RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 KCNQ3O43525 872 aa17.32■□□□□ 0.36
CACNA1A-220ENST00000635988 LTKP29376 864 aa17.32■□□□□ 0.36
CACNA1A-220ENST00000635988 KCNJ6P48051 423 aa17.32■□□□□ 0.36
CACNA1A-220ENST00000635988 CWF19L2Q2TBE0 894 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-220ENST00000635988 ABTB2Q8N961 1025 aa17.32■□□□□ 0.36
CACNA1A-220ENST00000635988 TLR7Q9NYK1 1049 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-220ENST00000635988 NRDCO43847 1150 aa17.32■□□□□ 0.36
CACNA1A-220ENST00000635988 PFKFB2O60825 505 aa17.32■□□□□ 0.36
CACNA1A-220ENST00000635988 SNW1Q13573 536 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-220ENST00000635988 FBXO38Q6PIJ6 1188 aa17.32■□□□□ 0.36
CACNA1A-220ENST00000635988 DDX11Q96FC9 970 aa17.32■□□□□ 0.36
CACNA1A-220ENST00000635988 MRC1P22897 1456 aa17.32■□□□□ 0.36
CACNA1A-220ENST00000635988 ELF2Q15723 593 aa17.31■□□□□ 0.36
CACNA1A-220ENST00000635988 CCDC150Q8NCX0 1101 aa17.31■□□□□ 0.36
CACNA1A-220ENST00000635988 ENGASEQ8NFI3 743 aa17.31■□□□□ 0.36
CACNA1A-220ENST00000635988 EID1Q9Y6B2 187 aa17.31■□□□□ 0.36
CACNA1A-220ENST00000635988 ATP5JP18859 108 aa17.31■□□□□ 0.36
CACNA1A-220ENST00000635988 IP6K1Q92551 441 aa17.31■□□□□ 0.36
CACNA1A-220ENST00000635988 KAZALD1Q96I82 304 aa17.31■□□□□ 0.36
CACNA1A-220ENST00000635988 SLC26A8Q96RN1 970 aa17.31■□□□□ 0.36
CACNA1A-220ENST00000635988 L2HGDHQ9H9P8 463 aa17.31■□□□□ 0.36
CACNA1A-220ENST00000635988 TRMT1Q9NXH9 659 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-220ENST00000635988 TBX22Q9Y458 520 aa17.31■□□□□ 0.36
CACNA1A-220ENST00000635988 NCAPD2Q15021 1401 aa17.31■□□□□ 0.36
CACNA1A-220ENST00000635988 PSDA5PKW4 1024 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-220ENST00000635988 SCRN1Q12765 414 aa17.3■□□□□ 0.36
CACNA1A-220ENST00000635988 BMS1Q14692 1282 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-220ENST00000635988 PLEKHO1Q53GL0 409 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-220ENST00000635988 MARF1Q9Y4F3 1742 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-220ENST00000635988 CEBPZQ03701 1054 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-220ENST00000635988 GOLPH3LQ9H4A5 285 aa17.3■□□□□ 0.36
CACNA1A-220ENST00000635988 OVOS2A0A0G2JMS6 1433 aa17.3■□□□□ 0.36
CACNA1A-220ENST00000635988 ZNF530Q6P9A1 599 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-220ENST00000635988 AOPEPQ8N6M6 819 aa17.29■□□□□ 0.36
CACNA1A-220ENST00000635988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-220ENST00000635988 LMO7Q8WWI1 1683 aa17.29■□□□□ 0.36
CACNA1A-220ENST00000635988 RGPD8O14715 1765 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-220ENST00000635988 ZRSR1Q15695 479 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-220ENST00000635988 AMOTQ4VCS5 1084 aa17.29■□□□□ 0.36
CACNA1A-220ENST00000635988 FSIP1Q8NA03 581 aa17.29■□□□□ 0.36
CACNA1A-220ENST00000635988 NSUN7Q8NE18 718 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-220ENST00000635988 BPIFA3Q9BQP9 254 aa17.29■□□□□ 0.36
CACNA1A-220ENST00000635988 HEG1Q9ULI3 1381 aa17.29■□□□□ 0.36
CACNA1A-220ENST00000635988 USP28Q96RU2 1077 aa17.28■□□□□ 0.36
CACNA1A-220ENST00000635988 CCP110O43303 1012 aa17.28■□□□□ 0.36
CACNA1A-220ENST00000635988 ME1P48163 572 aa17.28■□□□□ 0.36
CACNA1A-220ENST00000635988 TPM4P67936 248 aa17.28■□□□□ 0.36
CACNA1A-220ENST00000635988 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
CACNA1A-220ENST00000635988 NBPF6Q5VWK0 638 aa17.28■□□□□ 0.36
CACNA1A-220ENST00000635988 DHX32Q7L7V1 743 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-220ENST00000635988 NBPF4Q96M43 638 aa17.28■□□□□ 0.36
CACNA1A-220ENST00000635988 SIL1Q9H173 461 aa17.28■□□□□ 0.36
CACNA1A-220ENST00000635988 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.28■□□□□ 0.36
CACNA1A-220ENST00000635988 V9GYY5 206 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-220ENST00000635988 TSPOAP1O95153 1857 aa17.28■□□□□ 0.36
CACNA1A-220ENST00000635988 CYP21A2P08686 494 aa17.27■□□□□ 0.36
CACNA1A-220ENST00000635988 H2AFXP16104 143 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-220ENST00000635988 PROSER3Q2NL68 480 aa17.27■□□□□ 0.36
CACNA1A-220ENST00000635988 MRPS27Q92552 414 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-220ENST00000635988 A0A1W2PQ27 194 aa17.27■□□□□ 0.36
CACNA1A-220ENST00000635988 A0A1W2PQ64 194 aa17.27■□□□□ 0.36
CACNA1A-220ENST00000635988 A0A1W2PQD8 194 aa17.27■□□□□ 0.36
CACNA1A-220ENST00000635988 PTPDC1A2A3K4 754 aa17.27■□□□□ 0.36
CACNA1A-220ENST00000635988 DDX21Q9NR30 783 aaKnown RBP eCLIP17.27■□□□□ 0.36
CACNA1A-220ENST00000635988 RNMTO43148 476 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-220ENST00000635988 C1orf141Q5JVX7 400 aa17.26■□□□□ 0.35
CACNA1A-220ENST00000635988 SDF4Q9BRK5 362 aa17.26■□□□□ 0.35
CACNA1A-220ENST00000635988 MYH15Q9Y2K3 1946 aa17.26■□□□□ 0.35
CACNA1A-220ENST00000635988 SFPQP23246 707 aaKnown RBP eCLIP17.26■□□□□ 0.35
CACNA1A-220ENST00000635988 NEXNQ0ZGT2 675 aa17.26■□□□□ 0.35
CACNA1A-220ENST00000635988 E4F1Q66K89 784 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-220ENST00000635988 ADALQ6DHV7 355 aa17.26■□□□□ 0.35
CACNA1A-220ENST00000635988 MPRIPQ6WCQ1 1025 aa17.26■□□□□ 0.35
CACNA1A-220ENST00000635988 NBPF11Q86T75 865 aa17.26■□□□□ 0.35
CACNA1A-220ENST00000635988 CALCOCO1Q9P1Z2 691 aa17.26■□□□□ 0.35
CACNA1A-220ENST00000635988 ERBB3P21860 1342 aa17.25■□□□□ 0.35
CACNA1A-220ENST00000635988 COL15A1P39059 1388 aa17.25■□□□□ 0.35
CACNA1A-220ENST00000635988 TICAM2Q86XR7 235 aa17.25■□□□□ 0.35
CACNA1A-220ENST00000635988 FMR1NBQ8N0W7 255 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-220ENST00000635988 PPP1R13BQ96KQ4 1090 aa17.25■□□□□ 0.35
CACNA1A-220ENST00000635988 AGXT2Q9BYV1 514 aa17.25■□□□□ 0.35
CACNA1A-220ENST00000635988 COPRSQ9NQ92 184 aa17.25■□□□□ 0.35
CACNA1A-220ENST00000635988 CCDC93Q567U6 631 aa17.25■□□□□ 0.35
CACNA1A-220ENST00000635988 TIGD1Q96MW7 591 aa17.25■□□□□ 0.35
CACNA1A-220ENST00000635988 RTEL1Q9NZ71 1219 aa17.24■□□□□ 0.35
CACNA1A-220ENST00000635988 ZNF609O15014 1411 aa17.24■□□□□ 0.35
CACNA1A-220ENST00000635988 EDC3Q96F86 508 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-220ENST00000635988 NOL10Q9BSC4 688 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-220ENST00000635988 FTOQ9C0B1 505 aaKnown RBP eCLIP17.24■□□□□ 0.35
CACNA1A-220ENST00000635988 ARGLU1Q9NWB6 273 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-220ENST00000635988 KIAA1468Q9P260 1216 aa17.24■□□□□ 0.35
CACNA1A-220ENST00000635988 SH3TC1Q8TE82 1336 aa17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 SALL1Q9NSC2 1324 aa17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 CTDNEP1O95476 244 aa17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 TNNI3KQ59H18 835 aa17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 HAUS7Q99871 368 aa17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 ZNF446Q9NWS9 450 aa17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 DBNLQ9UJU6 430 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms