RNA–Protein interactions for RNA: ENST00000618773.4

UCHL3-206, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 5 BASIC

Gene UCHL3, Length 1,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-206ENST00000618773 C21orf2O43822 256 aa13.78□□□□□ -0.2
UCHL3-206ENST00000618773 LAPTM4AQ15012 233 aa13.78□□□□□ -0.2
UCHL3-206ENST00000618773 CNBD1Q8NA66 436 aa13.78□□□□□ -0.2
UCHL3-206ENST00000618773 PRKD2Q9BZL6 878 aa13.78□□□□□ -0.2
UCHL3-206ENST00000618773 GLTPD2A6NH11 291 aa13.77□□□□□ -0.21
UCHL3-206ENST00000618773 PDE6BP35913 854 aa13.77□□□□□ -0.21
UCHL3-206ENST00000618773 COPS2P61201 443 aa13.77□□□□□ -0.21
UCHL3-206ENST00000618773 FSTL1Q12841 308 aa13.77□□□□□ -0.21
UCHL3-206ENST00000618773 C16orf71Q8IYS4 520 aaPredicted RBP13.77□□□□□ -0.21
UCHL3-206ENST00000618773 SETDB2Q96T68 719 aa13.77□□□□□ -0.21
UCHL3-206ENST00000618773 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.77□□□□□ -0.21
UCHL3-206ENST00000618773 SCN4AP35499 1836 aa13.76□□□□□ -0.21
UCHL3-206ENST00000618773 POTECB2RU33 542 aa13.76□□□□□ -0.21
UCHL3-206ENST00000618773 SNRPA1P09661 255 aaKnown RBP13.76□□□□□ -0.21
UCHL3-206ENST00000618773 SRGNP10124 158 aa13.76□□□□□ -0.21
UCHL3-206ENST00000618773 PRPF40BQ6NWY9 871 aaKnown RBP13.76□□□□□ -0.21
UCHL3-206ENST00000618773 RTF1Q92541 710 aaKnown RBP13.76□□□□□ -0.21
UCHL3-206ENST00000618773 MIS18AQ9NYP9 233 aa13.76□□□□□ -0.21
UCHL3-206ENST00000618773 ADAMTSL1Q8N6G6 1762 aa13.76□□□□□ -0.21
UCHL3-206ENST00000618773 GFRA3O60609 400 aa13.75□□□□□ -0.21
UCHL3-206ENST00000618773 PTGDRQ13258 359 aa13.75□□□□□ -0.21
UCHL3-206ENST00000618773 PLEKHF1Q96S99 279 aa13.75□□□□□ -0.21
UCHL3-206ENST00000618773 THUMPD2Q9BTF0 503 aaKnown RBP13.75□□□□□ -0.21
UCHL3-206ENST00000618773 SNED1Q8TER0 1413 aa13.74□□□□□ -0.21
UCHL3-206ENST00000618773 ABCC12Q96J65 1359 aa13.74□□□□□ -0.21
UCHL3-206ENST00000618773 LTBP3Q9NS15 1303 aa13.74□□□□□ -0.21
UCHL3-206ENST00000618773 HTATSF1O43719 755 aaKnown RBP13.74□□□□□ -0.21
UCHL3-206ENST00000618773 ST5P78524 1137 aa13.74□□□□□ -0.21
UCHL3-206ENST00000618773 HLFQ16534 295 aa13.74□□□□□ -0.21
UCHL3-206ENST00000618773 STYK1Q6J9G0 422 aa13.74□□□□□ -0.21
UCHL3-206ENST00000618773 PRR14Q9BWN1 585 aa13.74□□□□□ -0.21
UCHL3-206ENST00000618773 COL4A5P29400 1685 aa13.74□□□□□ -0.21
UCHL3-206ENST00000618773 GGCXP38435 758 aa13.73□□□□□ -0.21
UCHL3-206ENST00000618773 OLFM4Q6UX06 510 aa13.73□□□□□ -0.21
UCHL3-206ENST00000618773 SMC1BQ8NDV3 1235 aa13.73□□□□□ -0.21
UCHL3-206ENST00000618773 NKX2-3Q8TAU0 364 aa13.73□□□□□ -0.21
UCHL3-206ENST00000618773 KLRG1Q96E93 195 aa13.73□□□□□ -0.21
UCHL3-206ENST00000618773 PDZRN3Q9UPQ7 1066 aa13.73□□□□□ -0.21
UCHL3-206ENST00000618773 VEGFAP15692 232 aaPredicted RBP13.72□□□□□ -0.21
UCHL3-206ENST00000618773 DNAJB2P25686 324 aa13.72□□□□□ -0.21
UCHL3-206ENST00000618773 TAF7Q15545 349 aaPredicted RBP13.72□□□□□ -0.21
UCHL3-206ENST00000618773 ERFEQ4G0M1 354 aa13.72□□□□□ -0.21
UCHL3-206ENST00000618773 CLEC4GQ6UXB4 293 aa13.72□□□□□ -0.21
UCHL3-206ENST00000618773 NBPF5PQ86XG9 351 aaPredicted RBP13.72□□□□□ -0.21
UCHL3-206ENST00000618773 C7orf43Q8WVR3 580 aa13.72□□□□□ -0.21
UCHL3-206ENST00000618773 MASTLQ96GX5 879 aa13.72□□□□□ -0.21
UCHL3-206ENST00000618773 TAOK3Q9H2K8 898 aa13.72□□□□□ -0.21
UCHL3-206ENST00000618773 LTBP1Q14766 1721 aa13.72□□□□□ -0.21
UCHL3-206ENST00000618773 TAF1P21675 1872 aa13.72□□□□□ -0.21
UCHL3-206ENST00000618773 FAM177BA6PVY3 158 aa13.71□□□□□ -0.21
UCHL3-206ENST00000618773 NPHP1O15259 732 aa13.71□□□□□ -0.21
UCHL3-206ENST00000618773 NPM2Q86SE8 214 aaKnown RBP13.71□□□□□ -0.21
UCHL3-206ENST00000618773 SLC51AQ86UW1 340 aa13.71□□□□□ -0.21
UCHL3-206ENST00000618773 JMYQ8N9B5 988 aa13.71□□□□□ -0.21
UCHL3-206ENST00000618773 CNKSR1Q969H4 720 aa13.71□□□□□ -0.21
UCHL3-206ENST00000618773 NIP7Q9Y221 180 aaKnown RBP eCLIP13.71□□□□□ -0.21
UCHL3-206ENST00000618773 KLRG2A4D1S0 409 aaPredicted RBP13.7□□□□□ -0.22
UCHL3-206ENST00000618773 EIF4A1P60842 406 aaKnown RBP13.7□□□□□ -0.22
UCHL3-206ENST00000618773 NFE2L2Q16236 605 aa13.7□□□□□ -0.22
UCHL3-206ENST00000618773 ZNF652Q9Y2D9 606 aa13.7□□□□□ -0.22
UCHL3-206ENST00000618773 V9GY48 417 aaPredicted RBP13.7□□□□□ -0.22
UCHL3-206ENST00000618773 UBN2Q6ZU65 1347 aa13.69□□□□□ -0.22
UCHL3-206ENST00000618773 DDNO94850 711 aaPredicted RBP13.69□□□□□ -0.22
UCHL3-206ENST00000618773 TTLL7Q6ZT98 887 aa13.69□□□□□ -0.22
UCHL3-206ENST00000618773 PCDHB3Q9Y5E6 796 aa13.69□□□□□ -0.22
UCHL3-206ENST00000618773 DDX60Q8IY21 1712 aaKnown RBP13.69□□□□□ -0.22
UCHL3-206ENST00000618773 ZNF541Q9H0D2 1346 aa13.68□□□□□ -0.22
UCHL3-206ENST00000618773 RIC1Q4ADV7 1423 aa13.68□□□□□ -0.22
UCHL3-206ENST00000618773 NPR1P16066 1061 aa13.68□□□□□ -0.22
UCHL3-206ENST00000618773 NGEFQ8N5V2 710 aa13.68□□□□□ -0.22
UCHL3-206ENST00000618773 MAP3K15Q6ZN16 1313 aa13.67□□□□□ -0.22
UCHL3-206ENST00000618773 CCDC93Q567U6 631 aa13.67□□□□□ -0.22
UCHL3-206ENST00000618773 NUTM1Q86Y26 1132 aa13.67□□□□□ -0.22
UCHL3-206ENST00000618773 ZNF277Q9NRM2 450 aaPredicted RBP13.67□□□□□ -0.22
UCHL3-206ENST00000618773 ADGRG1Q9Y653 693 aa13.67□□□□□ -0.22
UCHL3-206ENST00000618773 MYL6BP14649 208 aa13.66□□□□□ -0.22
UCHL3-206ENST00000618773 FKBP4Q02790 459 aaKnown RBP eCLIP13.66□□□□□ -0.22
UCHL3-206ENST00000618773 SOGA3Q5TF21 947 aa13.66□□□□□ -0.22
UCHL3-206ENST00000618773 TPTE2Q6XPS3 522 aa13.66□□□□□ -0.22
UCHL3-206ENST00000618773 LRP10Q7Z4F1 713 aa13.66□□□□□ -0.22
UCHL3-206ENST00000618773 RRP7AQ9Y3A4 280 aaKnown RBP13.66□□□□□ -0.22
UCHL3-206ENST00000618773 IBTKQ9P2D0 1353 aaPredicted RBP13.66□□□□□ -0.22
UCHL3-206ENST00000618773 LRRC37AA6NMS7 1700 aa13.65□□□□□ -0.22
UCHL3-206ENST00000618773 GPTP24298 496 aa13.65□□□□□ -0.22
UCHL3-206ENST00000618773 CRY2Q49AN0 593 aa13.65□□□□□ -0.22
UCHL3-206ENST00000618773 PNISRQ8TF01 805 aaKnown RBP13.65□□□□□ -0.22
UCHL3-206ENST00000618773 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
UCHL3-206ENST00000618773 TMEM134Q9H6X4 195 aa13.65□□□□□ -0.22
UCHL3-206ENST00000618773 COL4A1P02462 1669 aa13.65□□□□□ -0.22
UCHL3-206ENST00000618773 MAPK8IP3Q9UPT6 1336 aa13.64□□□□□ -0.23
UCHL3-206ENST00000618773 ERVV-1B6SEH8 477 aa13.64□□□□□ -0.23
UCHL3-206ENST00000618773 PROSER3Q2NL68 480 aa13.64□□□□□ -0.23
UCHL3-206ENST00000618773 TMUB1Q9BVT8 246 aa13.64□□□□□ -0.23
UCHL3-206ENST00000618773 TRPM7Q96QT4 1865 aa13.63□□□□□ -0.23
UCHL3-206ENST00000618773 RCCD1A6NED2 376 aa13.63□□□□□ -0.23
UCHL3-206ENST00000618773 SEMA3EO15041 775 aa13.63□□□□□ -0.23
UCHL3-206ENST00000618773 NTSR2O95665 410 aa13.63□□□□□ -0.23
UCHL3-206ENST00000618773 FAM161AQ3B820 660 aa13.63□□□□□ -0.23
UCHL3-206ENST00000618773 KMT5BQ4FZB7 885 aa13.63□□□□□ -0.23
UCHL3-206ENST00000618773 COL13A1Q5TAT6 717 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms