RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 BTBD11A6QL63 1104 aa12.89□□□□□ -0.35
CDH4-202ENST00000611855 TRIM66O15016 1216 aa12.89□□□□□ -0.35
CDH4-202ENST00000611855 PNMA6AP0CW24 399 aaPredicted RBP12.89□□□□□ -0.35
CDH4-202ENST00000611855 ST5P78524 1137 aa12.89□□□□□ -0.35
CDH4-202ENST00000611855 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.89□□□□□ -0.35
CDH4-202ENST00000611855 FAM177A1Q8N128 213 aaPredicted RBP12.89□□□□□ -0.35
CDH4-202ENST00000611855 CCDC34Q96HJ3 373 aa12.89□□□□□ -0.35
CDH4-202ENST00000611855 ME1P48163 572 aa12.89□□□□□ -0.35
CDH4-202ENST00000611855 GYS2P54840 703 aa12.89□□□□□ -0.35
CDH4-202ENST00000611855 CCZ1BP86790 482 aa12.89□□□□□ -0.35
CDH4-202ENST00000611855 CCZ1P86791 482 aaPredicted RBP12.89□□□□□ -0.35
CDH4-202ENST00000611855 CCAR2Q8N163 923 aaKnown RBP12.89□□□□□ -0.35
CDH4-202ENST00000611855 EPC1Q9H2F5 836 aa12.89□□□□□ -0.35
CDH4-202ENST00000611855 DNAJC5Q9H3Z4 198 aa12.89□□□□□ -0.35
CDH4-202ENST00000611855 TMCO3Q6UWJ1 677 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 RBM43Q6ZSC3 357 aaKnown RBP12.88□□□□□ -0.35
CDH4-202ENST00000611855 KCNB2Q92953 911 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
CDH4-202ENST00000611855 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
CDH4-202ENST00000611855 USP28Q96RU2 1077 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 SMC2O95347 1197 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 LTKP29376 864 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 PIP4K2AP48426 406 aaPredicted RBP12.88□□□□□ -0.35
CDH4-202ENST00000611855 OTUD7BQ6GQQ9 843 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.88□□□□□ -0.35
CDH4-202ENST00000611855 FHOD1Q9Y613 1164 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
CDH4-202ENST00000611855 A0A0G2JLW4 131 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 PLA2G4AP47712 749 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 SCRN1Q12765 414 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 GNL2Q13823 731 aaKnown RBP12.88□□□□□ -0.35
CDH4-202ENST00000611855 ANKRD1Q15327 319 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 STX1AQ16623 288 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 CCDC73Q6ZRK6 1079 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 NYAP1Q6ZVC0 841 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 FSIP1Q8NA03 581 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 UBXN4Q92575 508 aa12.88□□□□□ -0.35
CDH4-202ENST00000611855 NPHP4O75161 1426 aaPredicted RBP12.87□□□□□ -0.35
CDH4-202ENST00000611855 KINO60870 393 aaKnown RBP12.87□□□□□ -0.35
CDH4-202ENST00000611855 APOBRQ0VD83 1088 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 DHX40Q8IX18 779 aaKnown RBP12.87□□□□□ -0.35
CDH4-202ENST00000611855 MNS1Q8NEH6 495 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 A0A1B0GVL5 298 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 CCDC191Q8NCU4 936 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 KAZALD1Q96I82 304 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 KIF13AQ9H1H9 1805 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 ERBB3P21860 1342 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 TAF5LO75529 589 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 NBPF6Q5VWK0 638 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 DDX46Q7L014 1031 aaKnown RBP12.87□□□□□ -0.35
CDH4-202ENST00000611855 TMC6Q7Z403 805 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 SMARCE1Q969G3 411 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 NBPF4Q96M43 638 aa12.87□□□□□ -0.35
CDH4-202ENST00000611855 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
CDH4-202ENST00000611855 DNAI1Q9UI46 699 aa12.86□□□□□ -0.35
CDH4-202ENST00000611855 COL15A1P39059 1388 aa12.86□□□□□ -0.35
CDH4-202ENST00000611855 URI1O94763 535 aaPredicted RBP12.86□□□□□ -0.35
CDH4-202ENST00000611855 MYL6BP14649 208 aa12.86□□□□□ -0.35
CDH4-202ENST00000611855 GOLGA8FQ08AF8 430 aa12.86□□□□□ -0.35
CDH4-202ENST00000611855 GOLGA8DPQ0D2H9 430 aa12.86□□□□□ -0.35
CDH4-202ENST00000611855 TSPYL1Q9H0U9 437 aa12.86□□□□□ -0.35
CDH4-202ENST00000611855 RASSF4Q9H2L5 321 aa12.86□□□□□ -0.35
CDH4-202ENST00000611855 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.86□□□□□ -0.35
CDH4-202ENST00000611855 ERC1Q8IUD2 1116 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 ARGLU1Q9NWB6 273 aaPredicted RBP12.85□□□□□ -0.35
CDH4-202ENST00000611855 LCMT1Q9UIC8 334 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 CFAP45Q9UL16 551 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 AMOTL2Q9Y2J4 779 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 CYP21A2P08686 494 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 TPM4P67936 248 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 SLC20A2Q08357 652 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 IFNKQ9P0W0 207 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 SPATA31D1Q6ZQQ2 1576 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 DPCR1Q3MIW9 517 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 EPHA10Q5JZY3 1008 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 MRFAP1L1Q96HT8 127 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 TOMM22Q9NS69 142 aa12.85□□□□□ -0.35
CDH4-202ENST00000611855 GRM8O00222 908 aa12.84□□□□□ -0.35
CDH4-202ENST00000611855 ADD1P35611 737 aaKnown RBP12.84□□□□□ -0.35
CDH4-202ENST00000611855 LMAN1P49257 510 aa12.84□□□□□ -0.35
CDH4-202ENST00000611855 STOX1Q6ZVD7 989 aa12.84□□□□□ -0.35
CDH4-202ENST00000611855 XPO4Q9C0E2 1151 aaKnown RBP12.84□□□□□ -0.35
CDH4-202ENST00000611855 GJB4Q9NTQ9 266 aa12.84□□□□□ -0.35
CDH4-202ENST00000611855 FAM53CQ9NYF3 392 aa12.84□□□□□ -0.35
CDH4-202ENST00000611855 DBF4Q9UBU7 674 aaPredicted RBP12.84□□□□□ -0.35
CDH4-202ENST00000611855 PTPDC1A2A3K4 754 aa12.84□□□□□ -0.35
CDH4-202ENST00000611855 NEMFO60524 1076 aa12.84□□□□□ -0.35
CDH4-202ENST00000611855 POLR3DP05423 398 aaPredicted RBP12.84□□□□□ -0.35
CDH4-202ENST00000611855 H2AFXP16104 143 aaPredicted RBP12.84□□□□□ -0.35
CDH4-202ENST00000611855 OAS2P29728 719 aaKnown RBP12.84□□□□□ -0.35
CDH4-202ENST00000611855 HDGFP51858 240 aaKnown RBP12.84□□□□□ -0.35
CDH4-202ENST00000611855 ZSCAN26Q16670 478 aa12.84□□□□□ -0.35
CDH4-202ENST00000611855 E4F1Q66K89 784 aaPredicted RBP12.84□□□□□ -0.35
CDH4-202ENST00000611855 CEP57L1Q8IYX8 460 aa12.84□□□□□ -0.35
CDH4-202ENST00000611855 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDH4-202ENST00000611855 HIP1O00291 1037 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms