RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 RETREG2Q8NC44 543 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 PARD3BQ8TEW8 1205 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 KCNH4Q9UQ05 1017 aa7.15□□□□□ -1.27
CDKL5-205ENST00000623535 ATF7P17544 494 aaPredicted RBP7.15□□□□□ -1.27
CDKL5-205ENST00000623535 RBM25P49756 843 aaKnown RBP7.15□□□□□ -1.27
CDKL5-205ENST00000623535 SULT6B1Q6IMI4 303 aa7.15□□□□□ -1.27
CDKL5-205ENST00000623535 GLT8D2Q9H1C3 349 aa7.15□□□□□ -1.27
CDKL5-205ENST00000623535 ANKFY1Q9P2R3 1169 aa7.15□□□□□ -1.27
CDKL5-205ENST00000623535 BLOC1S2Q6QNY1 142 aa7.15□□□□□ -1.27
CDKL5-205ENST00000623535 ENGASEQ8NFI3 743 aa7.15□□□□□ -1.27
CDKL5-205ENST00000623535 EDEM3Q9BZQ6 932 aa7.15□□□□□ -1.27
CDKL5-205ENST00000623535 CAVIN1Q6NZI2 390 aaKnown RBP7.15□□□□□ -1.27
CDKL5-205ENST00000623535 CCDC113Q9H0I3 377 aa7.15□□□□□ -1.27
CDKL5-205ENST00000623535 CCDC6Q16204 474 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 ZNF771Q7L3S4 317 aaPredicted RBP7.14□□□□□ -1.27
CDKL5-205ENST00000623535 CWC25Q9NXE8 425 aaPredicted RBP7.14□□□□□ -1.27
CDKL5-205ENST00000623535 STX8Q9UNK0 236 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 GOLIM4O00461 696 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 ALDH3A1P30838 453 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 EIF2B5Q13144 721 aaKnown RBP7.14□□□□□ -1.27
CDKL5-205ENST00000623535 MAP9Q49MG5 647 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 USP21Q9UK80 565 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 F8W031 263 aaPredicted RBP7.14□□□□□ -1.27
CDKL5-205ENST00000623535 ZNF213O14771 459 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 PRKCQQ04759 706 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 ACBD5Q5T8D3 534 aaPredicted RBP7.14□□□□□ -1.27
CDKL5-205ENST00000623535 CCDC144CPQ8IYA2 1237 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 POLR2BP30876 1174 aaKnown RBP7.14□□□□□ -1.27
CDKL5-205ENST00000623535 JAKMIP2Q96AA8 810 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 GGNBP2Q9H3C7 697 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 GOLGA8AA7E2F4 631 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 GOLGA8BA8MQT2 603 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 DYNC1I1O14576 645 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 ZNF526Q8TF50 670 aaPredicted RBP7.14□□□□□ -1.27
CDKL5-205ENST00000623535 STIM2Q9P246 746 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 PRG4Q92954 1404 aaPredicted RBP7.14□□□□□ -1.27
CDKL5-205ENST00000623535 FBXW4P57775 412 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 SSRP1Q08945 709 aaKnown RBP7.14□□□□□ -1.27
CDKL5-205ENST00000623535 ARHGAP29Q52LW3 1261 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 MSL1Q68DK7 614 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 TTC6Q86TZ1 520 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 SPDYE16A6NNV3 312 aaPredicted RBP7.14□□□□□ -1.27
CDKL5-205ENST00000623535 SLC4A2P04920 1241 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 TRPC3Q13507 836 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 SPDYE2Q495Y8 402 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 C2orf69Q8N8R5 385 aa7.14□□□□□ -1.27
CDKL5-205ENST00000623535 ELF1P32519 619 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 BIRC3Q13489 604 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 RDH13Q8NBN7 331 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 DPYSL4O14531 572 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 PROCA1Q8NCQ7 364 aaPredicted RBP7.13□□□□□ -1.27
CDKL5-205ENST00000623535 RAD54L2Q9Y4B4 1467 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 FMNL1O95466 1100 aaPredicted RBP7.13□□□□□ -1.27
CDKL5-205ENST00000623535 WDR44Q5JSH3 913 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 MFSD6Q6ZSS7 791 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 SERTAD1Q9UHV2 236 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 CCDC61Q9Y6R9 512 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 GRIN2BQ13224 1484 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 PICALMQ13492 652 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 SND1Q7KZF4 910 aaKnown RBP eCLIP7.13□□□□□ -1.27
CDKL5-205ENST00000623535 HS2ST1Q7LGA3 356 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 ZSCAN31Q96LW9 406 aaPredicted RBP7.13□□□□□ -1.27
CDKL5-205ENST00000623535 CCNL1Q9UK58 526 aaPredicted RBP7.13□□□□□ -1.27
CDKL5-205ENST00000623535 MBD3O95983 291 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 TWISTNBQ3B726 338 aaPredicted RBP7.13□□□□□ -1.27
CDKL5-205ENST00000623535 RASAL2Q9UJF2 1139 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 IDEP14735 1019 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 TMOD1P28289 359 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 PNMA3Q9UL41 463 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 AFG3L2Q9Y4W6 797 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 BMP15O95972 392 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 ANO6Q4KMQ2 910 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 VAT1LQ9HCJ6 419 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 EXOC7Q9UPT5 735 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 GINS2Q9Y248 185 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 ERCC6LQ2NKX8 1250 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 DNAAF4Q8WXU2 420 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 CCPG1Q9ULG6 757 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 FNBP1Q96RU3 617 aa7.13□□□□□ -1.27
CDKL5-205ENST00000623535 TTC30AQ86WT1 665 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 TMTC2Q8N394 836 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 CCDC110Q8TBZ0 833 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 NOL3O60936 208 aaKnown RBP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 TDRD12Q587J7 1177 aaKnown RBP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 CEP128Q6ZU80 1094 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 RPS6KC1Q96S38 1066 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 FOXO3O43524 673 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 YWHAEP62258 255 aaKnown RBP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 KRT83P78385 493 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 NBPF11Q86T75 865 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 YAF2Q8IY57 180 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 FAM184BQ9ULE4 1060 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 PAFAH1B1P43034 410 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 NOP9Q86U38 636 aaKnown RBP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 MRC2Q9UBG0 1479 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 UBA7P41226 1012 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 SRPK1Q96SB4 655 aaKnown RBP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 GNPATO15228 680 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 NEK4P51957 841 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms