RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 MORC4Q8TE76 937 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 CEP83Q9Y592 693 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 ABCC10Q5T3U5 1492 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 GSTTP1A0A1W2PQM5 241 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 PPP2R5CQ13362 524 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 KLHL40Q2TBA0 621 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 RNF41Q9H4P4 317 aaPredicted RBP10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 RBM27Q9P2N5 1060 aaKnown RBP10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 MAP2K1Q02750 393 aaPredicted RBP10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 USP16Q9Y5T5 823 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 CCDC157Q569K6 752 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 KSR2Q6VAB6 950 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 PDCL2Q8N4E4 241 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 NEK1Q96PY6 1258 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 HMG20BQ9P0W2 317 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 FLT4P35916 1363 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 BIN1O00499 593 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 STX6O43752 255 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 CAVIN2O95810 425 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 ATP6V1AP38606 617 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 LEKR1Q6ZMV7 388 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 BRF1Q92994 677 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 SEC63Q9UGP8 760 aaKnown RBP10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 ABCC1P33527 1531 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 TPD52P55327 224 aaPredicted RBP10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 HOOK3Q86VS8 718 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 UTP14AQ9BVJ6 771 aaKnown RBP10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 DMRT2Q9Y5R5 561 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 EIF4G3O43432 1585 aaKnown RBP10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 ARHGAP29Q52LW3 1261 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 VAT1LQ9HCJ6 419 aa10.83□□□□□ -0.68
SRGAP2B-204ENST00000612199 BAG4O95429 457 aaKnown RBP10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 TMEM67Q5HYA8 995 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 ISM2Q6H9L7 571 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 CDC5LQ99459 802 aaKnown RBP10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 CACYBPQ9HB71 228 aaKnown RBP10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 LMOD1P29536 600 aaPredicted RBP10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 CCDC96Q2M329 555 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 G2E3Q7L622 706 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 TMX3Q96JJ7 454 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 RFC4P35249 363 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 SNX16P57768 344 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 ATP8B2P98198 1209 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 HELBQ8NG08 1087 aaPredicted RBP10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 UBXN4Q92575 508 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 C8orf37Q96NL8 207 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 SYNDIG1Q9H7V2 258 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 DISP1Q96F81 1524 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 NBPF6Q5VWK0 638 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 IQCEQ6IPM2 695 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 NBPF5PQ86XG9 351 aaPredicted RBP10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 NBPF4Q96M43 638 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 USP25Q9UHP3 1055 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 DNA2P51530 1060 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 ORAI2Q96SN7 254 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 NACA2Q9H009 215 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 MMRN2Q9H8L6 949 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 YTHDC2Q9H6S0 1430 aaKnown RBP10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 TEX14Q8IWB6 1497 aa10.82□□□□□ -0.68
SRGAP2B-204ENST00000612199 ZSCAN12O43309 604 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 HOXC9P31274 260 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 ALS2CR12Q96Q35 445 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 C19orf44Q9H6X5 657 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 CFAP43Q8NDM7 1665 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 NEMFO60524 1076 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 SYNCQ9H7C4 482 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 ORC3Q9UBD5 711 aaPredicted RBP10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 ALDH1L1O75891 902 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 SEC24BO95487 1268 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 MCM5P33992 734 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 EIF5P55010 431 aaKnown RBP10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 C8orf34Q49A92 452 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 CEP85Q6P2H3 762 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 GOLGA6L7A0A1B0GV03 622 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 FSIP1Q8NA03 581 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 BICD1Q96G01 975 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 UBAP1LF5GYI3 381 aa10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 RRP9O43818 475 aaKnown RBP10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 SSRP1Q08945 709 aaKnown RBP10.81□□□□□ -0.68
SRGAP2B-204ENST00000612199 EIF4E1BA6NMX2 242 aaKnown RBP10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 NLRP5P59047 1200 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 PTPN14Q15678 1187 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 ESYT1Q9BSJ8 1104 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 RBM8AQ9Y5S9 174 aaKnown RBP10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 TSPY2A6NKD2 308 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 SPTY2D1Q68D10 685 aaPredicted RBP10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 IARSP41252 1262 aaKnown RBP10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 TTF1Q15361 905 aaPredicted RBP10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 ZBTB40Q9NUA8 1239 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 UHRF1BP1Q6BDS2 1440 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 PIK3C2GO75747 1445 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 MFSD6Q6ZSS7 791 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 CHST3Q7LGC8 479 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 CATIPQ7Z7H3 387 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 DDX17Q92841 729 aaKnown RBP10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 DACT3Q96B18 629 aaPredicted RBP10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 NIP7Q9Y221 180 aaKnown RBP eCLIP10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 KIF5CO60282 957 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 USP8P40818 1118 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 DDB1Q16531 1140 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms