RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 ERVV-1B6SEH8 477 aa11.4□□□□□ -0.58
TCF4-258ENST00000627320 GPSM2P81274 684 aa11.4□□□□□ -0.58
TCF4-258ENST00000627320 PRKG1Q13976 671 aa11.4□□□□□ -0.58
TCF4-258ENST00000627320 POLA2Q14181 598 aa11.4□□□□□ -0.58
TCF4-258ENST00000627320 GIGYF2Q6Y7W6 1299 aaKnown RBP11.4□□□□□ -0.58
TCF4-258ENST00000627320 KIF6Q6ZMV9 814 aa11.4□□□□□ -0.58
TCF4-258ENST00000627320 LRP10Q7Z4F1 713 aa11.4□□□□□ -0.58
TCF4-258ENST00000627320 SUPT20HQ8NEM7 779 aa11.4□□□□□ -0.58
TCF4-258ENST00000627320 CELF1Q92879 486 aaKnown RBP11.4□□□□□ -0.58
TCF4-258ENST00000627320 NLRP3Q96P20 1036 aa11.4□□□□□ -0.58
TCF4-258ENST00000627320 RANBP2P49792 3224 aaKnown RBP11.39□□□□□ -0.59
TCF4-258ENST00000627320 PER1O15534 1290 aaPredicted RBP11.39□□□□□ -0.59
TCF4-258ENST00000627320 WTIPA6NIX2 430 aaPredicted RBP11.38□□□□□ -0.59
TCF4-258ENST00000627320 DLL1O00548 723 aa11.38□□□□□ -0.59
TCF4-258ENST00000627320 RGL2O15211 777 aa11.38□□□□□ -0.59
TCF4-258ENST00000627320 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.593e-9■■■□□ 15.5
TCF4-258ENST00000627320 GRAPQ13588 217 aa11.38□□□□□ -0.59
TCF4-258ENST00000627320 SCARF1Q14162 830 aa11.38□□□□□ -0.59
TCF4-258ENST00000627320 PDIA6Q15084 440 aa11.38□□□□□ -0.59
TCF4-258ENST00000627320 SULF1Q8IWU6 871 aa11.38□□□□□ -0.59
TCF4-258ENST00000627320 GRAPLQ8TC17 118 aaPredicted RBP11.38□□□□□ -0.59
TCF4-258ENST00000627320 NECTIN2Q92692 538 aa11.38□□□□□ -0.59
TCF4-258ENST00000627320 DPF2Q92785 391 aa11.38□□□□□ -0.59
TCF4-258ENST00000627320 MXD3Q9BW11 206 aa11.38□□□□□ -0.59
TCF4-258ENST00000627320 ECM29Q5VYK3 1845 aa11.37□□□□□ -0.59
TCF4-258ENST00000627320 MYCP01106 439 aaPredicted RBP11.37□□□□□ -0.59
TCF4-258ENST00000627320 WASHC4Q2M389 1173 aa11.37□□□□□ -0.59
TCF4-258ENST00000627320 GRIPAP1Q4V328 841 aa11.37□□□□□ -0.59
TCF4-258ENST00000627320 SLC10A5Q5PT55 438 aa11.37□□□□□ -0.59
TCF4-258ENST00000627320 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
TCF4-258ENST00000627320 VPS33BQ9H267 617 aa11.37□□□□□ -0.59
TCF4-258ENST00000627320 NSFL1CQ9UNZ2 370 aaKnown RBP11.37□□□□□ -0.59
TCF4-258ENST00000627320 TRIM17Q9Y577 477 aa11.37□□□□□ -0.59
TCF4-258ENST00000627320 CUL9Q8IWT3 2517 aa11.36□□□□□ -0.59
TCF4-258ENST00000627320 C6orf229H3BNL8 230 aa11.36□□□□□ -0.59
TCF4-258ENST00000627320 FKTNO75072 461 aa11.36□□□□□ -0.59
TCF4-258ENST00000627320 EIF4A1P60842 406 aaKnown RBP11.36□□□□□ -0.59
TCF4-258ENST00000627320 PKN2Q16513 984 aaKnown RBP11.36□□□□□ -0.59
TCF4-258ENST00000627320 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
TCF4-258ENST00000627320 OTOP1Q7RTM1 612 aa11.36□□□□□ -0.59
TCF4-258ENST00000627320 PPP1R42Q7Z4L9 355 aa11.36□□□□□ -0.59
TCF4-258ENST00000627320 NLRP10Q86W26 655 aa11.36□□□□□ -0.59
TCF4-258ENST00000627320 ZNF609O15014 1411 aa11.35□□□□□ -0.59
TCF4-258ENST00000627320 ALPK3Q96L96 1907 aa11.35□□□□□ -0.59
TCF4-258ENST00000627320 NBPF9Q3BBW0 867 aa11.35□□□□□ -0.59
TCF4-258ENST00000627320 DDX46Q7L014 1031 aaKnown RBP11.35□□□□□ -0.59
TCF4-258ENST00000627320 CD99L2Q8TCZ2 262 aa11.35□□□□□ -0.59
TCF4-258ENST00000627320 RTF1Q92541 710 aaKnown RBP11.35□□□□□ -0.59
TCF4-258ENST00000627320 SSC5DA1L4H1 1573 aa11.35□□□□□ -0.59
TCF4-258ENST00000627320 H0YGN5 161 aa11.34□□□□□ -0.59
TCF4-258ENST00000627320 BBOX1O75936 387 aa11.34□□□□□ -0.59
TCF4-258ENST00000627320 EIF2S2P20042 333 aaKnown RBP11.34□□□□□ -0.59
TCF4-258ENST00000627320 TM4SF4P48230 202 aa11.34□□□□□ -0.59
TCF4-258ENST00000627320 PTPN12Q05209 780 aaKnown RBP11.34□□□□□ -0.59
TCF4-258ENST00000627320 AIMP1Q12904 312 aaKnown RBP11.34□□□□□ -0.59
TCF4-258ENST00000627320 TTLL12Q14166 644 aaPredicted RBP11.34□□□□□ -0.59
TCF4-258ENST00000627320 TAF7Q15545 349 aaPredicted RBP11.34□□□□□ -0.59
TCF4-258ENST00000627320 TBC1D16Q8TBP0 767 aa11.34□□□□□ -0.59
TCF4-258ENST00000627320 TMX4Q9H1E5 349 aaPredicted RBP11.34□□□□□ -0.59
TCF4-258ENST00000627320 IGF2BP3O00425 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
TCF4-258ENST00000627320 U2AF1L5P0DN76 240 aaPredicted RBP11.33□□□□□ -0.6
TCF4-258ENST00000627320 U2AF1Q01081 240 aaKnown RBP eCLIP11.33□□□□□ -0.6
TCF4-258ENST00000627320 PARP10Q53GL7 1025 aa11.33□□□□□ -0.6
TCF4-258ENST00000627320 CHRDL2Q6WN34 429 aa11.33□□□□□ -0.6
TCF4-258ENST00000627320 OTUD5Q96G74 571 aa11.33□□□□□ -0.6
TCF4-258ENST00000627320 A0A1B0GUL6 1792 aa11.32□□□□□ -0.6
TCF4-258ENST00000627320 SASH1O94885 1247 aa11.32□□□□□ -0.6
TCF4-258ENST00000627320 VIL1P09327 827 aaKnown RBP11.32□□□□□ -0.6
TCF4-258ENST00000627320 KRT24Q2M2I5 525 aa11.32□□□□□ -0.6
TCF4-258ENST00000627320 MYOZ2Q9NPC6 264 aa11.32□□□□□ -0.6
TCF4-258ENST00000627320 SEC31BQ9NQW1 1179 aa11.32□□□□□ -0.6
TCF4-258ENST00000627320 TRMT112Q9UI30 125 aaKnown RBP11.32□□□□□ -0.6
TCF4-258ENST00000627320 A0A0C4DFX4 3053 aa11.32□□□□□ -0.6
TCF4-258ENST00000627320 ECM2O94769 699 aaPredicted RBP11.31□□□□□ -0.6
TCF4-258ENST00000627320 RPS12P25398 132 aaKnown RBP11.31□□□□□ -0.6
TCF4-258ENST00000627320 ZNF280AP59817 542 aaPredicted RBP11.31□□□□□ -0.6
TCF4-258ENST00000627320 XAGE3Q8WTP9 111 aa11.31□□□□□ -0.6
TCF4-258ENST00000627320 FAM89AQ96GI7 184 aa11.31□□□□□ -0.6
TCF4-258ENST00000627320 CLMNQ96JQ2 1002 aa11.31□□□□□ -0.6
TCF4-258ENST00000627320 RBM27Q9P2N5 1060 aaKnown RBP11.31□□□□□ -0.6
TCF4-258ENST00000627320 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
TCF4-258ENST00000627320 MYH3P11055 1940 aa11.31□□□□□ -0.6
TCF4-258ENST00000627320 LAMA3Q16787 3333 aa11.3□□□□□ -0.6
TCF4-258ENST00000627320 ATP5J2-PTCD1G3V325 749 aa11.3□□□□□ -0.6
TCF4-258ENST00000627320 RSBN1LQ6PCB5 846 aaPredicted RBP11.3□□□□□ -0.6
TCF4-258ENST00000627320 COPS6Q7L5N1 327 aa11.3□□□□□ -0.6
TCF4-258ENST00000627320 SLC17A8Q8NDX2 589 aa11.3□□□□□ -0.6
TCF4-258ENST00000627320 JARID2Q92833 1246 aaPredicted RBP11.3□□□□□ -0.6
TCF4-258ENST00000627320 CCDC85AQ96PX6 553 aaPredicted RBP11.3□□□□□ -0.6
TCF4-258ENST00000627320 GMLQ99445 158 aa11.3□□□□□ -0.6
TCF4-258ENST00000627320 PCDHAC2Q9Y5I4 1007 aa11.3□□□□□ -0.6
TCF4-258ENST00000627320 AOX1Q06278 1338 aa11.3□□□□□ -0.6
TCF4-258ENST00000627320 SH3TC1Q8TE82 1336 aa11.3□□□□□ -0.6
TCF4-258ENST00000627320 SOX1O00570 391 aaPredicted RBP11.29□□□□□ -0.6
TCF4-258ENST00000627320 ABCB7O75027 752 aa11.29□□□□□ -0.6
TCF4-258ENST00000627320 UFL1O94874 794 aa11.29□□□□□ -0.6
TCF4-258ENST00000627320 DSG3P32926 999 aa11.29□□□□□ -0.6
TCF4-258ENST00000627320 GJA5P36382 358 aa11.29□□□□□ -0.6
TCF4-258ENST00000627320 SPRYD7Q5W111 196 aa11.29□□□□□ -0.6
TCF4-258ENST00000627320 FKBP1BP68106 108 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms