RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337	PITPNM2	Q9BZ72	1349 aa		13.13	□□□□□ -0.31
SPTAN1-231	ENST00000636337	SCN9A	Q15858	1988 aa		13.12	□□□□□ -0.31
SPTAN1-231	ENST00000636337	MYL6B	P14649	208 aa		13.12	□□□□□ -0.31
SPTAN1-231	ENST00000636337	TCIRG1	Q13488	830 aa		13.12	□□□□□ -0.31
SPTAN1-231	ENST00000636337	PARP10	Q53GL7	1025 aa		13.12	□□□□□ -0.31
SPTAN1-231	ENST00000636337	C6orf229	H3BNL8	230 aa		13.11	□□□□□ -0.31
SPTAN1-231	ENST00000636337	VIL1	P09327	827 aa	Known RBP	13.11	□□□□□ -0.31
SPTAN1-231	ENST00000636337	HCLS1	P14317	486 aa	Predicted RBP	13.11	□□□□□ -0.31
SPTAN1-231	ENST00000636337	ZNF280A	P59817	542 aa	Predicted RBP	13.11	□□□□□ -0.31
SPTAN1-231	ENST00000636337	SLC4A8	Q2Y0W8	1093 aa		13.11	□□□□□ -0.31
SPTAN1-231	ENST00000636337	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.11	□□□□□ -0.31
SPTAN1-231	ENST00000636337	MCM10	Q7L590	875 aa		13.11	□□□□□ -0.31
SPTAN1-231	ENST00000636337	EFCC1	Q9HA90	598 aa		13.11	□□□□□ -0.31
SPTAN1-231	ENST00000636337	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.11	□□□□□ -0.31
SPTAN1-231	ENST00000636337	PTPN12	Q05209	780 aa	Known RBP	13.1	□□□□□ -0.31
SPTAN1-231	ENST00000636337	SPRYD7	Q5W111	196 aa		13.1	□□□□□ -0.31
SPTAN1-231	ENST00000636337	TMC4	Q7Z404	712 aa		13.1	□□□□□ -0.31
SPTAN1-231	ENST00000636337	IFNL1	Q8IU54	200 aa		13.1	□□□□□ -0.31
SPTAN1-231	ENST00000636337	DPF3	Q92784	378 aa		13.1	□□□□□ -0.31
SPTAN1-231	ENST00000636337	PHACTR3	Q96KR7	559 aa		13.1	□□□□□ -0.31
SPTAN1-231	ENST00000636337	POLL	Q9UGP5	575 aa		13.1	□□□□□ -0.31
SPTAN1-231	ENST00000636337	MYC	P01106	439 aa	Predicted RBP	13.09	□□□□□ -0.31
SPTAN1-231	ENST00000636337	NF2	P35240	595 aa		13.09	□□□□□ -0.31
SPTAN1-231	ENST00000636337	SLC9C1	Q4G0N8	1177 aa		13.09	□□□□□ -0.31
SPTAN1-231	ENST00000636337	RTF1	Q92541	710 aa	Known RBP	13.09	□□□□□ -0.31
SPTAN1-231	ENST00000636337	MYOZ2	Q9NPC6	264 aa		13.09	□□□□□ -0.31
SPTAN1-231	ENST00000636337	KDM3B	Q7LBC6	1761 aa		13.08	□□□□□ -0.32
SPTAN1-231	ENST00000636337	MANSC4	A6NHS7	340 aa	Predicted RBP	13.08	□□□□□ -0.32
SPTAN1-231	ENST00000636337	SOX1	O00570	391 aa	Predicted RBP	13.08	□□□□□ -0.32
SPTAN1-231	ENST00000636337	CAP1	Q01518	475 aa		13.08	□□□□□ -0.32
SPTAN1-231	ENST00000636337	PRKG1	Q13976	671 aa		13.08	□□□□□ -0.32
SPTAN1-231	ENST00000636337	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.08	□□□□□ -0.32
SPTAN1-231	ENST00000636337	EYA3	Q99504	573 aa		13.08	□□□□□ -0.32
SPTAN1-231	ENST00000636337	PRO3102	Q9H379	93 aa		13.08	□□□□□ -0.32
SPTAN1-231	ENST00000636337	MIS18A	Q9NYP9	233 aa		13.08	□□□□□ -0.32
SPTAN1-231	ENST00000636337	COL3A1	P02461	1466 aa	Predicted RBP	13.08	□□□□□ -0.32
SPTAN1-231	ENST00000636337	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
SPTAN1-231	ENST00000636337	PRKAR2B	P31323	418 aa		13.07	□□□□□ -0.32
SPTAN1-231	ENST00000636337	GPSM2	P81274	684 aa		13.07	□□□□□ -0.32
SPTAN1-231	ENST00000636337	DCTN1	Q14203	1278 aa		13.07	□□□□□ -0.32
SPTAN1-231	ENST00000636337	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.07	□□□□□ -0.32
SPTAN1-231	ENST00000636337	ARMC9	Q7Z3E5	817 aa		13.07	□□□□□ -0.32
SPTAN1-231	ENST00000636337	NBPF11	Q86T75	865 aa		13.07	□□□□□ -0.32
SPTAN1-231	ENST00000636337	AGBL3	Q8NEM8	1001 aa		13.07	□□□□□ -0.32
SPTAN1-231	ENST00000636337	LRCH3	Q96II8	777 aa		13.07	□□□□□ -0.32
SPTAN1-231	ENST00000636337	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.07	□□□□□ -0.32
SPTAN1-231	ENST00000636337	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.07	□□□□□ -0.32
SPTAN1-231	ENST00000636337	WTIP	A6NIX2	430 aa	Predicted RBP	13.06	□□□□□ -0.32
SPTAN1-231	ENST00000636337	USP17L8	P0C7I0	530 aa		13.06	□□□□□ -0.32
SPTAN1-231	ENST00000636337	INHBE	P58166	350 aa		13.06	□□□□□ -0.32
SPTAN1-231	ENST00000636337	CRHR2	Q13324	411 aa		13.06	□□□□□ -0.32
SPTAN1-231	ENST00000636337	PTCH2	Q9Y6C5	1203 aa		13.06	□□□□□ -0.32
SPTAN1-231	ENST00000636337	VCAN	P13611	3396 aa		13.05	□□□□□ -0.32
SPTAN1-231	ENST00000636337		G3V3G9	751 aa		13.05	□□□□□ -0.32
SPTAN1-231	ENST00000636337	SP3	Q02447	781 aa		13.05	□□□□□ -0.32
SPTAN1-231	ENST00000636337	NBPF9	Q3BBW0	867 aa		13.05	□□□□□ -0.32
SPTAN1-231	ENST00000636337	DCAF8	Q5TAQ9	597 aa		13.05	□□□□□ -0.32
SPTAN1-231	ENST00000636337	TBC1D16	Q8TBP0	767 aa		13.05	□□□□□ -0.32
SPTAN1-231	ENST00000636337	CELF1	Q92879	486 aa	Known RBP	13.05	□□□□□ -0.32
SPTAN1-231	ENST00000636337	TAF7	Q15545	349 aa	Predicted RBP	13.04	□□□□□ -0.32
SPTAN1-231	ENST00000636337	LDLRAD1	Q5T700	205 aa		13.04	□□□□□ -0.32
SPTAN1-231	ENST00000636337	NECTIN2	Q92692	538 aa		13.04	□□□□□ -0.32
SPTAN1-231	ENST00000636337	GML	Q99445	158 aa		13.04	□□□□□ -0.32
SPTAN1-231	ENST00000636337	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.04	□□□□□ -0.32
SPTAN1-231	ENST00000636337	TRMT112	Q9UI30	125 aa	Known RBP	13.04	□□□□□ -0.32
SPTAN1-231	ENST00000636337	ANGEL1	Q9UNK9	670 aa	Known RBP	13.04	□□□□□ -0.32
SPTAN1-231	ENST00000636337	COL4A1	P02462	1669 aa		13.03	□□□□□ -0.32
SPTAN1-231	ENST00000636337	SLC10A4	Q96EP9	437 aa		13.03	□□□□□ -0.32
SPTAN1-231	ENST00000636337	RSPH6A	Q9H0K4	717 aa		13.03	□□□□□ -0.32
SPTAN1-231	ENST00000636337	FZD1	Q9UP38	647 aa		13.03	□□□□□ -0.32
SPTAN1-231	ENST00000636337	PSME4	Q14997	1843 aa		13.03	□□□□□ -0.32
SPTAN1-231	ENST00000636337	SH3TC1	Q8TE82	1336 aa		13.03	□□□□□ -0.32
SPTAN1-231	ENST00000636337	LAMB1	P07942	1786 aa		13.02	□□□□□ -0.32
SPTAN1-231	ENST00000636337		A0A1W2PPC1	479 aa		13.02	□□□□□ -0.33
SPTAN1-231	ENST00000636337	ZBTB48	P10074	688 aa	Predicted RBP	13.02	□□□□□ -0.33
SPTAN1-231	ENST00000636337	NLRP10	Q86W26	655 aa		13.02	□□□□□ -0.33
SPTAN1-231	ENST00000636337	SH3TC2	Q8TF17	1288 aa		13.02	□□□□□ -0.33
SPTAN1-231	ENST00000636337	ZNF428	Q96B54	188 aa		13.02	□□□□□ -0.33
SPTAN1-231	ENST00000636337	WNK4	Q96J92	1243 aa		13.02	□□□□□ -0.33
SPTAN1-231	ENST00000636337	THUMPD2	Q9BTF0	503 aa	Known RBP	13.02	□□□□□ -0.33
SPTAN1-231	ENST00000636337	UFL1	O94874	794 aa		13.01	□□□□□ -0.33
SPTAN1-231	ENST00000636337	CC2D1B	Q5T0F9	858 aa	Known RBP	13.01	□□□□□ -0.33
SPTAN1-231	ENST00000636337	OTUD7B	Q6GQQ9	843 aa		13.01	□□□□□ -0.33
SPTAN1-231	ENST00000636337	SHISA4	Q96DD7	197 aa		13.01	□□□□□ -0.33
SPTAN1-231	ENST00000636337	CLMN	Q96JQ2	1002 aa		13.01	□□□□□ -0.33
SPTAN1-231	ENST00000636337	ARHGEF6	Q15052	776 aa		13	□□□□□ -0.33
SPTAN1-231	ENST00000636337	HTATIP2	Q9BUP3	242 aa		13	□□□□□ -0.33
SPTAN1-231	ENST00000636337	NR2E3	Q9Y5X4	410 aa		13	□□□□□ -0.33
SPTAN1-231	ENST00000636337	ERBB4	Q15303	1308 aa		12.99	□□□□□ -0.33
SPTAN1-231	ENST00000636337	WNT10B	O00744	389 aa		12.99	□□□□□ -0.33
SPTAN1-231	ENST00000636337	ZBTB7B	O15156	539 aa	Predicted RBP	12.99	□□□□□ -0.33
SPTAN1-231	ENST00000636337	SASH1	O94885	1247 aa		12.99	□□□□□ -0.33
SPTAN1-231	ENST00000636337	EIF4A1	P60842	406 aa	Known RBP	12.99	□□□□□ -0.33
SPTAN1-231	ENST00000636337	DEFB123	Q8N688	67 aa		12.99	□□□□□ -0.33
SPTAN1-231	ENST00000636337	STXBP5L	Q9Y2K9	1186 aa		12.99	□□□□□ -0.33
SPTAN1-231	ENST00000636337	USP17L3	A6NCW0	530 aa		12.98	□□□□□ -0.33
SPTAN1-231	ENST00000636337	USP17L4	A6NCW7	530 aa		12.98	□□□□□ -0.33
SPTAN1-231	ENST00000636337	HTATSF1	O43719	755 aa	Known RBP	12.98	□□□□□ -0.33
SPTAN1-231	ENST00000636337	HSP90AB3P	Q58FF7	597 aa		12.98	□□□□□ -0.33
SPTAN1-231	ENST00000636337	ANKRD13D	Q6ZTN6	518 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms