RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 ZGPATQ8N5A5 531 aaKnown RBP30.5■■■□□ 2.47
VEGFC-202ENST00000618562 LSG1Q9H089 658 aaKnown RBP30.5■■■□□ 2.47
VEGFC-202ENST00000618562 NDUFB9Q9Y6M9 179 aa30.5■■■□□ 2.47
VEGFC-202ENST00000618562 RAD50Q92878 1312 aa30.5■■■□□ 2.47
VEGFC-202ENST00000618562 C4BP0C0L5 1744 aa30.5■■■□□ 2.47
VEGFC-202ENST00000618562 RGL2O15211 777 aa30.5■■■□□ 2.47
VEGFC-202ENST00000618562 GRPEL1Q9HAV7 217 aa30.5■■■□□ 2.47
VEGFC-202ENST00000618562 BCL2L12Q9HB09 334 aa30.5■■■□□ 2.47
VEGFC-202ENST00000618562 PALD1Q9ULE6 856 aa30.5■■■□□ 2.47
VEGFC-202ENST00000618562 HIP1O00291 1037 aa30.49■■■□□ 2.47
VEGFC-202ENST00000618562 AMIGO3Q86WK7 504 aa30.49■■■□□ 2.47
VEGFC-202ENST00000618562 TMX3Q96JJ7 454 aa30.48■■■□□ 2.47
VEGFC-202ENST00000618562 NARFQ9UHQ1 456 aa30.48■■■□□ 2.47
VEGFC-202ENST00000618562 AKAP2Q9Y2D5 859 aa30.48■■■□□ 2.47
VEGFC-202ENST00000618562 FAM227BQ96M60 508 aa30.48■■■□□ 2.47
VEGFC-202ENST00000618562 CUL4AQ13619 759 aa30.47■■■□□ 2.47
VEGFC-202ENST00000618562 KRT27Q7Z3Y8 459 aa30.47■■■□□ 2.47
VEGFC-202ENST00000618562 DNAJC2Q99543 621 aaKnown RBP30.47■■■□□ 2.47
VEGFC-202ENST00000618562 NMIQ13287 307 aaPredicted RBP30.46■■■□□ 2.47
VEGFC-202ENST00000618562 HSPA4P34932 840 aa30.46■■■□□ 2.47
VEGFC-202ENST00000618562 METTL24Q5JXM2 366 aa30.46■■■□□ 2.47
VEGFC-202ENST00000618562 USPL1Q5W0Q7 1092 aa30.46■■■□□ 2.47
VEGFC-202ENST00000618562 CNNM1Q9NRU3 951 aa30.46■■■□□ 2.47
VEGFC-202ENST00000618562 SRP68Q9UHB9 627 aaKnown RBP30.46■■■□□ 2.47
VEGFC-202ENST00000618562 RTCBQ9Y3I0 505 aaKnown RBP30.46■■■□□ 2.47
VEGFC-202ENST00000618562 PKP1Q13835 747 aa30.45■■■□□ 2.47
VEGFC-202ENST00000618562 FAM196AQ6ZSG2 479 aa30.45■■■□□ 2.47
VEGFC-202ENST00000618562 TBC1D9BQ66K14 1250 aa30.45■■■□□ 2.46
VEGFC-202ENST00000618562 KIAA1211Q6ZU35 1233 aa30.45■■■□□ 2.46
VEGFC-202ENST00000618562 VGLL2Q8N8G2 317 aa30.45■■■□□ 2.46
VEGFC-202ENST00000618562 INTS4Q96HW7 963 aaKnown RBP30.45■■■□□ 2.46
VEGFC-202ENST00000618562 C4AP0C0L4 1744 aa30.44■■■□□ 2.46
VEGFC-202ENST00000618562 ADORA1P30542 326 aa30.44■■■□□ 2.46
VEGFC-202ENST00000618562 LRRC4BQ9NT99 713 aa30.44■■■□□ 2.46
VEGFC-202ENST00000618562 DDX49Q9Y6V7 483 aaKnown RBP30.44■■■□□ 2.46
VEGFC-202ENST00000618562 A0A0D9SFI3 127 aa30.43■■■□□ 2.46
VEGFC-202ENST00000618562 HSP90B1P14625 803 aaKnown RBP30.43■■■□□ 2.46
VEGFC-202ENST00000618562 XAGE2Q96GT9 111 aa30.43■■■□□ 2.46
VEGFC-202ENST00000618562 PANK2Q9BZ23 570 aa30.43■■■□□ 2.46
VEGFC-202ENST00000618562 SNRKQ9NRH2 765 aa30.43■■■□□ 2.46
VEGFC-202ENST00000618562 MCTP1Q6DN14 999 aa30.43■■■□□ 2.46
VEGFC-202ENST00000618562 RFX7Q2KHR2 1363 aa30.43■■■□□ 2.46
VEGFC-202ENST00000618562 CASZ1Q86V15 1759 aa30.42■■■□□ 2.46
VEGFC-202ENST00000618562 SEC31BQ9NQW1 1179 aa30.42■■■□□ 2.46
VEGFC-202ENST00000618562 RTL9Q8NET4 1388 aa30.42■■■□□ 2.46
VEGFC-202ENST00000618562 COL24A1Q17RW2 1714 aa30.42■■■□□ 2.46
VEGFC-202ENST00000618562 PTH1RQ03431 593 aa30.42■■■□□ 2.46
VEGFC-202ENST00000618562 CCDC152Q4G0S7 254 aa30.42■■■□□ 2.46
VEGFC-202ENST00000618562 BICDL1Q6ZP65 573 aa30.42■■■□□ 2.46
VEGFC-202ENST00000618562 DDX46Q7L014 1031 aaKnown RBP30.42■■■□□ 2.46
VEGFC-202ENST00000618562 ARHGEF1Q92888 912 aaKnown RBP30.42■■■□□ 2.46
VEGFC-202ENST00000618562 ZDHHC9Q9Y397 364 aa30.42■■■□□ 2.46
VEGFC-202ENST00000618562 ATP2B3Q16720 1220 aa30.41■■■□□ 2.46
VEGFC-202ENST00000618562 ERFEQ4G0M1 354 aa30.41■■■□□ 2.46
VEGFC-202ENST00000618562 SPEF2Q9C093 1822 aa30.41■■■□□ 2.46
VEGFC-202ENST00000618562 ZPR1O75312 459 aa30.4■■■□□ 2.46
VEGFC-202ENST00000618562 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.4■■■□□ 2.46
VEGFC-202ENST00000618562 IFIT1P09914 478 aaKnown RBP30.4■■■□□ 2.46
VEGFC-202ENST00000618562 LMBRD1Q9NUN5 540 aa30.4■■■□□ 2.46
VEGFC-202ENST00000618562 PAG1Q9NWQ8 432 aa30.4■■■□□ 2.46
VEGFC-202ENST00000618562 MED23Q9ULK4 1368 aa30.4■■■□□ 2.46
VEGFC-202ENST00000618562 KBTBD3Q8NAB2 608 aa30.39■■■□□ 2.46
VEGFC-202ENST00000618562 PDE8BO95263 885 aa30.38■■■□□ 2.45
VEGFC-202ENST00000618562 CCDC158Q5M9N0 1113 aa30.38■■■□□ 2.45
VEGFC-202ENST00000618562 CCDC171Q6TFL3 1326 aa30.38■■■□□ 2.45
VEGFC-202ENST00000618562 GOLIM4O00461 696 aa30.38■■■□□ 2.45
VEGFC-202ENST00000618562 TRIM37O94972 964 aa30.38■■■□□ 2.45
VEGFC-202ENST00000618562 GORABQ5T7V8 394 aa30.38■■■□□ 2.45
VEGFC-202ENST00000618562 ZNF772Q68DY9 489 aaPredicted RBP30.38■■■□□ 2.45
VEGFC-202ENST00000618562 GAS2L3Q86XJ1 694 aa30.38■■■□□ 2.45
VEGFC-202ENST00000618562 COL4A1P02462 1669 aa30.37■■■□□ 2.45
VEGFC-202ENST00000618562 MROH5Q6ZUA9 1318 aa30.37■■■□□ 2.45
VEGFC-202ENST00000618562 CHGBP05060 677 aa30.37■■■□□ 2.45
VEGFC-202ENST00000618562 RBM6P78332 1123 aaKnown RBP30.37■■■□□ 2.45
VEGFC-202ENST00000618562 TTC39AQ5SRH9 613 aa30.36■■■□□ 2.45
VEGFC-202ENST00000618562 UBR3Q6ZT12 1888 aa30.36■■■□□ 2.45
VEGFC-202ENST00000618562 C3orf67Q6ZVT6 689 aa30.35■■■□□ 2.45
VEGFC-202ENST00000618562 ZNF589Q86UQ0 364 aaPredicted RBP30.35■■■□□ 2.45
VEGFC-202ENST00000618562 SETDB2Q96T68 719 aa30.35■■■□□ 2.45
VEGFC-202ENST00000618562 SNX14Q9Y5W7 946 aa30.35■■■□□ 2.45
VEGFC-202ENST00000618562 ABCC12Q96J65 1359 aa30.35■■■□□ 2.45
VEGFC-202ENST00000618562 PHF14O94880 888 aa30.35■■■□□ 2.45
VEGFC-202ENST00000618562 RASEFQ8IZ41 740 aa30.35■■■□□ 2.45
VEGFC-202ENST00000618562 MPHOSPH8Q99549 860 aa30.35■■■□□ 2.45
VEGFC-202ENST00000618562 ARAP2Q8WZ64 1704 aa30.34■■■□□ 2.45
VEGFC-202ENST00000618562 TRAPPC3LQ5T215 181 aa30.34■■■□□ 2.45
VEGFC-202ENST00000618562 UPF3BQ9BZI7 483 aaKnown RBP30.34■■■□□ 2.45
VEGFC-202ENST00000618562 HELBQ8NG08 1087 aaPredicted RBP30.34■■■□□ 2.45
VEGFC-202ENST00000618562 BRD1O95696 1058 aa30.33■■■□□ 2.45
VEGFC-202ENST00000618562 SCARF1Q14162 830 aa30.33■■■□□ 2.45
VEGFC-202ENST00000618562 SLC10A5Q5PT55 438 aa30.33■■■□□ 2.45
VEGFC-202ENST00000618562 MAP4K1Q92918 833 aa30.33■■■□□ 2.45
VEGFC-202ENST00000618562 AKAP11Q9UKA4 1901 aa30.32■■■□□ 2.44
VEGFC-202ENST00000618562 RFC4P35249 363 aa30.32■■■□□ 2.44
VEGFC-202ENST00000618562 SF3B3Q15393 1217 aaKnown RBP30.32■■■□□ 2.44
VEGFC-202ENST00000618562 NYXQ9GZU5 481 aa30.32■■■□□ 2.44
VEGFC-202ENST00000618562 FGFR2P21802 821 aa30.32■■■□□ 2.44
VEGFC-202ENST00000618562 PUM3Q15397 648 aaKnown RBP30.32■■■□□ 2.44
VEGFC-202ENST00000618562 SLC27A3Q5K4L6 730 aa30.32■■■□□ 2.44
VEGFC-202ENST00000618562 TAF1P21675 1872 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms