RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 SUV39H2Q9H5I1 410 aa7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 RUBCNLQ9H714 662 aa7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 NPHS2Q9NP85 383 aa7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 PDS5BQ9NTI5 1447 aa7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 PHF20L1A8MW92 1017 aa7.65□□□□□ -1.18
TRAPPC9-216ENST00000634178 USP17L7P0C7H9 530 aa7.65□□□□□ -1.18
TRAPPC9-216ENST00000634178 LAMC2Q13753 1193 aa7.65□□□□□ -1.18
TRAPPC9-216ENST00000634178 CCINQ13939 588 aa7.65□□□□□ -1.18
TRAPPC9-216ENST00000634178 USP48Q86UV5 1035 aa7.65□□□□□ -1.18
TRAPPC9-216ENST00000634178 C1orf127Q8N9H9 656 aa7.65□□□□□ -1.18
TRAPPC9-216ENST00000634178 TINF2Q9BSI4 451 aa7.65□□□□□ -1.18
TRAPPC9-216ENST00000634178 BCO2Q9BYV7 579 aa7.65□□□□□ -1.18
TRAPPC9-216ENST00000634178 ZFYVE1Q9HBF4 777 aa7.65□□□□□ -1.18
TRAPPC9-216ENST00000634178 GGT7Q9UJ14 662 aa7.65□□□□□ -1.18
TRAPPC9-216ENST00000634178 DDX41Q9UJV9 622 aaKnown RBP7.65□□□□□ -1.18
TRAPPC9-216ENST00000634178 EREGO14944 169 aa7.64□□□□□ -1.19
TRAPPC9-216ENST00000634178 ATXN7O15265 892 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC9-216ENST00000634178 FAM157BP0CG42 384 aa7.64□□□□□ -1.19
TRAPPC9-216ENST00000634178 ATP2B1P20020 1258 aa7.64□□□□□ -1.19
TRAPPC9-216ENST00000634178 IRS1P35568 1242 aa7.64□□□□□ -1.19
TRAPPC9-216ENST00000634178 ARMC5Q96C12 935 aa7.64□□□□□ -1.19
TRAPPC9-216ENST00000634178 INPP5FQ9Y2H2 1132 aa7.64□□□□□ -1.19
TRAPPC9-216ENST00000634178 KIF21AQ7Z4S6 1674 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 BAZ1AQ9NRL2 1556 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 SOBPA7XYQ1 873 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 H7C1W4 665 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 XRCC5P13010 732 aaKnown RBP7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 KIAA0319Q5VV43 1072 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 NXPE4Q6UWF7 544 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 PI16Q6UXB8 463 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 PNMA5Q96PV4 448 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 EHD4Q9H223 541 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 CHRDQ9H2X0 955 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 ACBD3Q9H3P7 528 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 CNTN3Q9P232 1028 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 PRKAG2Q9UGJ0 569 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 PCDHGC4Q9Y5F7 938 aa7.63□□□□□ -1.19
TRAPPC9-216ENST00000634178 MAN1A2O60476 641 aa7.62□□□□□ -1.19
TRAPPC9-216ENST00000634178 POLR3DP05423 398 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC9-216ENST00000634178 CANXP27824 592 aaKnown RBP7.62□□□□□ -1.19
TRAPPC9-216ENST00000634178 ARID5AQ03989 594 aa7.62□□□□□ -1.19
TRAPPC9-216ENST00000634178 PWP1Q13610 501 aa7.62□□□□□ -1.19
TRAPPC9-216ENST00000634178 NOC4LQ9BVI4 516 aaKnown RBP7.62□□□□□ -1.19
TRAPPC9-216ENST00000634178 ZCCHC2Q9C0B9 1178 aaKnown RBP7.62□□□□□ -1.19
TRAPPC9-216ENST00000634178 PSAPP07602 524 aa7.61□□□□□ -1.19
TRAPPC9-216ENST00000634178 RLBP1P12271 317 aa7.61□□□□□ -1.19
TRAPPC9-216ENST00000634178 GRNP28799 593 aaKnown RBP7.61□□□□□ -1.19
TRAPPC9-216ENST00000634178 OR13H1Q8NG92 308 aa7.61□□□□□ -1.19
TRAPPC9-216ENST00000634178 GMCL1Q96IK5 515 aa7.61□□□□□ -1.19
TRAPPC9-216ENST00000634178 GMLQ99445 158 aa7.61□□□□□ -1.19
TRAPPC9-216ENST00000634178 PPM1HQ9ULR3 514 aa7.61□□□□□ -1.19
TRAPPC9-216ENST00000634178 PEG3Q9GZU2 1588 aa7.61□□□□□ -1.19
TRAPPC9-216ENST00000634178 WDR62O43379 1518 aa7.61□□□□□ -1.19
TRAPPC9-216ENST00000634178 SMARCA4P51532 1647 aa7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 EFSO43281 561 aa7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 SASH3O75995 380 aa7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 RARAP10276 462 aa7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 NEUROD1Q13562 356 aa7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 GRM2Q14416 872 aa7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 SOGA3Q5TF21 947 aa7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 MEI1Q5TIA1 1274 aa7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 RIPOR1Q6ZS17 1223 aa7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 GSX2Q9BZM3 304 aa7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 NUCKS1Q9H1E3 243 aaKnown RBP7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 DNMT3LQ9UJW3 386 aa7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 TTF2Q9UNY4 1162 aaKnown RBP7.6□□□□□ -1.19
TRAPPC9-216ENST00000634178 A0A1W2PP55 124 aa7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 KHNYNO15037 678 aaKnown RBP7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 HMGB1P09429 215 aaKnown RBP7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 SOX18P35713 384 aa7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 KCNMA1Q12791 1236 aa7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 HYAL2Q12891 473 aa7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 ZNF394Q53GI3 561 aa7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 PRPF40BQ6NWY9 871 aaKnown RBP7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 RELL1Q8IUW5 271 aa7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 ANKRD24Q8TF21 1146 aa7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 SPATA32Q96LK8 384 aa7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 RSRP1Q9BUV0 290 aa7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 SRA1Q9HD15 236 aaKnown RBP7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 MRC2Q9UBG0 1479 aa7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 BAZ1BQ9UIG0 1483 aaKnown RBP7.59□□□□□ -1.19
TRAPPC9-216ENST00000634178 MAP3K6O95382 1288 aa7.58□□□□□ -1.2
TRAPPC9-216ENST00000634178 DNAJA1P31689 397 aaKnown RBP7.58□□□□□ -1.2
TRAPPC9-216ENST00000634178 RACK1P63244 317 aaKnown RBP7.58□□□□□ -1.2
TRAPPC9-216ENST00000634178 SFSWAPQ12872 951 aaKnown RBP7.58□□□□□ -1.2
TRAPPC9-216ENST00000634178 ERMP1Q7Z2K6 904 aa7.58□□□□□ -1.2
TRAPPC9-216ENST00000634178 KRT25Q7Z3Z0 450 aa7.58□□□□□ -1.2
TRAPPC9-216ENST00000634178 NCAPG2Q86XI2 1143 aa7.58□□□□□ -1.2
TRAPPC9-216ENST00000634178 CUEDC1Q9NWM3 386 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC9-216ENST00000634178 MARK1Q9P0L2 795 aa7.58□□□□□ -1.2
TRAPPC9-216ENST00000634178 SALL4Q9UJQ4 1053 aa7.58□□□□□ -1.2
TRAPPC9-216ENST00000634178 PCDHGB7Q9Y5F8 929 aa7.58□□□□□ -1.2
TRAPPC9-216ENST00000634178 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC9-216ENST00000634178 MMP20O60882 483 aa7.57□□□□□ -1.2
TRAPPC9-216ENST00000634178 TARSP26639 723 aaKnown RBP7.57□□□□□ -1.2
TRAPPC9-216ENST00000634178 FCGRTP55899 365 aa7.57□□□□□ -1.2
TRAPPC9-216ENST00000634178 PLAURQ03405 335 aa7.57□□□□□ -1.2
TRAPPC9-216ENST00000634178 TNP2Q05952 138 aa7.57□□□□□ -1.2
TRAPPC9-216ENST00000634178 DTHD1Q6ZMT9 781 aa7.57□□□□□ -1.2
TRAPPC9-216ENST00000634178 SPACA7Q96KW9 195 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms