RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 USP17L10C9JJH3 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 USP17L13C9JLJ4 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 USP17L12C9JPN9 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 USP17L11C9JVI0 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 USP17L21D6R901 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 USP17L18D6R9N7 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 USP17L22D6RA61 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 USP17L17D6RBQ6 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 USP17L19D6RCP7 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 USP17L20D6RJB6 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 CD46P15529 392 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 MAPK1P28482 360 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 IGBP1P78318 339 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 USP17L24Q0WX57 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 ECM1Q16610 540 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 USP17L2Q6R6M4 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 USP17L1Q7RTZ2 530 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.11□□□□□ -1.59
CLN5-214ENST00000636705 CLP1Q92989 425 aaKnown RBP5.11□□□□□ -1.59
CLN5-214ENST00000636705 PNMA3Q9UL41 463 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 SPG7Q9UQ90 795 aa5.11□□□□□ -1.59
CLN5-214ENST00000636705 RTL1A6NKG5 1358 aa5.1□□□□□ -1.59
CLN5-214ENST00000636705 ADCY9O60503 1353 aa5.1□□□□□ -1.59
CLN5-214ENST00000636705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.1□□□□□ -1.59
CLN5-214ENST00000636705 ABL1P00519 1130 aa5.1□□□□□ -1.59
CLN5-214ENST00000636705 CENPBP07199 599 aaPredicted RBP5.1□□□□□ -1.59
CLN5-214ENST00000636705 PRELPP51888 382 aa5.1□□□□□ -1.59
CLN5-214ENST00000636705 MRPL50Q8N5N7 158 aaKnown RBP5.1□□□□□ -1.59
CLN5-214ENST00000636705 SGSM3Q96HU1 749 aa5.1□□□□□ -1.59
CLN5-214ENST00000636705 PRDM10Q9NQV6 1147 aa5.1□□□□□ -1.59
CLN5-214ENST00000636705 RNF19AQ9NV58 838 aa5.1□□□□□ -1.59
CLN5-214ENST00000636705 CCDC87Q9NVE4 849 aa5.1□□□□□ -1.59
CLN5-214ENST00000636705 GABBR1Q9UBS5 961 aa5.1□□□□□ -1.59
CLN5-214ENST00000636705 QRICH2Q9H0J4 1663 aa5.1□□□□□ -1.59
CLN5-214ENST00000636705 NUDT18Q6ZVK8 323 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 APBB1IPQ7Z5R6 666 aaPredicted RBP5.09□□□□□ -1.59
CLN5-214ENST00000636705 IGSF1Q8N6C5 1336 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 JMYQ8N9B5 988 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 SMC1BQ8NDV3 1235 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 KLRG1Q96E93 195 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 ASB16Q96NS5 453 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 ACBD3Q9H3P7 528 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 ZSWIM4Q9H7M6 989 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 AKAP12Q02952 1782 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 CCDC194A0A1B0GVG4 234 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 NEFLP07196 543 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 HSP90AB1P08238 724 aaKnown RBP5.09□□□□□ -1.59
CLN5-214ENST00000636705 PTK7Q13308 1070 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 TNS4Q8IZW8 715 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 METTL14Q9HCE5 456 aaKnown RBP5.09□□□□□ -1.59
CLN5-214ENST00000636705 FAN1Q9Y2M0 1017 aa5.09□□□□□ -1.59
CLN5-214ENST00000636705 MAP3K19Q56UN5 1328 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 FAM196BA6NMK8 535 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 ATP2B1P20020 1258 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 TRAPPC3LQ5T215 181 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 PMM1Q92871 262 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 CAPN10Q9HC96 672 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 CHPF2Q9P2E5 772 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 PDZRN3Q9UPQ7 1066 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 PAPPAQ13219 1627 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 NFAT5O94916 1531 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 PALLDQ8WX93 1383 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 SBF2Q86WG5 1849 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 COL18A1P39060 1754 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 QSER1Q2KHR3 1735 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 DNAJB2P25686 324 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 HOXC9P31274 260 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 SOX11P35716 441 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 TMF1P82094 1093 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 MTMR3Q13615 1198 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 SLFNL1Q499Z3 407 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 RC3H1Q5TC82 1133 aaKnown RBP5.08□□□□□ -1.6
CLN5-214ENST00000636705 NME9Q86XW9 330 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 RTCBQ9Y3I0 505 aaKnown RBP5.08□□□□□ -1.6
CLN5-214ENST00000636705 PARP3Q9Y6F1 533 aa5.08□□□□□ -1.6
CLN5-214ENST00000636705 MRPL42Q9Y6G3 142 aaKnown RBP5.08□□□□□ -1.6
CLN5-214ENST00000636705 DNAJA1P31689 397 aaKnown RBP5.07□□□□□ -1.6
CLN5-214ENST00000636705 ARHGAP27Q6ZUM4 889 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 NUTM1Q86Y26 1132 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 DNAJC5GQ8N7S2 189 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 FAM174AQ8TBP5 190 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 HLA-CQ95604 372 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 L3MBTL2Q969R5 705 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 LTV1Q96GA3 475 aaPredicted RBP5.07□□□□□ -1.6
CLN5-214ENST00000636705 CARD11Q9BXL7 1154 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 PIM2Q9P1W9 311 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 CD163L1Q9NR16 1453 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 C10orf71Q711Q0 1435 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 GOLGA8CPA6NN73 597 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 USP17L5A8MUK1 530 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 P4HBP07237 508 aaKnown RBP5.07□□□□□ -1.6
CLN5-214ENST00000636705 ARHGAP4P98171 946 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 FANCCQ00597 558 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 FOXD4L6Q3SYB3 417 aaPredicted RBP5.07□□□□□ -1.6
CLN5-214ENST00000636705 EAPPQ56P03 285 aaPredicted RBP5.07□□□□□ -1.6
CLN5-214ENST00000636705 MSL1Q68DK7 614 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 FOXD4L3Q6VB84 417 aaPredicted RBP5.07□□□□□ -1.6
CLN5-214ENST00000636705 MPRIPQ6WCQ1 1025 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 RPUSD2Q8IZ73 545 aaKnown RBP5.07□□□□□ -1.6
CLN5-214ENST00000636705 TSC1Q92574 1164 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms