RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 PPME1Q9Y570 386 aa8.79□□□□□ -1
TCF4-250ENST00000625849 OPLAHO14841 1288 aa8.78□□□□□ -1
TCF4-250ENST00000625849 MMP20O60882 483 aa8.78□□□□□ -1
TCF4-250ENST00000625849 WNT11O96014 354 aa8.78□□□□□ -1
TCF4-250ENST00000625849 RNF43Q68DV7 783 aa8.78□□□□□ -1
TCF4-250ENST00000625849 ACAD11Q709F0 780 aa8.78□□□□□ -1
TCF4-250ENST00000625849 DBNDD2Q9BQY9 259 aa8.78□□□□□ -1
TCF4-250ENST00000625849 TRIM33Q9UPN9 1127 aa8.78□□□□□ -1
TCF4-250ENST00000625849 WISP1O95388 367 aa8.77□□□□□ -1.01
TCF4-250ENST00000625849 TRIM42Q8IWZ5 723 aa8.77□□□□□ -1.01
TCF4-250ENST00000625849 CMTR1Q8N1G2 835 aaKnown RBP8.77□□□□□ -1.01
TCF4-250ENST00000625849 GALNT11Q8NCW6 608 aa8.77□□□□□ -1.01
TCF4-250ENST00000625849 MYO19Q96H55 970 aa8.77□□□□□ -1.01
TCF4-250ENST00000625849 PRR19A6NJB7 356 aa8.76□□□□□ -1.01
TCF4-250ENST00000625849 DPYDQ12882 1025 aa8.76□□□□□ -1.01
TCF4-250ENST00000625849 RGL4Q8IZJ4 473 aa8.76□□□□□ -1.01
TCF4-250ENST00000625849 VTI1AQ96AJ9 217 aa8.76□□□□□ -1.01
TCF4-250ENST00000625849 HMX2A2RU54 273 aa8.75□□□□□ -1.01
TCF4-250ENST00000625849 FOXO3O43524 673 aa8.75□□□□□ -1.01
TCF4-250ENST00000625849 CD68P34810 354 aaPredicted RBP8.75□□□□□ -1.01
TCF4-250ENST00000625849 FAM46AQ96IP4 442 aaKnown RBP8.75□□□□□ -1.01
TCF4-250ENST00000625849 ADGRE2Q9UHX3 823 aa8.75□□□□□ -1.01
TCF4-250ENST00000625849 LINC01387J3KSC0 135 aa8.74□□□□□ -1.01
TCF4-250ENST00000625849 PTK7Q13308 1070 aa8.74□□□□□ -1.01
TCF4-250ENST00000625849 CRTC2Q53ET0 693 aaPredicted RBP8.74□□□□□ -1.01
TCF4-250ENST00000625849 TFIP11Q9UBB9 837 aaKnown RBP8.74□□□□□ -1.01
TCF4-250ENST00000625849 MAFBQ9Y5Q3 323 aaPredicted RBP8.74□□□□□ -1.01
TCF4-250ENST00000625849 MYRFLQ96LU7 910 aa8.73□□□□□ -1.01
TCF4-250ENST00000625849 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
TCF4-250ENST00000625849 TREML1Q86YW5 311 aa8.72□□□□□ -1.01
TCF4-250ENST00000625849 UBTFP17480 764 aaKnown RBP8.71□□□□□ -1.02
TCF4-250ENST00000625849 TXNDC11Q6PKC3 985 aa8.71□□□□□ -1.02
TCF4-250ENST00000625849 CLEC10AQ8IUN9 316 aa8.71□□□□□ -1.02
TCF4-250ENST00000625849 ANKMY2Q8IV38 441 aa8.71□□□□□ -1.02
TCF4-250ENST00000625849 SHKBP1Q8TBC3 707 aa8.71□□□□□ -1.02
TCF4-250ENST00000625849 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.71□□□□□ -1.02
TCF4-250ENST00000625849 KCNK4Q9NYG8 393 aa8.71□□□□□ -1.02
TCF4-250ENST00000625849 LRFN2Q9ULH4 789 aa8.71□□□□□ -1.02
TCF4-250ENST00000625849 WEE1P30291 646 aa8.7□□□□□ -1.02
TCF4-250ENST00000625849 KIAA1211Q6ZU35 1233 aa8.7□□□□□ -1.02
TCF4-250ENST00000625849 FAM20CQ8IXL6 584 aa8.7□□□□□ -1.02
TCF4-250ENST00000625849 FAM83CQ9BQN1 747 aa8.7□□□□□ -1.02
TCF4-250ENST00000625849 USP17L15C9J2P7 530 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 USP17L10C9JJH3 530 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 USP17L13C9JLJ4 530 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 USP17L12C9JPN9 530 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 USP17L11C9JVI0 530 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 USP17L21D6R901 530 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 USP17L18D6R9N7 530 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 USP17L22D6RA61 530 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 USP17L17D6RBQ6 530 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 USP17L19D6RCP7 530 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 USP17L20D6RJB6 530 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 CDC27P30260 824 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 JAG1P78504 1218 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 USP17L24Q0WX57 530 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 DUOXA2Q1HG44 320 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 NLRP13Q86W25 1043 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 LACRTQ9GZZ8 138 aa8.69□□□□□ -1.02
TCF4-250ENST00000625849 FAM196BA6NMK8 535 aa8.68□□□□□ -1.02
TCF4-250ENST00000625849 CEP135Q66GS9 1140 aa8.68□□□□□ -1.02
TCF4-250ENST00000625849 KLHL23Q8NBE8 558 aa8.68□□□□□ -1.02
TCF4-250ENST00000625849 CARD10Q9BWT7 1032 aa8.68□□□□□ -1.02
TCF4-250ENST00000625849 TM4SF5O14894 197 aa8.67□□□□□ -1.02
TCF4-250ENST00000625849 SART1O43290 800 aaKnown RBP8.67□□□□□ -1.02
TCF4-250ENST00000625849 SMNDC1O75940 238 aaKnown RBP eCLIP8.67□□□□□ -1.02
TCF4-250ENST00000625849 ATP11AP98196 1134 aa8.67□□□□□ -1.02
TCF4-250ENST00000625849 FAM117BQ6P1L5 589 aa8.67□□□□□ -1.02
TCF4-250ENST00000625849 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.67□□□□□ -1.02
TCF4-250ENST00000625849 SPACA7Q96KW9 195 aa8.67□□□□□ -1.02
TCF4-250ENST00000625849 KCNF1Q9H3M0 494 aa8.67□□□□□ -1.02
TCF4-250ENST00000625849 FSCN2O14926 492 aa8.66□□□□□ -1.02
TCF4-250ENST00000625849 BMP3P12645 472 aa8.66□□□□□ -1.02
TCF4-250ENST00000625849 CDC25BP30305 580 aa8.66□□□□□ -1.02
TCF4-250ENST00000625849 HYAL2Q12891 473 aa8.66□□□□□ -1.02
TCF4-250ENST00000625849 KANK4Q5T7N3 995 aaPredicted RBP8.66□□□□□ -1.02
TCF4-250ENST00000625849 BEND4Q6ZU67 534 aa8.66□□□□□ -1.02
TCF4-250ENST00000625849 ABI1Q8IZP0 508 aa8.66□□□□□ -1.02
TCF4-250ENST00000625849 OR13H1Q8NG92 308 aa8.66□□□□□ -1.02
TCF4-250ENST00000625849 KRTAP4-9Q9BYQ8 210 aa8.66□□□□□ -1.02
TCF4-250ENST00000625849 WDR64B1ANS9 1081 aa8.65□□□□□ -1.02
TCF4-250ENST00000625849 TRIP4Q15650 581 aaPredicted RBP8.65□□□□□ -1.02
TCF4-250ENST00000625849 OGFOD2Q6N063 350 aa8.65□□□□□ -1.02
TCF4-250ENST00000625849 UBASH3BQ8TF42 649 aa8.65□□□□□ -1.02
TCF4-250ENST00000625849 FOXD4L4Q8WXT5 416 aaPredicted RBP8.65□□□□□ -1.02
TCF4-250ENST00000625849 GLMNQ92990 594 aa8.65□□□□□ -1.02
TCF4-250ENST00000625849 FLIIQ13045 1269 aa8.64□□□□□ -1.03
TCF4-250ENST00000625849 COL13A1Q5TAT6 717 aaPredicted RBP8.64□□□□□ -1.03
TCF4-250ENST00000625849 ANKRD34AQ69YU3 496 aa8.64□□□□□ -1.03
TCF4-250ENST00000625849 PIM2Q9P1W9 311 aa8.64□□□□□ -1.03
TCF4-250ENST00000625849 ANGEL1Q9UNK9 670 aaKnown RBP8.64□□□□□ -1.03
TCF4-250ENST00000625849 HIF3AQ9Y2N7 669 aa8.64□□□□□ -1.03
TCF4-250ENST00000625849 DDX3YO15523 660 aaKnown RBP8.63□□□□□ -1.03
TCF4-250ENST00000625849 HOXA10P31260 410 aaPredicted RBP8.63□□□□□ -1.03
TCF4-250ENST00000625849 COX20Q5RI15 118 aa8.63□□□□□ -1.03
TCF4-250ENST00000625849 ARXQ96QS3 562 aa8.63□□□□□ -1.03
TCF4-250ENST00000625849 SEC31BQ9NQW1 1179 aa8.63□□□□□ -1.03
TCF4-250ENST00000625849 ADAM11O75078 769 aa8.62□□□□□ -1.03
TCF4-250ENST00000625849 PREPP48147 710 aa8.62□□□□□ -1.03
TCF4-250ENST00000625849 GIMAP7Q8NHV1 300 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms