RNA–Protein interactions for RNA: ENST00000619193.4

RDM1-223, Transcript of RAD52 motif containing 1, human

TSL 1 (best)

Gene RDM1, Length 686 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDM1-223	ENST00000619193	DNM1	Q05193	864 aa	Known RBP	7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	NMI	Q13287	307 aa	Predicted RBP	7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	TOB2	Q14106	344 aa	Predicted RBP	7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	CWF19L2	Q2TBE0	894 aa	Known RBP	7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	TSGA10IP	Q3SY00	556 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	HSP90AB4P	Q58FF6	505 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	USPL1	Q5W0Q7	1092 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	CREB3L3	Q68CJ9	461 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	ZNF530	Q6P9A1	599 aa	Predicted RBP	7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	SASS6	Q6UVJ0	657 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	TTC6	Q86TZ1	520 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	ZNF710	Q8N1W2	664 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	FAM184A	Q8NB25	1140 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	PIBF1	Q8WXW3	757 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	ZSCAN31	Q96LW9	406 aa	Predicted RBP	7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	FAM227B	Q96M60	508 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	BCL11B	Q9C0K0	894 aa	Predicted RBP	7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	PDCL3	Q9H2J4	239 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	MAP3K2	Q9Y2U5	619 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	R3HCC1	Q9Y3T6	440 aa	Known RBP	7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	RBM8A	Q9Y5S9	174 aa	Known RBP	7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	PAPPA	Q13219	1627 aa		7.12	□□□□□ -1.27
RDM1-223	ENST00000619193	ZNF609	O15014	1411 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	PLEKHG2	Q9H7P9	1386 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	ELP1	O95163	1332 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	SPATA31A1	Q5TZJ5	1347 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	UQCRHL	A0A096LP55	91 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	KDM4A	O75164	1064 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	ADCY5	O95622	1261 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	UQCRH	P07919	91 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	HSPA1A	P0DMV8	641 aa	Known RBP	7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	HSPA1B	P0DMV9	641 aa	Known RBP	7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	HCLS1	P14317	486 aa	Predicted RBP	7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	MSN	P26038	577 aa	Known RBP	7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	GTF2F1	P35269	517 aa	Known RBP eCLIP	7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	CASP7	P55210	303 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	PLEKHO1	Q53GL0	409 aa	Predicted RBP	7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	PRPF40B	Q6NWY9	871 aa	Known RBP	7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	CWC27	Q6UX04	472 aa	Known RBP	7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	MPRIP	Q6WCQ1	1025 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	CCDC83	Q8IWF9	413 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	LINS1	Q8NG48	757 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	SYAP1	Q96A49	352 aa	Predicted RBP	7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	EVI5L	Q96CN4	794 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	JAKMIP1	Q96N16	626 aa	Known RBP	7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	SH2B1	Q9NRF2	756 aa	Predicted RBP	7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	PDRG1	Q9NUG6	133 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	DBF4	Q9UBU7	674 aa	Predicted RBP	7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	USP25	Q9UHP3	1055 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	MEGF6	O75095	1541 aa		7.11	□□□□□ -1.27
RDM1-223	ENST00000619193	UBR2	Q8IWV8	1755 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	BTBD11	A6QL63	1104 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	GRM8	O00222	908 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	DYNC1I1	O14576	645 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	LETM1	O95202	739 aa	Predicted RBP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	POTEI	P0CG38	1075 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	LIG1	P18858	919 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	CAST	P20810	708 aa	Known RBP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	ADD1	P35611	737 aa	Known RBP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	REST	Q13127	1097 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	CSPP1	Q1MSJ5	1256 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	RABL6	Q3YEC7	729 aa	Predicted RBP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	AMOT	Q4VCS5	1084 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	KRT28	Q7Z3Y7	464 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	ZNF589	Q86UQ0	364 aa	Predicted RBP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	C17orf53	Q8N3J3	647 aa	Predicted RBP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	NECAB1	Q8N987	351 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	MYRIP	Q8NFW9	859 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	DDX54	Q8TDD1	881 aa	Known RBP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	JARID2	Q92833	1246 aa	Predicted RBP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	BICC1	Q9H694	974 aa	Known RBP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	DDX21	Q9NR30	783 aa	Known RBP eCLIP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	PYCARD	Q9ULZ3	195 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	SMC3	Q9UQE7	1217 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	AXIN2	Q9Y2T1	843 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	MRVI1	Q9Y6F6	885 aa		7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	AFDN	P55196	1824 aa	Known RBP	7.1	□□□□□ -1.27
RDM1-223	ENST00000619193	NEURL1B	A8MQ27	555 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	TAF5L	O75529	589 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	PHF14	O94880	888 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	RPS6KB1	P23443	525 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	LMOD2	Q6P5Q4	547 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	GIMAP6	Q6P9H5	292 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	CDC37L1	Q7L3B6	337 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	AACS	Q86V21	672 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	ERC1	Q8IUD2	1116 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	KCNH5	Q8NCM2	988 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	KIAA1524	Q8TCG1	905 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	ANP32B	Q92688	251 aa	Known RBP	7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	PGBD1	Q96JS3	809 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	ZNF830	Q96NB3	372 aa	Predicted RBP	7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	DCBLD2	Q96PD2	775 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	COPRS	Q9NQ92	184 aa		7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	7.09	□□□□□ -1.27
RDM1-223	ENST00000619193	GOLGB1	Q14789	3259 aa	Known RBP	7.08	□□□□□ -1.28
RDM1-223	ENST00000619193	FIBP	O43427	364 aa		7.08	□□□□□ -1.28
RDM1-223	ENST00000619193	GC	P02774	474 aa		7.08	□□□□□ -1.28
RDM1-223	ENST00000619193	CHGB	P05060	677 aa		7.08	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms