RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 MPNDQ8N594 471 aa9.73□□□□□ -0.85
PTCHD3P1-201ENST00000612350 COL25A1Q9BXS0 654 aaPredicted RBP9.73□□□□□ -0.85
PTCHD3P1-201ENST00000612350 GGA3Q9NZ52 723 aa9.73□□□□□ -0.85
PTCHD3P1-201ENST00000612350 NUP98P52948 1817 aa9.72□□□□□ -0.85
PTCHD3P1-201ENST00000612350 RPS12P25398 132 aaKnown RBP9.72□□□□□ -0.85
PTCHD3P1-201ENST00000612350 KIF4BQ2VIQ3 1234 aa9.72□□□□□ -0.85
PTCHD3P1-201ENST00000612350 TMX4Q9H1E5 349 aaPredicted RBP9.72□□□□□ -0.85
PTCHD3P1-201ENST00000612350 IBTKQ9P2D0 1353 aaPredicted RBP9.72□□□□□ -0.85
PTCHD3P1-201ENST00000612350 ERVV-1B6SEH8 477 aa9.71□□□□□ -0.86
PTCHD3P1-201ENST00000612350 BBOX1O75936 387 aa9.71□□□□□ -0.86
PTCHD3P1-201ENST00000612350 SNRPA1P09661 255 aaKnown RBP9.71□□□□□ -0.86
PTCHD3P1-201ENST00000612350 TIE1P35590 1138 aa9.71□□□□□ -0.86
PTCHD3P1-201ENST00000612350 ZNF333Q96JL9 665 aa9.71□□□□□ -0.86
PTCHD3P1-201ENST00000612350 TMEM106CQ9BVX2 250 aa9.71□□□□□ -0.86
PTCHD3P1-201ENST00000612350 KCNQ5Q9NR82 932 aa9.71□□□□□ -0.86
PTCHD3P1-201ENST00000612350 ABCC4O15439 1325 aa9.71□□□□□ -0.86
PTCHD3P1-201ENST00000612350 UBN2Q6ZU65 1347 aa9.71□□□□□ -0.86
PTCHD3P1-201ENST00000612350 CEMIPQ8WUJ3 1361 aa9.71□□□□□ -0.86
PTCHD3P1-201ENST00000612350 DUOX1Q9NRD9 1551 aa9.71□□□□□ -0.86
PTCHD3P1-201ENST00000612350 BTBD11A6QL63 1104 aa9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 GNAT3A8MTJ3 354 aa9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 SOX1O00570 391 aaPredicted RBP9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 NTSR2O95665 410 aa9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 ATN1P54259 1190 aaPredicted RBP9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 CAP1Q01518 475 aa9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 SREBF2Q12772 1141 aa9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 MKRN3Q13064 507 aaKnown RBP9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 SLC10A5Q5PT55 438 aa9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 ANGEL2Q5VTE6 544 aaKnown RBP9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 MORC1Q86VD1 984 aa9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 FAM212AQ96EL1 285 aa9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 RTL9Q8NET4 1388 aa9.7□□□□□ -0.86
PTCHD3P1-201ENST00000612350 GPTP24298 496 aa9.69□□□□□ -0.86
PTCHD3P1-201ENST00000612350 SCARF1Q14162 830 aa9.69□□□□□ -0.86
PTCHD3P1-201ENST00000612350 ZNF34Q8IZ26 560 aa9.69□□□□□ -0.86
PTCHD3P1-201ENST00000612350 NLRP3Q96P20 1036 aa9.69□□□□□ -0.86
PTCHD3P1-201ENST00000612350 DBNDD1Q9H9R9 158 aa9.69□□□□□ -0.86
PTCHD3P1-201ENST00000612350 BMP2KQ9NSY1 1161 aaPredicted RBP9.69□□□□□ -0.86
PTCHD3P1-201ENST00000612350 ZNF609O15014 1411 aa9.68□□□□□ -0.86
PTCHD3P1-201ENST00000612350 MAP3K15Q6ZN16 1313 aa9.68□□□□□ -0.86
PTCHD3P1-201ENST00000612350 ALDH1A1P00352 501 aa9.68□□□□□ -0.86
PTCHD3P1-201ENST00000612350 ZNF280AP59817 542 aaPredicted RBP9.68□□□□□ -0.86
PTCHD3P1-201ENST00000612350 ERO1AQ96HE7 468 aa9.68□□□□□ -0.86
PTCHD3P1-201ENST00000612350 LRCH3Q96II8 777 aa9.68□□□□□ -0.86
PTCHD3P1-201ENST00000612350 KDM3BQ7LBC6 1761 aa9.68□□□□□ -0.86
PTCHD3P1-201ENST00000612350 HTTP42858 3142 aa9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 SCN9AQ15858 1988 aa9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 WTIPA6NIX2 430 aaPredicted RBP9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 VIL1P09327 827 aaKnown RBP9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 PTPN12Q05209 780 aaKnown RBP9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 WASHC4Q2M389 1173 aa9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 PRAMEF18Q5VWM3 479 aa9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 TTLL7Q6ZT98 887 aa9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 IFNL1Q8IU54 200 aa9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 CD99L2Q8TCZ2 262 aa9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 PANK3Q9H999 370 aa9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 EFCC1Q9HA90 598 aa9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 SCAF8Q9UPN6 1271 aaKnown RBP9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 COL6A3P12111 3177 aa9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 TAF1P21675 1872 aa9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 A0A0C4DFX4 3053 aa9.67□□□□□ -0.86
PTCHD3P1-201ENST00000612350 SPRYD7Q5W111 196 aa9.66□□□□□ -0.86
PTCHD3P1-201ENST00000612350 MAMSTRQ6ZN01 415 aa9.66□□□□□ -0.86
PTCHD3P1-201ENST00000612350 NGEFQ8N5V2 710 aa9.66□□□□□ -0.86
PTCHD3P1-201ENST00000612350 GAS2L2Q8NHY3 880 aa9.66□□□□□ -0.86
PTCHD3P1-201ENST00000612350 DPF3Q92784 378 aa9.66□□□□□ -0.86
PTCHD3P1-201ENST00000612350 TRPC6Q9Y210 931 aa9.66□□□□□ -0.86
PTCHD3P1-201ENST00000612350 PCDHB13Q9Y5F0 798 aa9.66□□□□□ -0.86
PTCHD3P1-201ENST00000612350 LAMB2P55268 1798 aa9.65□□□□□ -0.86
PTCHD3P1-201ENST00000612350 ANKRD36CQ5JPF3 1778 aa9.65□□□□□ -0.86
PTCHD3P1-201ENST00000612350 A0A1W2PPC1 479 aa9.65□□□□□ -0.86
PTCHD3P1-201ENST00000612350 IGF2BP3O00425 579 aaKnown RBP eCLIP9.65□□□□□ -0.86
PTCHD3P1-201ENST00000612350 RIMBP2O15034 1052 aa9.65□□□□□ -0.86
PTCHD3P1-201ENST00000612350 ECE2O60344 883 aa9.65□□□□□ -0.86
PTCHD3P1-201ENST00000612350 INHBEP58166 350 aa9.65□□□□□ -0.86
PTCHD3P1-201ENST00000612350 DOK7Q18PE1 504 aa9.65□□□□□ -0.86
PTCHD3P1-201ENST00000612350 SLC4A8Q2Y0W8 1093 aa9.65□□□□□ -0.86
PTCHD3P1-201ENST00000612350 LDLRAD1Q5T700 205 aa9.65□□□□□ -0.86
PTCHD3P1-201ENST00000612350 POLLQ9UGP5 575 aa9.65□□□□□ -0.86
PTCHD3P1-201ENST00000612350 STXBP5LQ9Y2K9 1186 aa9.65□□□□□ -0.86
PTCHD3P1-201ENST00000612350 LRRC37AA6NMS7 1700 aa9.65□□□□□ -0.87
PTCHD3P1-201ENST00000612350 BRCA2P51587 3418 aa9.65□□□□□ -0.87
PTCHD3P1-201ENST00000612350 MANSC4A6NHS7 340 aaPredicted RBP9.64□□□□□ -0.87
PTCHD3P1-201ENST00000612350 TCIRG1Q13488 830 aa9.64□□□□□ -0.87
PTCHD3P1-201ENST00000612350 GRAPQ13588 217 aa9.64□□□□□ -0.87
PTCHD3P1-201ENST00000612350 TTLL12Q14166 644 aaPredicted RBP9.64□□□□□ -0.87
PTCHD3P1-201ENST00000612350 PPP1R42Q7Z4L9 355 aa9.64□□□□□ -0.87
PTCHD3P1-201ENST00000612350 NBPF11Q86T75 865 aa9.64□□□□□ -0.87
PTCHD3P1-201ENST00000612350 GRAPLQ8TC17 118 aaPredicted RBP9.64□□□□□ -0.87
PTCHD3P1-201ENST00000612350 NECTIN2Q92692 538 aa9.64□□□□□ -0.87
PTCHD3P1-201ENST00000612350 PTCH2Q9Y6C5 1203 aa9.64□□□□□ -0.87
PTCHD3P1-201ENST00000612350 LAMB1P07942 1786 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 TTLL13PA6NNM8 815 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 DIAPH1O60610 1272 aaKnown RBP9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 SP3Q02447 781 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 CRHR2Q13324 411 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 PARP10Q53GL7 1025 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 GPR153Q6NV75 609 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 GIGYF2Q6Y7W6 1299 aaKnown RBP9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 TMC4Q7Z404 712 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms