759 JPH2Q9BR39 696 aaPredicted RBP7.95□□□□□ -1.14
SCN1A-213ENST00000636759 TBC1D8O95759 1140 aa7.95□□□□□ -1.14
SCN1A-213ENST00000636759 NFE2L2Q16236 605 aa7.95□□□□□ -1.14
SCN1A-213ENST00000636759 SKIDA1Q1XH10 827 aa7.95□□□□□ -1.14
SCN1A-213ENST00000636759 TRIM6Q9C030 488 aaPredicted RBP7.95□□□□□ -1.14
SCN1A-213ENST00000636759 SRCIN1Q9C0H9 1055 aa7.95□□□□□ -1.14
SCN1A-213ENST00000636759 MBIPQ9NS73 344 aa7.95□□□□□ -1.14
SCN1A-213ENST00000636759 ERBB3P21860 1342 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 SIPA1L3O60292 1781 aaPredicted RBP7.94□□□□□ -1.14
SCN1A-213ENST00000636759 URI1O94763 535 aaPredicted RBP7.94□□□□□ -1.14
SCN1A-213ENST00000636759 LIG3P49916 1009 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 C11orf91Q3C1V1 193 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 ANO6Q4KMQ2 910 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 CC2D1AQ6P1N0 951 aaPredicted RBP7.94□□□□□ -1.14
SCN1A-213ENST00000636759 IL17RAQ96F46 866 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 CBX8Q9HC52 389 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 IRAK4Q9NWZ3 460 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 CHMP3Q9Y3E7 222 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 SALL3Q9BXA9 1300 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 ANKARQ7Z5J8 1434 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 CTAGE5O15320 804 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 SRGAP3O43295 1099 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 RPS6KA5O75582 802 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 HNRNPH1P31943 449 aaKnown RBP7.94□□□□□ -1.14
SCN1A-213ENST00000636759 EVCP57679 992 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 CCDC30Q5VVM6 783 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 FOXR1Q6PIV2 292 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 NME9Q86XW9 330 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 TEX11Q8IYF3 940 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 STAG1Q8WVM7 1258 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 UBXN6Q9BZV1 441 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 TNMDQ9H2S6 317 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 TCHHQ07283 1943 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 PHRF1Q9P1Y6 1649 aaKnown RBP7.94□□□□□ -1.14
SCN1A-213ENST00000636759 KIAA0232Q92628 1395 aa7.94□□□□□ -1.14
SCN1A-213ENST00000636759 ZNF165P49910 485 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 PLA2G4DQ86XP0 818 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 N4BP2L2Q92802 583 aaPredicted RBP7.93□□□□□ -1.14
SCN1A-213ENST00000636759 EFCAB8A8MWE9 144 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 ERC2O15083 957 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 PPFIA4O75335 1185 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 SASH3O75995 380 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 CUL4AQ13619 759 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 PLEKHM2Q8IWE5 1019 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.93□□□□□ -1.14
SCN1A-213ENST00000636759 THEMISQ8N1K5 641 aaPredicted RBP7.93□□□□□ -1.14
SCN1A-213ENST00000636759 C8orf58Q8NAV2 365 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 CTCFLQ8NI51 663 aaPredicted RBP7.93□□□□□ -1.14
SCN1A-213ENST00000636759 SPATS2LQ9NUQ6 558 aaKnown RBP7.93□□□□□ -1.14
SCN1A-213ENST00000636759 BECN2A8MW95 431 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 C21orf2O43822 256 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 PRKAR2BP31323 418 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 MCM6Q14566 821 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 CAMK4Q16566 473 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 CCDC144BQ3MJ40 725 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 CCDC144CPQ8IYA2 1237 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 THUMPD2Q9BTF0 503 aaKnown RBP7.93□□□□□ -1.14
SCN1A-213ENST00000636759 ZRANB1Q9UGI0 708 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 EID1Q9Y6B2 187 aa7.93□□□□□ -1.14
SCN1A-213ENST00000636759 A0A1B0GUA9 196 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 CCP110O43303 1012 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 POTEDQ86YR6 584 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 GPR161Q8N6U8 529 aaKnown RBP7.92□□□□□ -1.14
SCN1A-213ENST00000636759 DNAI1Q9UI46 699 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 SGSM2O43147 1006 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 ZSCAN22P10073 491 aaPredicted RBP7.92□□□□□ -1.14
SCN1A-213ENST00000636759 CDC25BP30305 580 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 GSDMDP57764 484 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 CKAP2LQ8IYA6 745 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 SH3GL3Q99963 347 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 CARD6Q9BX69 1037 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 AMOTL2Q9Y2J4 779 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 TTC21BQ7Z4L5 1316 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 GCFC2P16383 781 aaKnown RBP7.92□□□□□ -1.14
SCN1A-213ENST00000636759 ANAPC15P60006 121 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 TTC22Q5TAA0 569 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 ANKRD18AQ8IVF6 992 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 LRRN4CLQ8ND94 238 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 TDRD7Q8NHU6 1098 aaKnown RBP7.92□□□□□ -1.14
SCN1A-213ENST00000636759 CCDC102AQ96A19 550 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 DCTPP1Q9H773 170 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 ETAA1Q9NY74 926 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 ACEP12821 1306 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 LTN1O94822 1766 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 RGPD2P0DJD1 1756 aa7.92□□□□□ -1.14
SCN1A-213ENST00000636759 ADAMTS7Q9UKP4 1686 aa7.91□□□□□ -1.14
SCN1A-213ENST00000636759 PAX7P23759 505 aa7.91□□□□□ -1.14
SCN1A-213ENST00000636759 RBBP5Q15291 538 aaKnown RBP7.91□□□□□ -1.14
SCN1A-213ENST00000636759 ERCC4Q92889 916 aaPredicted RBP7.91□□□□□ -1.14
SCN1A-213ENST00000636759 EMILIN1Q9Y6C2 1016 aa7.91□□□□□ -1.14
SCN1A-213ENST00000636759 RTL1A6NKG5 1358 aa7.91□□□□□ -1.14
SCN1A-213ENST00000636759 LMO7Q8WWI1 1683 aa7.91□□□□□ -1.14
SCN1A-213ENST00000636759 CAMTA1Q9Y6Y1 1673 aa7.91□□□□□ -1.14
SCN1A-213ENST00000636759 ARID5BQ14865 1188 aa7.91□□□□□ -1.14
SCN1A-213ENST00000636759 LRRFIP1Q32MZ4 808 aaKnown RBP7.91□□□□□ -1.14
SCN1A-213ENST00000636759 NUTM1Q86Y26 1132 aa7.91□□□□□ -1.14
SCN1A-213ENST00000636759 ODF2LQ9ULJ1 636 aa7.91□□□□□ -1.14
SCN1A-213ENST00000636759 EBAG9O00559 213 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms