RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 XAGE2Q96GT9 111 aa16.62■□□□□ 0.25
CBWD1-226ENST00000618061 LRRC2Q9BYS8 371 aa16.62■□□□□ 0.25
CBWD1-226ENST00000618061 GPR108Q9NPR9 543 aa16.62■□□□□ 0.25
CBWD1-226ENST00000618061 HSP90AB3PQ58FF7 597 aa16.62■□□□□ 0.25
CBWD1-226ENST00000618061 GORABQ5T7V8 394 aa16.62■□□□□ 0.25
CBWD1-226ENST00000618061 USPL1Q5W0Q7 1092 aa16.62■□□□□ 0.25
CBWD1-226ENST00000618061 LRP6O75581 1613 aa16.62■□□□□ 0.25
CBWD1-226ENST00000618061 PLCH1Q4KWH8 1693 aa16.62■□□□□ 0.25
CBWD1-226ENST00000618061 CSF1RP07333 972 aa16.61■□□□□ 0.25
CBWD1-226ENST00000618061 PIP4K2BP78356 416 aa16.61■□□□□ 0.25
CBWD1-226ENST00000618061 DZIP3Q86Y13 1208 aaKnown RBP16.61■□□□□ 0.25
CBWD1-226ENST00000618061 TRMT112Q9UI30 125 aaKnown RBP16.61■□□□□ 0.25
CBWD1-226ENST00000618061 AHDC1Q5TGY3 1603 aaPredicted RBP16.61■□□□□ 0.25
CBWD1-226ENST00000618061 SYCE3A1L190 88 aa16.61■□□□□ 0.25
CBWD1-226ENST00000618061 ITGA6P23229 1130 aa16.61■□□□□ 0.25
CBWD1-226ENST00000618061 DDB1Q16531 1140 aa16.61■□□□□ 0.25
CBWD1-226ENST00000618061 TTLL11Q8NHH1 800 aa16.61■□□□□ 0.25
CBWD1-226ENST00000618061 ZSCAN31Q96LW9 406 aaPredicted RBP16.61■□□□□ 0.25
CBWD1-226ENST00000618061 SH2B1Q9NRF2 756 aaPredicted RBP16.61■□□□□ 0.25
CBWD1-226ENST00000618061 NUP98P52948 1817 aa16.61■□□□□ 0.25
CBWD1-226ENST00000618061 WNK3Q9BYP7 1800 aa16.61■□□□□ 0.25
CBWD1-226ENST00000618061 COL22A1Q8NFW1 1626 aaPredicted RBP16.6■□□□□ 0.25
CBWD1-226ENST00000618061 VPS37CA5D8V6 355 aaPredicted RBP16.6■□□□□ 0.25
CBWD1-226ENST00000618061 IRS4O14654 1257 aaPredicted RBP16.6■□□□□ 0.25
CBWD1-226ENST00000618061 TTC39AQ5SRH9 613 aa16.6■□□□□ 0.25
CBWD1-226ENST00000618061 STOX1Q6ZVD7 989 aa16.6■□□□□ 0.25
CBWD1-226ENST00000618061 UBN2Q6ZU65 1347 aa16.6■□□□□ 0.25
CBWD1-226ENST00000618061 PALLDQ8WX93 1383 aa16.6■□□□□ 0.25
CBWD1-226ENST00000618061 M0R2C6 588 aa16.6■□□□□ 0.25
CBWD1-226ENST00000618061 F13A1P00488 732 aa16.6■□□□□ 0.25
CBWD1-226ENST00000618061 ZNF445P59923 1031 aa16.6■□□□□ 0.25
CBWD1-226ENST00000618061 NEK1Q96PY6 1258 aa16.6■□□□□ 0.25
CBWD1-226ENST00000618061 HMG20BQ9P0W2 317 aa16.6■□□□□ 0.25
CBWD1-226ENST00000618061 SPATA31A1Q5TZJ5 1347 aa16.6■□□□□ 0.25
CBWD1-226ENST00000618061 SH3TC1Q8TE82 1336 aa16.59■□□□□ 0.25
CBWD1-226ENST00000618061 METTL24Q5JXM2 366 aa16.59■□□□□ 0.25
CBWD1-226ENST00000618061 LDHAL6AQ6ZMR3 332 aa16.59■□□□□ 0.25
CBWD1-226ENST00000618061 MARCH10Q8NA82 808 aaPredicted RBP16.59■□□□□ 0.25
CBWD1-226ENST00000618061 PLA2G12BQ9BX93 195 aa16.59■□□□□ 0.25
CBWD1-226ENST00000618061 ISY1Q9ULR0 285 aaKnown RBP16.59■□□□□ 0.25
CBWD1-226ENST00000618061 MTMR6Q9Y217 621 aa16.59■□□□□ 0.25
CBWD1-226ENST00000618061 MAST3O60307 1309 aa16.58■□□□□ 0.25
CBWD1-226ENST00000618061 CTSWP56202 376 aa16.58■□□□□ 0.25
CBWD1-226ENST00000618061 Q6ZUG5 572 aa16.58■□□□□ 0.25
CBWD1-226ENST00000618061 RBSNQ9H1K0 784 aa16.58■□□□□ 0.25
CBWD1-226ENST00000618061 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.25
CBWD1-226ENST00000618061 PHLPP1O60346 1717 aa16.58■□□□□ 0.25
CBWD1-226ENST00000618061 RFX7Q2KHR2 1363 aa16.58■□□□□ 0.24
CBWD1-226ENST00000618061 FIBPO43427 364 aa16.58■□□□□ 0.24
CBWD1-226ENST00000618061 ATP6V1AP38606 617 aa16.58■□□□□ 0.24
CBWD1-226ENST00000618061 ZAP70P43403 619 aa16.58■□□□□ 0.24
CBWD1-226ENST00000618061 TSGA10IPQ3SY00 556 aa16.58■□□□□ 0.24
CBWD1-226ENST00000618061 CCDC158Q5M9N0 1113 aa16.58■□□□□ 0.24
CBWD1-226ENST00000618061 ZMYM1Q5SVZ6 1142 aa16.58■□□□□ 0.24
CBWD1-226ENST00000618061 RRAGDQ9NQL2 400 aaPredicted RBP16.58■□□□□ 0.24
CBWD1-226ENST00000618061 CNNM1Q9NRU3 951 aa16.58■□□□□ 0.24
CBWD1-226ENST00000618061 RIC1Q4ADV7 1423 aa16.57■□□□□ 0.24
CBWD1-226ENST00000618061 LAMA4Q16363 1823 aa16.57■□□□□ 0.24
CBWD1-226ENST00000618061 ANKRD36CQ5JPF3 1778 aa16.57■□□□□ 0.24
CBWD1-226ENST00000618061 RNF113AO15541 343 aaKnown RBP16.57■□□□□ 0.24
CBWD1-226ENST00000618061 NASPP49321 788 aaPredicted RBP16.57■□□□□ 0.24
CBWD1-226ENST00000618061 TTLL5Q6EMB2 1281 aa16.57■□□□□ 0.24
CBWD1-226ENST00000618061 FERMT3Q86UX7 667 aa16.57■□□□□ 0.24
CBWD1-226ENST00000618061 OSBP2Q969R2 916 aa16.57■□□□□ 0.24
CBWD1-226ENST00000618061 RIPOR2Q9Y4F9 1068 aa16.57■□□□□ 0.24
CBWD1-226ENST00000618061 SLIT2O94813 1529 aa16.57■□□□□ 0.24
CBWD1-226ENST00000618061 HSPD1P10809 573 aaKnown RBP16.57■□□□□ 0.24
CBWD1-226ENST00000618061 DNM1Q05193 864 aaKnown RBP16.57■□□□□ 0.24
CBWD1-226ENST00000618061 FAM173BQ6P4H8 233 aa16.57■□□□□ 0.24
CBWD1-226ENST00000618061 CHST3Q7LGC8 479 aa16.57■□□□□ 0.24
CBWD1-226ENST00000618061 HELBQ8NG08 1087 aaPredicted RBP16.57■□□□□ 0.24
CBWD1-226ENST00000618061 HELLSQ9NRZ9 838 aa16.57■□□□□ 0.24
CBWD1-226ENST00000618061 CDHR2Q9BYE9 1310 aa16.56■□□□□ 0.24
CBWD1-226ENST00000618061 KCNQ2O43526 872 aa16.56■□□□□ 0.24
CBWD1-226ENST00000618061 HCLS1P14317 486 aaPredicted RBP16.56■□□□□ 0.24
CBWD1-226ENST00000618061 HSP90B1P14625 803 aaKnown RBP16.56■□□□□ 0.24
CBWD1-226ENST00000618061 LARP1BQ659C4 914 aaKnown RBP16.56■□□□□ 0.24
CBWD1-226ENST00000618061 INTS5Q6P9B9 1019 aaKnown RBP16.56■□□□□ 0.24
CBWD1-226ENST00000618061 AKAP2Q9Y2D5 859 aa16.56■□□□□ 0.24
CBWD1-226ENST00000618061 MYH3P11055 1940 aa16.56■□□□□ 0.24
CBWD1-226ENST00000618061 ANKRD18BA2A2Z9 1011 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 JAK2O60674 1132 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 MBD3O95983 291 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 IL6STP40189 918 aaPredicted RBP16.55■□□□□ 0.24
CBWD1-226ENST00000618061 ITPK1Q13572 414 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 ATP2B3Q16720 1220 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 WASHC4Q2M389 1173 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 CDC37L1Q7L3B6 337 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 NRAPQ86VF7 1730 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 SNAP23O00161 211 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 CRKLP46109 303 aaKnown RBP16.55■□□□□ 0.24
CBWD1-226ENST00000618061 KCNQ4P56696 695 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 KRT32Q14532 448 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 ANKRD1Q15327 319 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 SUSD4Q5VX71 490 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 BRF1Q92994 677 aa16.55■□□□□ 0.24
CBWD1-226ENST00000618061 PPFIA3O75145 1194 aa16.54■□□□□ 0.24
CBWD1-226ENST00000618061 LTBP4Q8N2S1 1624 aa16.54■□□□□ 0.24
CBWD1-226ENST00000618061 MCAMP43121 646 aa16.54■□□□□ 0.24
CBWD1-226ENST00000618061 HAND2P61296 217 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms