RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 TCHPQ9BT92 498 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 TXNDC16Q9P2K2 825 aa13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 SNX16P57768 344 aa13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 TNNC1P63316 161 aa13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 ANKIB1Q9P2G1 1089 aa13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 SH3BP5O60239 455 aa13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 MRVI1Q9Y6F6 885 aa13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 BMP15O95972 392 aa13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 NFE2L2Q16236 605 aa13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 GNAT3A8MTJ3 354 aa13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 VIMP08670 466 aaKnown RBP13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 ZNF365Q70YC5 407 aa13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 MICU3Q86XE3 530 aa13.03□□□□□ -0.32
PCDHA4-204ENST00000618834 CRCPO75575 148 aa13.02□□□□□ -0.32
PCDHA4-204ENST00000618834 STMN1P16949 149 aa13.02□□□□□ -0.32
PCDHA4-204ENST00000618834 GKAP1Q5VSY0 366 aaPredicted RBP13.02□□□□□ -0.32
PCDHA4-204ENST00000618834 PRAM1Q96QH2 718 aa13.02□□□□□ -0.32
PCDHA4-204ENST00000618834 ARHGAP25P42331 645 aa13.02□□□□□ -0.32
PCDHA4-204ENST00000618834 PANK2Q9BZ23 570 aa13.02□□□□□ -0.32
PCDHA4-204ENST00000618834 GUCA1BQ9UMX6 200 aa13.02□□□□□ -0.32
PCDHA4-204ENST00000618834 UBXN1Q04323 297 aa13.02□□□□□ -0.32
PCDHA4-204ENST00000618834 SLF2Q8IX21 1173 aa13.02□□□□□ -0.32
PCDHA4-204ENST00000618834 RUSC2Q8N2Y8 1516 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 A6NNZ2 444 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 ERCC3P19447 782 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 TYRO3Q06418 890 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 TUBB8Q3ZCM7 444 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 PPP1R12CQ9BZL4 782 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 FCHSD2O94868 740 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 XRCC6P12956 609 aaKnown RBP eCLIP13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 WHAMMP3Q1A5X7 153 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 RGS22Q8NE09 1264 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 MCUR1Q96AQ8 359 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 CDK19Q9BWU1 502 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 PPP2R3AQ06190 1150 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 USP16Q9Y5T5 823 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 TERF1P54274 439 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 USP48Q86UV5 1035 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 USH1CQ9Y6N9 552 aa13.02□□□□□ -0.33
PCDHA4-204ENST00000618834 CC2D2AQ9P2K1 1620 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 IFIT1P09914 478 aaKnown RBP13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 ARID5AQ03989 594 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 ESCO1Q5FWF5 840 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 CCDC186Q7Z3E2 898 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 SAMM50Q9Y512 469 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 BMP2KLQ5H9B9 411 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 DDX27Q96GQ7 796 aaKnown RBP13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 CCDC85AQ96PX6 553 aaPredicted RBP13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 GAPVD1Q14C86 1478 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 ZNF444Q8N0Y2 327 aaPredicted RBP13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 SLC26A6Q9BXS9 759 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 TMPOP42166 694 aaKnown RBP13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 AFMP43652 599 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 GBP5Q96PP8 586 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 PPP1R1BQ9UD71 204 aaPredicted RBP13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 GPR161Q8N6U8 529 aaKnown RBP13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 MRPS27Q92552 414 aaKnown RBP13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 CFTRP13569 1480 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 IARSP41252 1262 aaKnown RBP13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 SATB1Q01826 763 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 CCDC38Q502W7 563 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 DUSP27Q5VZP5 1158 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 ZNF354CQ86Y25 554 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 ZNF652Q9Y2D9 606 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 CCDC141Q6ZP82 1450 aa13.01□□□□□ -0.33
PCDHA4-204ENST00000618834 MFSD6Q6ZSS7 791 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 GJC1P36383 396 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 ORC3Q9UBD5 711 aaPredicted RBP13□□□□□ -0.33
PCDHA4-204ENST00000618834 BICDL2A1A5D9 508 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 DCAF8L1A6NGE4 600 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 LARP6Q9BRS8 491 aaKnown RBP13□□□□□ -0.33
PCDHA4-204ENST00000618834 LZTFL1Q9NQ48 299 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 PSMA7O14818 248 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 ZNF569Q5MCW4 686 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 NEK11Q8NG66 645 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 VPS52Q8N1B4 723 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 TMEM87AQ8NBN3 555 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 CAMSAP2Q08AD1 1489 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 MAP2K2P36507 400 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 HSP90AA4PQ58FG1 418 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 ARHGAP24Q8N264 748 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 GOLGA6CA6NDK9 693 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 GOLGA6DP0CG33 693 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 GOLGA6AQ9NYA3 693 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 DAPK1P53355 1430 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 HSPA1LP34931 641 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 TSPYL2Q9H2G4 693 aaPredicted RBP13□□□□□ -0.33
PCDHA4-204ENST00000618834 RTEL1-TNFRSF6BF6WH68 1400 aa13□□□□□ -0.33
PCDHA4-204ENST00000618834 IFIT5Q13325 482 aaKnown RBP12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 UTP14AQ9BVJ6 771 aaKnown RBP12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 MYO10Q9HD67 2058 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 MAK16Q9BXY0 300 aaKnown RBP12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 MAP7Q14244 749 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 TRPC3Q13507 836 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 TTC22Q5TAA0 569 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 SEL1L2Q5TEA6 688 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 PTPRCP08575 1304 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 NDUFAB1O14561 156 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms