RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 OSBPL3Q9H4L5 887 aa16.89■□□□□ 0.3
TMEM254-213ENST00000613758 STAP2Q9UGK3 403 aa16.89■□□□□ 0.3
TMEM254-213ENST00000613758 PSDA5PKW4 1024 aaPredicted RBP16.89■□□□□ 0.29
TMEM254-213ENST00000613758 HOXA10P31260 410 aaPredicted RBP16.89■□□□□ 0.29
TMEM254-213ENST00000613758 GRAPQ13588 217 aa16.89■□□□□ 0.29
TMEM254-213ENST00000613758 GRAPLQ8TC17 118 aaPredicted RBP16.89■□□□□ 0.29
TMEM254-213ENST00000613758 MTFR1LQ9H019 292 aa16.89■□□□□ 0.29
TMEM254-213ENST00000613758 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
TMEM254-213ENST00000613758 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.29
TMEM254-213ENST00000613758 COL4A1P02462 1669 aa16.88■□□□□ 0.29
TMEM254-213ENST00000613758 LRP5O75197 1615 aa16.88■□□□□ 0.29
TMEM254-213ENST00000613758 HELBQ8NG08 1087 aaPredicted RBP16.88■□□□□ 0.29
TMEM254-213ENST00000613758 PDE8BO95263 885 aa16.88■□□□□ 0.29
TMEM254-213ENST00000613758 TIMM10P62072 90 aa16.88■□□□□ 0.29
TMEM254-213ENST00000613758 TSHZ3Q63HK5 1081 aa16.88■□□□□ 0.29
TMEM254-213ENST00000613758 VGLL2Q8N8G2 317 aa16.88■□□□□ 0.29
TMEM254-213ENST00000613758 NEUROD6Q96NK8 337 aa16.88■□□□□ 0.29
TMEM254-213ENST00000613758 TAF1P21675 1872 aa16.87■□□□□ 0.29
TMEM254-213ENST00000613758 SRGNP10124 158 aa16.87■□□□□ 0.29
TMEM254-213ENST00000613758 CRAMP1Q96RY5 1269 aa16.87■□□□□ 0.29
TMEM254-213ENST00000613758 TLR7Q9NYK1 1049 aaKnown RBP16.87■□□□□ 0.29
TMEM254-213ENST00000613758 ANKRD31Q8N7Z5 1873 aa16.87■□□□□ 0.29
TMEM254-213ENST00000613758 A0A1B0GUL7 405 aa16.87■□□□□ 0.29
TMEM254-213ENST00000613758 CHRNDQ07001 517 aa16.87■□□□□ 0.29
TMEM254-213ENST00000613758 GPATCH3Q96I76 525 aa16.87■□□□□ 0.29
TMEM254-213ENST00000613758 DBNLQ9UJU6 430 aaKnown RBP16.87■□□□□ 0.29
TMEM254-213ENST00000613758 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
TMEM254-213ENST00000613758 NPR1P16066 1061 aa16.86■□□□□ 0.29
TMEM254-213ENST00000613758 ATP2B3Q16720 1220 aa16.86■□□□□ 0.29
TMEM254-213ENST00000613758 TTC22Q5TAA0 569 aa16.86■□□□□ 0.29
TMEM254-213ENST00000613758 DBNDD2Q9BQY9 259 aa16.86■□□□□ 0.29
TMEM254-213ENST00000613758 ECHDC1Q9NTX5 307 aa16.86■□□□□ 0.29
TMEM254-213ENST00000613758 AOX1Q06278 1338 aa16.85■□□□□ 0.29
TMEM254-213ENST00000613758 TTC41PQ6P2S7 1318 aa16.85■□□□□ 0.29
TMEM254-213ENST00000613758 TAF5LO75529 589 aa16.85■□□□□ 0.29
TMEM254-213ENST00000613758 POLD1P28340 1107 aa16.85■□□□□ 0.29
TMEM254-213ENST00000613758 C2CD5Q86YS7 1000 aa16.85■□□□□ 0.29
TMEM254-213ENST00000613758 BBOX1O75936 387 aa16.85■□□□□ 0.29
TMEM254-213ENST00000613758 BMP2KLQ5H9B9 411 aa16.85■□□□□ 0.29
TMEM254-213ENST00000613758 MASTLQ96GX5 879 aa16.85■□□□□ 0.29
TMEM254-213ENST00000613758 ZNF609O15014 1411 aa16.85■□□□□ 0.29
TMEM254-213ENST00000613758 SPEF2Q9C093 1822 aa16.84■□□□□ 0.29
TMEM254-213ENST00000613758 H0YIN7 160 aa16.84■□□□□ 0.29
TMEM254-213ENST00000613758 PUM3Q15397 648 aaKnown RBP16.84■□□□□ 0.29
TMEM254-213ENST00000613758 ERC2O15083 957 aa16.84■□□□□ 0.29
TMEM254-213ENST00000613758 GSPT1P15170 499 aaKnown RBP16.84■□□□□ 0.29
TMEM254-213ENST00000613758 PI4K2BQ8TCG2 481 aa16.84■□□□□ 0.29
TMEM254-213ENST00000613758 FGFR2P21802 821 aa16.83■□□□□ 0.28
TMEM254-213ENST00000613758 ALDH1B1P30837 517 aa16.83■□□□□ 0.28
TMEM254-213ENST00000613758 LPIN2Q92539 896 aa16.83■□□□□ 0.28
TMEM254-213ENST00000613758 XAGE2Q96GT9 111 aa16.83■□□□□ 0.28
TMEM254-213ENST00000613758 ANKRD2Q9GZV1 360 aa16.83■□□□□ 0.28
TMEM254-213ENST00000613758 GLRX3O76003 335 aaKnown RBP16.82■□□□□ 0.28
TMEM254-213ENST00000613758 ZNF622Q969S3 477 aaKnown RBP eCLIP16.82■□□□□ 0.28
TMEM254-213ENST00000613758 SNAP23O00161 211 aa16.82■□□□□ 0.28
TMEM254-213ENST00000613758 CHRNA5P30532 468 aa16.82■□□□□ 0.28
TMEM254-213ENST00000613758 ADORA1P30542 326 aa16.82■□□□□ 0.28
TMEM254-213ENST00000613758 GORABQ5T7V8 394 aa16.82■□□□□ 0.28
TMEM254-213ENST00000613758 STYK1Q6J9G0 422 aa16.82■□□□□ 0.28
TMEM254-213ENST00000613758 C10orf71Q711Q0 1435 aa16.82■□□□□ 0.28
TMEM254-213ENST00000613758 SLC5A1P13866 664 aa16.81■□□□□ 0.28
TMEM254-213ENST00000613758 ATP5JP18859 108 aa16.81■□□□□ 0.28
TMEM254-213ENST00000613758 TMC4Q7Z404 712 aa16.81■□□□□ 0.28
TMEM254-213ENST00000613758 PPEF1O14829 653 aaPredicted RBP16.8■□□□□ 0.28
TMEM254-213ENST00000613758 IFIT1P09914 478 aaKnown RBP16.8■□□□□ 0.28
TMEM254-213ENST00000613758 SDSP20132 328 aa16.8■□□□□ 0.28
TMEM254-213ENST00000613758 UBE4AQ14139 1066 aa16.8■□□□□ 0.28
TMEM254-213ENST00000613758 CCDC158Q5M9N0 1113 aa16.8■□□□□ 0.28
TMEM254-213ENST00000613758 SGIP1Q9BQI5 828 aa16.8■□□□□ 0.28
TMEM254-213ENST00000613758 SEC24BO95487 1268 aa16.79■□□□□ 0.28
TMEM254-213ENST00000613758 SLC51AQ86UW1 340 aa16.79■□□□□ 0.28
TMEM254-213ENST00000613758 SP8Q8IXZ3 490 aa16.79■□□□□ 0.28
TMEM254-213ENST00000613758 BOLA2Q9H3K6 86 aa16.79■□□□□ 0.28
TMEM254-213ENST00000613758 WTIPA6NIX2 430 aaPredicted RBP16.79■□□□□ 0.28
TMEM254-213ENST00000613758 KCNJ4P48050 445 aa16.79■□□□□ 0.28
TMEM254-213ENST00000613758 ANKIB1Q9P2G1 1089 aa16.79■□□□□ 0.28
TMEM254-213ENST00000613758 COL11A2P13942 1736 aaPredicted RBP16.79■□□□□ 0.28
TMEM254-213ENST00000613758 TRIM6-TRIM34B2RNG4 842 aa16.78■□□□□ 0.28
TMEM254-213ENST00000613758 MAP4K4O95819 1239 aaPredicted RBP16.78■□□□□ 0.28
TMEM254-213ENST00000613758 TTC39AQ5SRH9 613 aa16.78■□□□□ 0.28
TMEM254-213ENST00000613758 CNKSR1Q969H4 720 aa16.78■□□□□ 0.28
TMEM254-213ENST00000613758 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
TMEM254-213ENST00000613758 PTGER2P43116 358 aa16.78■□□□□ 0.28
TMEM254-213ENST00000613758 GPSM2P81274 684 aa16.78■□□□□ 0.28
TMEM254-213ENST00000613758 RILPL2Q969X0 211 aa16.78■□□□□ 0.28
TMEM254-213ENST00000613758 XDHP47989 1333 aa16.78■□□□□ 0.28
TMEM254-213ENST00000613758 NSFL1CQ9UNZ2 370 aaKnown RBP16.77■□□□□ 0.28
TMEM254-213ENST00000613758 LEMD3Q9Y2U8 911 aa16.77■□□□□ 0.28
TMEM254-213ENST00000613758 ZNF804BA4D1E1 1349 aa16.77■□□□□ 0.28
TMEM254-213ENST00000613758 A0A0G2JLW4 131 aa16.77■□□□□ 0.27
TMEM254-213ENST00000613758 CCDC102BQ68D86 513 aa16.77■□□□□ 0.27
TMEM254-213ENST00000613758 DPEP1P16444 411 aa16.76■□□□□ 0.27
TMEM254-213ENST00000613758 TGFB2P61812 414 aa16.76■□□□□ 0.27
TMEM254-213ENST00000613758 PRPF40BQ6NWY9 871 aaKnown RBP16.76■□□□□ 0.27
TMEM254-213ENST00000613758 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.76■□□□□ 0.27
TMEM254-213ENST00000613758 PHKA1P46020 1223 aa16.75■□□□□ 0.27
TMEM254-213ENST00000613758 CNTROBQ8N137 903 aa16.75■□□□□ 0.27
TMEM254-213ENST00000613758 HAUS7Q99871 368 aa16.75■□□□□ 0.27
TMEM254-213ENST00000613758 TMX4Q9H1E5 349 aaPredicted RBP16.75■□□□□ 0.27
TMEM254-213ENST00000613758 PODXL2Q9NZ53 605 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms