RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 CANXP27824 592 aaKnown RBP9.18□□□□□ -0.94
CDKL5-204ENST00000623364 HSP90AB2PQ58FF8 381 aa9.18□□□□□ -0.94
CDKL5-204ENST00000623364 USP38Q8NB14 1042 aa9.18□□□□□ -0.94
CDKL5-204ENST00000623364 U2AF1L4Q8WU68 220 aaKnown RBP9.18□□□□□ -0.94
CDKL5-204ENST00000623364 THEGQ9P2T0 379 aa9.18□□□□□ -0.94
CDKL5-204ENST00000623364 COL2A1P02458 1487 aaPredicted RBP9.17□□□□□ -0.94
CDKL5-204ENST00000623364 KIF24Q5T7B8 1368 aa9.17□□□□□ -0.94
CDKL5-204ENST00000623364 FAM205AQ6ZU69 1335 aa9.17□□□□□ -0.94
CDKL5-204ENST00000623364 IGF2BP3O00425 579 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDKL5-204ENST00000623364 CAPN2P17655 700 aa9.17□□□□□ -0.94
CDKL5-204ENST00000623364 TMX4Q9H1E5 349 aaPredicted RBP9.17□□□□□ -0.94
CDKL5-204ENST00000623364 PRMT2P55345 433 aa9.16□□□□□ -0.94
CDKL5-204ENST00000623364 KIF4BQ2VIQ3 1234 aa9.16□□□□□ -0.94
CDKL5-204ENST00000623364 NUTM1Q86Y26 1132 aa9.16□□□□□ -0.94
CDKL5-204ENST00000623364 SUPT20HQ8NEM7 779 aa9.16□□□□□ -0.94
CDKL5-204ENST00000623364 SMIM22K7EJ46 135 aa9.15□□□□□ -0.94
CDKL5-204ENST00000623364 SGPL1O95470 568 aa9.15□□□□□ -0.94
CDKL5-204ENST00000623364 GNRH1P01148 92 aa9.15□□□□□ -0.94
CDKL5-204ENST00000623364 NF2P35240 595 aa9.15□□□□□ -0.94
CDKL5-204ENST00000623364 EIF5P55010 431 aaKnown RBP9.15□□□□□ -0.94
CDKL5-204ENST00000623364 KIF22Q14807 665 aa9.15□□□□□ -0.94
CDKL5-204ENST00000623364 TPTE2Q6XPS3 522 aa9.15□□□□□ -0.94
CDKL5-204ENST00000623364 NFATC2IPQ8NCF5 419 aa9.15□□□□□ -0.94
CDKL5-204ENST00000623364 TMC1Q8TDI8 760 aa9.15□□□□□ -0.94
CDKL5-204ENST00000623364 NECAB3Q96P71 396 aaPredicted RBP9.15□□□□□ -0.94
CDKL5-204ENST00000623364 TERF2IPQ9NYB0 399 aa9.15□□□□□ -0.94
CDKL5-204ENST00000623364 TBC1D2BQ9UPU7 963 aa9.15□□□□□ -0.94
CDKL5-204ENST00000623364 SCN7AQ01118 1682 aa9.15□□□□□ -0.94
CDKL5-204ENST00000623364 ALPK3Q96L96 1907 aa9.15□□□□□ -0.95
CDKL5-204ENST00000623364 TFRCP02786 760 aaKnown RBP9.14□□□□□ -0.95
CDKL5-204ENST00000623364 UBXN2AP68543 259 aa9.14□□□□□ -0.95
CDKL5-204ENST00000623364 PTPN12Q05209 780 aaKnown RBP9.14□□□□□ -0.95
CDKL5-204ENST00000623364 ANGEL2Q5VTE6 544 aaKnown RBP9.14□□□□□ -0.95
CDKL5-204ENST00000623364 NECAB2Q7Z6G3 386 aa9.14□□□□□ -0.95
CDKL5-204ENST00000623364 NPM2Q86SE8 214 aaKnown RBP9.14□□□□□ -0.95
CDKL5-204ENST00000623364 BIN2Q9UBW5 565 aaPredicted RBP9.14□□□□□ -0.95
CDKL5-204ENST00000623364 ZNF330Q9Y3S2 320 aaPredicted RBP9.14□□□□□ -0.95
CDKL5-204ENST00000623364 NCAPD2Q15021 1401 aa9.14□□□□□ -0.95
CDKL5-204ENST00000623364 FLT4P35916 1363 aa9.13□□□□□ -0.95
CDKL5-204ENST00000623364 FAM86C2PA6NEL3 165 aa9.13□□□□□ -0.95
CDKL5-204ENST00000623364 RPS12P25398 132 aaKnown RBP9.13□□□□□ -0.95
CDKL5-204ENST00000623364 ITGB8P26012 769 aa9.13□□□□□ -0.95
CDKL5-204ENST00000623364 GRK4P32298 578 aa9.13□□□□□ -0.95
CDKL5-204ENST00000623364 ERMP1Q7Z2K6 904 aa9.13□□□□□ -0.95
CDKL5-204ENST00000623364 ARMC9Q7Z3E5 817 aa9.13□□□□□ -0.95
CDKL5-204ENST00000623364 PAWRQ96IZ0 340 aaKnown RBP9.13□□□□□ -0.95
CDKL5-204ENST00000623364 TTYH1Q9H313 450 aaPredicted RBP9.13□□□□□ -0.95
CDKL5-204ENST00000623364 ASTN2O75129 1339 aaPredicted RBP9.12□□□□□ -0.95
CDKL5-204ENST00000623364 ST20-MTHFSA0A0A6YYL1 179 aa9.12□□□□□ -0.95
CDKL5-204ENST00000623364 TCERG1O14776 1098 aaKnown RBP9.12□□□□□ -0.95
CDKL5-204ENST00000623364 ZBTB48P10074 688 aaPredicted RBP9.12□□□□□ -0.95
CDKL5-204ENST00000623364 MTHFSP49914 203 aa9.12□□□□□ -0.95
CDKL5-204ENST00000623364 KCNH6Q9H252 994 aa9.12□□□□□ -0.95
CDKL5-204ENST00000623364 C11orf16Q9NQ32 467 aa9.12□□□□□ -0.95
CDKL5-204ENST00000623364 STARD3NLO95772 234 aa9.11□□□□□ -0.95
CDKL5-204ENST00000623364 KIAA2012Q0VF49 1180 aa9.11□□□□□ -0.95
CDKL5-204ENST00000623364 COL9A2Q14055 689 aaPredicted RBP9.11□□□□□ -0.95
CDKL5-204ENST00000623364 RAET1EQ8TD07 263 aa9.11□□□□□ -0.95
CDKL5-204ENST00000623364 PPM1EQ8WY54 764 aa9.11□□□□□ -0.95
CDKL5-204ENST00000623364 RPGRQ92834 1020 aaKnown RBP9.11□□□□□ -0.95
CDKL5-204ENST00000623364 SLC10A4Q96EP9 437 aa9.11□□□□□ -0.95
CDKL5-204ENST00000623364 TRIM47Q96LD4 638 aa9.11□□□□□ -0.95
CDKL5-204ENST00000623364 SSC5DA1L4H1 1573 aa9.11□□□□□ -0.95
CDKL5-204ENST00000623364 KMT2BQ9UMN6 2715 aaPredicted RBP9.11□□□□□ -0.95
CDKL5-204ENST00000623364 CFAP54Q96N23 3096 aa9.1□□□□□ -0.95
CDKL5-204ENST00000623364 PSMD14O00487 310 aa9.1□□□□□ -0.95
CDKL5-204ENST00000623364 GTF2E1P29083 439 aaPredicted RBP9.1□□□□□ -0.95
CDKL5-204ENST00000623364 MDM2Q00987 491 aaPredicted RBP9.1□□□□□ -0.95
CDKL5-204ENST00000623364 SCARF1Q14162 830 aa9.1□□□□□ -0.95
CDKL5-204ENST00000623364 ZFYVE28Q9HCC9 887 aa9.1□□□□□ -0.95
CDKL5-204ENST00000623364 RIPOR2Q9Y4F9 1068 aa9.1□□□□□ -0.95
CDKL5-204ENST00000623364 RIC1Q4ADV7 1423 aa9.1□□□□□ -0.95
CDKL5-204ENST00000623364 TCF20Q9UGU0 1960 aaKnown RBP9.1□□□□□ -0.95
CDKL5-204ENST00000623364 ANKRD11Q6UB99 2663 aaPredicted RBP9.09□□□□□ -0.95
CDKL5-204ENST00000623364 YDJCA8MPS7 323 aa9.09□□□□□ -0.95
CDKL5-204ENST00000623364 PRR33A8MZF0 331 aa9.09□□□□□ -0.95
CDKL5-204ENST00000623364 CAMTA2O94983 1202 aa9.09□□□□□ -0.95
CDKL5-204ENST00000623364 CRY2Q49AN0 593 aa9.09□□□□□ -0.95
CDKL5-204ENST00000623364 PRAMEF18Q5VWM3 479 aa9.09□□□□□ -0.95
CDKL5-204ENST00000623364 FBXL18Q96ME1 805 aa9.09□□□□□ -0.95
CDKL5-204ENST00000623364 RTFDC1Q9BY42 306 aaPredicted RBP9.09□□□□□ -0.95
CDKL5-204ENST00000623364 SLC12A5Q9H2X9 1139 aa9.09□□□□□ -0.95
CDKL5-204ENST00000623364 CDH23Q9H251 3354 aa9.09□□□□□ -0.95
CDKL5-204ENST00000623364 HOXD10P28358 340 aa9.08□□□□□ -0.96
CDKL5-204ENST00000623364 LACTBP83111 547 aaPredicted RBP9.08□□□□□ -0.96
CDKL5-204ENST00000623364 LDLRAD1Q5T700 205 aa9.08□□□□□ -0.96
CDKL5-204ENST00000623364 ZNF530Q6P9A1 599 aaPredicted RBP9.08□□□□□ -0.96
CDKL5-204ENST00000623364 VSIG10Q8N0Z9 540 aa9.08□□□□□ -0.96
CDKL5-204ENST00000623364 ARHGAP39Q9C0H5 1083 aa9.08□□□□□ -0.96
CDKL5-204ENST00000623364 UNC93B1Q9H1C4 597 aa9.08□□□□□ -0.96
CDKL5-204ENST00000623364 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.08□□□□□ -0.96
CDKL5-204ENST00000623364 TAF1P21675 1872 aa9.08□□□□□ -0.96
CDKL5-204ENST00000623364 TPRP12270 2363 aaKnown RBP9.07□□□□□ -0.96
CDKL5-204ENST00000623364 WDHD1O75717 1129 aaPredicted RBP9.07□□□□□ -0.96
CDKL5-204ENST00000623364 BMP1P13497 986 aa9.07□□□□□ -0.96
CDKL5-204ENST00000623364 HOXA10P31260 410 aaPredicted RBP9.07□□□□□ -0.96
CDKL5-204ENST00000623364 SMAD3P84022 425 aaKnown RBP9.07□□□□□ -0.96
CDKL5-204ENST00000623364 PRKG1Q13976 671 aa9.07□□□□□ -0.96
CDKL5-204ENST00000623364 TAF1CQ15572 869 aaPredicted RBP9.07□□□□□ -0.96
CDKL5-204ENST00000623364 PLEKHO1Q53GL0 409 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms