RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 SMARCC1Q92922 1105 aaPredicted RBP8.3□□□□□ -1.08
SRGAP3-213ENST00000618999 PRDM10Q9NQV6 1147 aa8.3□□□□□ -1.08
SRGAP3-213ENST00000618999 GPTP24298 496 aa8.3□□□□□ -1.08
SRGAP3-213ENST00000618999 RASEFQ8IZ41 740 aa8.3□□□□□ -1.08
SRGAP3-213ENST00000618999 SUCLG2Q96I99 432 aa8.3□□□□□ -1.08
SRGAP3-213ENST00000618999 ZBTB1Q9Y2K1 713 aa8.3□□□□□ -1.08
SRGAP3-213ENST00000618999 PKD1L3Q7Z443 1732 aa8.3□□□□□ -1.08
SRGAP3-213ENST00000618999 BCL9LQ86UU0 1499 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 ADCY5O95622 1261 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 BRD1O95696 1058 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 TSHZ3Q63HK5 1081 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 RGS22Q8NE09 1264 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 CHAMP1Q96JM3 812 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 CWC25Q9NXE8 425 aaPredicted RBP8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 BCL9O00512 1426 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 ATP10DQ9P241 1426 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 MRC1P22897 1456 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 KCNQ4P56696 695 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 G3BP1Q13283 466 aaKnown RBP eCLIP8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 NOLC1Q14978 699 aaKnown RBP eCLIP8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 SMAP1Q8IYB5 467 aaPredicted RBP8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 SIL1Q9H173 461 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 BICC1Q9H694 974 aaKnown RBP8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 FAM177BA6PVY3 158 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 CYP19A1P11511 503 aaPredicted RBP8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 HSP90AB4PQ58FF6 505 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 USP48Q86UV5 1035 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 SEPT12Q8IYM1 358 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 SLC4A9Q96Q91 983 aa8.29□□□□□ -1.08
SRGAP3-213ENST00000618999 VPS37CA5D8V6 355 aaPredicted RBP8.28□□□□□ -1.08
SRGAP3-213ENST00000618999 SSH3Q8TE77 659 aa8.28□□□□□ -1.08
SRGAP3-213ENST00000618999 ZNF830Q96NB3 372 aaPredicted RBP8.28□□□□□ -1.08
SRGAP3-213ENST00000618999 CCDC94Q9BW85 323 aaPredicted RBP8.28□□□□□ -1.08
SRGAP3-213ENST00000618999 PA2G4Q9UQ80 394 aaKnown RBP8.28□□□□□ -1.08
SRGAP3-213ENST00000618999 HCLS1P14317 486 aaPredicted RBP8.28□□□□□ -1.08
SRGAP3-213ENST00000618999 LRP10Q7Z4F1 713 aa8.28□□□□□ -1.08
SRGAP3-213ENST00000618999 DZIP3Q86Y13 1208 aaKnown RBP8.28□□□□□ -1.08
SRGAP3-213ENST00000618999 MYRIPQ8NFW9 859 aa8.28□□□□□ -1.08
SRGAP3-213ENST00000618999 RUFY2Q8WXA3 655 aa8.28□□□□□ -1.08
SRGAP3-213ENST00000618999 TTC12Q9H892 705 aaPredicted RBP8.28□□□□□ -1.08
SRGAP3-213ENST00000618999 PXDNLA1KZ92 1463 aa8.28□□□□□ -1.08
SRGAP3-213ENST00000618999 PALLDQ8WX93 1383 aa8.27□□□□□ -1.08
SRGAP3-213ENST00000618999 SPC24Q8NBT2 197 aa8.27□□□□□ -1.08
SRGAP3-213ENST00000618999 CCDC192P0DO97 292 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 UBE2HP62256 183 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 TCIRG1Q13488 830 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 NUTM1Q86Y26 1132 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 CNTROBQ8N137 903 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 PIBF1Q8WXW3 757 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 KIF1BPQ96EK5 621 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 CALR3Q96L12 384 aaKnown RBP8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 CCDC85AQ96PX6 553 aaPredicted RBP8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 CCDC87Q9NVE4 849 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 LRP6O75581 1613 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 RAB11FIP3O75154 756 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 CRKLP46109 303 aaKnown RBP8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 CLASRPQ8N2M8 674 aaKnown RBP8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 PDCL2Q8N4E4 241 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 RHPN1Q8TCX5 695 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 GPATCH3Q96I76 525 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 PCMTD1Q96MG8 357 aaPredicted RBP8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 NSFL1CQ9UNZ2 370 aaKnown RBP8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 ZDHHC9Q9Y397 364 aa8.27□□□□□ -1.09
SRGAP3-213ENST00000618999 CACNA1FO60840 1977 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 CBX1P83916 185 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 LMBR1LQ6UX01 489 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 CCDC191Q8NCU4 936 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 KLHDC4Q8TBB5 520 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 NLRP7Q8WX94 980 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 ADAMTS7Q9UKP4 1686 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 ZKSCAN1P17029 563 aaPredicted RBP8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 HSP90AB3PQ58FF7 597 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 PTF1AQ7RTS3 328 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 FAM89AQ96GI7 184 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 ZBTB12Q9Y330 459 aaPredicted RBP8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 PLCH1Q4KWH8 1693 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 STX6O43752 255 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 CHMLP26374 656 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 IL6STP40189 918 aaPredicted RBP8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 HLFQ16534 295 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 TAF7LQ5H9L4 462 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 EPHA10Q5JZY3 1008 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 MAP3K15Q6ZN16 1313 aa8.26□□□□□ -1.09
SRGAP3-213ENST00000618999 IFIT2P09913 472 aaKnown RBP8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 ZSCAN22P10073 491 aaPredicted RBP8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 ITPK1Q13572 414 aa8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 PPP4R3BQ5MIZ7 849 aa8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 ZHX1Q9UKY1 873 aaPredicted RBP8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 CNPY2Q9Y2B0 182 aa8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 GADD45BO75293 160 aaPredicted RBP8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 MAP4K4O95819 1239 aaPredicted RBP8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 ABL2P42684 1182 aa8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 CUL4AQ13619 759 aa8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 ERC1Q8IUD2 1116 aa8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 TRMT112Q9UI30 125 aaKnown RBP8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 LIMCH1Q9UPQ0 1083 aa8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 SIPA1L3O60292 1781 aaPredicted RBP8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 GIGYF2Q6Y7W6 1299 aaKnown RBP8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 CCDC102AQ96A19 550 aa8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 KAZALD1Q96I82 304 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms