RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 SLFN5Q08AF3 891 aa7.6□□□□□ -1.19
LINC00963-215ENST00000622972 AIMP1Q12904 312 aaKnown RBP7.6□□□□□ -1.19
LINC00963-215ENST00000622972 IFFO2Q5TF58 517 aa7.6□□□□□ -1.19
LINC00963-215ENST00000622972 PPP1R42Q7Z4L9 355 aa7.6□□□□□ -1.19
LINC00963-215ENST00000622972 RTKN2Q8IZC4 609 aa7.6□□□□□ -1.19
LINC00963-215ENST00000622972 KLRG1Q96E93 195 aa7.6□□□□□ -1.19
LINC00963-215ENST00000622972 ZNF277Q9NRM2 450 aaPredicted RBP7.6□□□□□ -1.19
LINC00963-215ENST00000622972 COL4A1P02462 1669 aa7.6□□□□□ -1.19
LINC00963-215ENST00000622972 ZBED9Q6R2W3 1325 aa7.59□□□□□ -1.19
LINC00963-215ENST00000622972 IQCA1LA6NCM1 817 aa7.59□□□□□ -1.19
LINC00963-215ENST00000622972 ST18O60284 1047 aa7.59□□□□□ -1.19
LINC00963-215ENST00000622972 EAPPQ56P03 285 aaPredicted RBP7.59□□□□□ -1.19
LINC00963-215ENST00000622972 DUSP27Q5VZP5 1158 aa7.59□□□□□ -1.19
LINC00963-215ENST00000622972 OLFM4Q6UX06 510 aa7.59□□□□□ -1.19
LINC00963-215ENST00000622972 WDR63Q8IWG1 891 aa7.59□□□□□ -1.19
LINC00963-215ENST00000622972 SYNE4Q8N205 404 aa7.59□□□□□ -1.19
LINC00963-215ENST00000622972 DNAJC5GQ8N7S2 189 aa7.59□□□□□ -1.19
LINC00963-215ENST00000622972 JDP2Q8WYK2 163 aa7.59□□□□□ -1.19
LINC00963-215ENST00000622972 RBM17Q96I25 401 aaKnown RBP7.59□□□□□ -1.19
LINC00963-215ENST00000622972 ERBB4Q15303 1308 aa7.58□□□□□ -1.2
LINC00963-215ENST00000622972 TAF1P21675 1872 aa7.58□□□□□ -1.2
LINC00963-215ENST00000622972 ELL2O00472 640 aaPredicted RBP7.58□□□□□ -1.2
LINC00963-215ENST00000622972 IARSP41252 1262 aaKnown RBP7.58□□□□□ -1.2
LINC00963-215ENST00000622972 GNAI1P63096 354 aa7.58□□□□□ -1.2
LINC00963-215ENST00000622972 EXOSC9Q06265 439 aaKnown RBP7.58□□□□□ -1.2
LINC00963-215ENST00000622972 PARP10Q53GL7 1025 aa7.58□□□□□ -1.2
LINC00963-215ENST00000622972 SUSD4Q5VX71 490 aa7.58□□□□□ -1.2
LINC00963-215ENST00000622972 GIGYF2Q6Y7W6 1299 aaKnown RBP7.58□□□□□ -1.2
LINC00963-215ENST00000622972 NLRP3Q96P20 1036 aa7.58□□□□□ -1.2
LINC00963-215ENST00000622972 BABAM1Q9NWV8 329 aa7.58□□□□□ -1.2
LINC00963-215ENST00000622972 LHX6Q9UPM6 363 aa7.58□□□□□ -1.2
LINC00963-215ENST00000622972 GJA3Q9Y6H8 435 aa7.58□□□□□ -1.2
LINC00963-215ENST00000622972 ABCC12Q96J65 1359 aa7.58□□□□□ -1.2
LINC00963-215ENST00000622972 UBN2Q6ZU65 1347 aa7.57□□□□□ -1.2
LINC00963-215ENST00000622972 KLRG2A4D1S0 409 aaPredicted RBP7.57□□□□□ -1.2
LINC00963-215ENST00000622972 POTECB2RU33 542 aa7.57□□□□□ -1.2
LINC00963-215ENST00000622972 PPEF1O14829 653 aaPredicted RBP7.57□□□□□ -1.2
LINC00963-215ENST00000622972 EIF6P56537 245 aaKnown RBP7.57□□□□□ -1.2
LINC00963-215ENST00000622972 HSP90AB3PQ58FF7 597 aa7.57□□□□□ -1.2
LINC00963-215ENST00000622972 CC2D2BQ6DHV5 1058 aa7.57□□□□□ -1.2
LINC00963-215ENST00000622972 COPS6Q7L5N1 327 aa7.57□□□□□ -1.2
LINC00963-215ENST00000622972 G2E3Q7L622 706 aa7.57□□□□□ -1.2
LINC00963-215ENST00000622972 LARGE2Q8N3Y3 721 aa7.57□□□□□ -1.2
LINC00963-215ENST00000622972 ZNF454Q8N9F8 522 aa7.57□□□□□ -1.2
LINC00963-215ENST00000622972 C7orf43Q8WVR3 580 aa7.57□□□□□ -1.2
LINC00963-215ENST00000622972 EPAS1Q99814 870 aa7.57□□□□□ -1.2
LINC00963-215ENST00000622972 UTP14AQ9BVJ6 771 aaKnown RBP7.57□□□□□ -1.2
LINC00963-215ENST00000622972 ZNF541Q9H0D2 1346 aa7.56□□□□□ -1.2
LINC00963-215ENST00000622972 VAMP4O75379 141 aa7.56□□□□□ -1.2
LINC00963-215ENST00000622972 NTSR2O95665 410 aa7.56□□□□□ -1.2
LINC00963-215ENST00000622972 LMOD1P29536 600 aaPredicted RBP7.56□□□□□ -1.2
LINC00963-215ENST00000622972 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.56□□□□□ -1.23e-6■■■□□ 16.7
LINC00963-215ENST00000622972 LDHDQ86WU2 507 aa7.56□□□□□ -1.2
LINC00963-215ENST00000622972 ZNF34Q8IZ26 560 aa7.56□□□□□ -1.2
LINC00963-215ENST00000622972 XAGE3Q8WTP9 111 aa7.56□□□□□ -1.2
LINC00963-215ENST00000622972 CHPF2Q9P2E5 772 aa7.56□□□□□ -1.2
LINC00963-215ENST00000622972 HACL1Q9UJ83 578 aa7.56□□□□□ -1.2
LINC00963-215ENST00000622972 A0A1B0GUL6 1792 aa7.56□□□□□ -1.2
LINC00963-215ENST00000622972 RNF123Q5XPI4 1314 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 SPEF2Q9C093 1822 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 MYH3P11055 1940 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 PPIP5K2O43314 1243 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 EPHX2P34913 555 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 EMP3P54852 163 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 TWISTNBQ3B726 338 aaPredicted RBP7.55□□□□□ -1.2
LINC00963-215ENST00000622972 CRY2Q49AN0 593 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 PPP4R3BQ5MIZ7 849 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 HDGFL1Q5TGJ6 251 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 TYW1BQ6NUM6 668 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 DDX46Q7L014 1031 aaKnown RBP7.55□□□□□ -1.2
LINC00963-215ENST00000622972 NIM1KQ8IY84 436 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 ZNF428Q96B54 188 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 CRAMP1Q96RY5 1269 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 PSMD1Q99460 953 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 TAF1DQ9H5J8 278 aaPredicted RBP7.55□□□□□ -1.2
LINC00963-215ENST00000622972 PHAXQ9H814 394 aaKnown RBP7.55□□□□□ -1.2
LINC00963-215ENST00000622972 DDX21Q9NR30 783 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC00963-215ENST00000622972 MKRN1Q9UHC7 482 aaKnown RBP7.55□□□□□ -1.2
LINC00963-215ENST00000622972 TRMT112Q9UI30 125 aaKnown RBP7.55□□□□□ -1.2
LINC00963-215ENST00000622972 PCDHGA10Q9Y5H3 936 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 IBTKQ9P2D0 1353 aaPredicted RBP7.55□□□□□ -1.2
LINC00963-215ENST00000622972 SCN4AP35499 1836 aa7.55□□□□□ -1.2
LINC00963-215ENST00000622972 E9PSI1 815 aa7.54□□□□□ -1.2
LINC00963-215ENST00000622972 HCLS1P14317 486 aaPredicted RBP7.54□□□□□ -1.2
LINC00963-215ENST00000622972 HOXA10P31260 410 aaPredicted RBP7.54□□□□□ -1.2
LINC00963-215ENST00000622972 FOSBP53539 338 aa7.54□□□□□ -1.2
LINC00963-215ENST00000622972 TCIRG1Q13488 830 aa7.54□□□□□ -1.2
LINC00963-215ENST00000622972 GRIPAP1Q4V328 841 aa7.54□□□□□ -1.2
LINC00963-215ENST00000622972 PNMA8AQ86V59 439 aaPredicted RBP7.54□□□□□ -1.2
LINC00963-215ENST00000622972 GPC2Q8N158 579 aa7.54□□□□□ -1.2
LINC00963-215ENST00000622972 JMYQ8N9B5 988 aa7.54□□□□□ -1.2
LINC00963-215ENST00000622972 SUPT20HQ8NEM7 779 aa7.54□□□□□ -1.2
LINC00963-215ENST00000622972 FBXW7Q969H0 707 aa7.54□□□□□ -1.2
LINC00963-215ENST00000622972 YTHDC1Q96MU7 727 aaKnown RBP7.54□□□□□ -1.2
LINC00963-215ENST00000622972 TNNQ9UQP3 1299 aa7.54□□□□□ -1.2
LINC00963-215ENST00000622972 SH3TC1Q8TE82 1336 aa7.53□□□□□ -1.2
LINC00963-215ENST00000622972 FZD9O00144 591 aa7.53□□□□□ -1.2
LINC00963-215ENST00000622972 HOXB7P09629 217 aa7.53□□□□□ -1.2
LINC00963-215ENST00000622972 HSPA1AP0DMV8 641 aaKnown RBP7.53□□□□□ -1.2
LINC00963-215ENST00000622972 HSPA1BP0DMV9 641 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 289.8 ms