RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 ERCC4Q92889 916 aaPredicted RBP16.58■□□□□ 0.24
LINC02538-201ENST00000609107 TTLL5Q6EMB2 1281 aa16.57■□□□□ 0.24
LINC02538-201ENST00000609107 ZSCAN12O43309 604 aa16.57■□□□□ 0.24
LINC02538-201ENST00000609107 BICDL1Q6ZP65 573 aa16.57■□□□□ 0.24
LINC02538-201ENST00000609107 MFSD6Q6ZSS7 791 aa16.57■□□□□ 0.24
LINC02538-201ENST00000609107 CDC5LQ99459 802 aaKnown RBP16.57■□□□□ 0.24
LINC02538-201ENST00000609107 KDRP35968 1356 aa16.57■□□□□ 0.24
LINC02538-201ENST00000609107 FAM227BQ96M60 508 aa16.57■□□□□ 0.24
LINC02538-201ENST00000609107 TOP1P11387 765 aaKnown RBP16.56■□□□□ 0.24
LINC02538-201ENST00000609107 ATL3Q6DD88 541 aa16.56■□□□□ 0.24
LINC02538-201ENST00000609107 PRC1O43663 620 aa16.56■□□□□ 0.24
LINC02538-201ENST00000609107 EYA2O00167 538 aa16.56■□□□□ 0.24
LINC02538-201ENST00000609107 NAP1L1P55209 391 aaKnown RBP16.56■□□□□ 0.24
LINC02538-201ENST00000609107 C16orf45Q96MC5 204 aaPredicted RBP16.56■□□□□ 0.24
LINC02538-201ENST00000609107 PTPDC1A2A3K4 754 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 ZBTB43O43298 467 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 PPFIA3O75145 1194 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 CCDC82Q8N4S0 544 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 CAGE1Q8TC20 777 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 DBNDD2Q9BQY9 259 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 PALD1Q9ULE6 856 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 BIN1O00499 593 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 RANBP6O60518 1105 aaKnown RBP16.55■□□□□ 0.24
LINC02538-201ENST00000609107 APOBRQ0VD83 1088 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 CCDC102BQ68D86 513 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 CATIPQ7Z7H3 387 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
LINC02538-201ENST00000609107 KRT23Q9C075 422 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 CNNM2Q9H8M5 875 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 ZNF287Q9HBT7 754 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 KCNQ3O43525 872 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 SLC9C2Q5TAH2 1124 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 RAB11FIP4Q86YS3 637 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 FAM177A1Q8N128 213 aaPredicted RBP16.55■□□□□ 0.24
LINC02538-201ENST00000609107 ALG1Q9BT22 464 aa16.55■□□□□ 0.24
LINC02538-201ENST00000609107 KLHDC4Q8TBB5 520 aa16.54■□□□□ 0.24
LINC02538-201ENST00000609107 EPS15P42566 896 aa16.54■□□□□ 0.24
LINC02538-201ENST00000609107 CCDC191Q8NCU4 936 aa16.54■□□□□ 0.24
LINC02538-201ENST00000609107 DNAJC25Q9H1X3 360 aa16.54■□□□□ 0.24
LINC02538-201ENST00000609107 FSD2A1L4K1 749 aa16.54■□□□□ 0.24
LINC02538-201ENST00000609107 CCDC186Q7Z3E2 898 aa16.54■□□□□ 0.24
LINC02538-201ENST00000609107 TMTC2Q8N394 836 aa16.54■□□□□ 0.24
LINC02538-201ENST00000609107 UBXN4Q92575 508 aa16.54■□□□□ 0.24
LINC02538-201ENST00000609107 LLPHQ9BRT6 129 aaKnown RBP16.54■□□□□ 0.24
LINC02538-201ENST00000609107 SLC26A6Q9BXS9 759 aa16.54■□□□□ 0.24
LINC02538-201ENST00000609107 CCDC152Q4G0S7 254 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 TTC12Q9H892 705 aaPredicted RBP16.53■□□□□ 0.24
LINC02538-201ENST00000609107 RGS12O14924 1447 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 CD2BP2O95400 341 aaKnown RBP16.53■□□□□ 0.24
LINC02538-201ENST00000609107 SYKP43405 635 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 TMC6Q7Z403 805 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 CCDC150Q8NCX0 1101 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 ZNF496Q96IT1 587 aaPredicted RBP16.53■□□□□ 0.24
LINC02538-201ENST00000609107 CAMSAP1Q5T5Y3 1602 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 KANK3Q6NY19 840 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 CCDC144CPQ8IYA2 1237 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 KBTBD3Q8NAB2 608 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 NEURL1BA8MQ27 555 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 TMEM63CQ9P1W3 806 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 TCEAL9Q9UHQ7 104 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 NRXN1Q9ULB1 1477 aa16.53■□□□□ 0.24
LINC02538-201ENST00000609107 LRRC7Q96NW7 1537 aa16.52■□□□□ 0.24
LINC02538-201ENST00000609107 ATP5JP18859 108 aa16.52■□□□□ 0.24
LINC02538-201ENST00000609107 AK7Q96M32 723 aa16.52■□□□□ 0.24
LINC02538-201ENST00000609107 PAXBP1Q9Y5B6 917 aa16.52■□□□□ 0.24
LINC02538-201ENST00000609107 WTAPQ15007 396 aa16.52■□□□□ 0.23
LINC02538-201ENST00000609107 USP5P45974 858 aa16.52■□□□□ 0.23
LINC02538-201ENST00000609107 A0A1B0GUL7 405 aa16.51■□□□□ 0.23
LINC02538-201ENST00000609107 SPTLC2O15270 562 aa16.51■□□□□ 0.23
LINC02538-201ENST00000609107 ZPR1O75312 459 aa16.51■□□□□ 0.23
LINC02538-201ENST00000609107 BRAPQ7Z569 592 aa16.51■□□□□ 0.23
LINC02538-201ENST00000609107 RUFY1Q96T51 708 aa16.51■□□□□ 0.23
LINC02538-201ENST00000609107 TIMM10P62072 90 aa16.51■□□□□ 0.23
LINC02538-201ENST00000609107 DZIP1Q86YF9 867 aaKnown RBP16.51■□□□□ 0.23
LINC02538-201ENST00000609107 PIBF1Q8WXW3 757 aa16.51■□□□□ 0.23
LINC02538-201ENST00000609107 IKQ13123 557 aaPredicted RBP16.51■□□□□ 0.23
LINC02538-201ENST00000609107 MKNK2Q9HBH9 465 aa16.51■□□□□ 0.23
LINC02538-201ENST00000609107 CTDP1Q9Y5B0 961 aaPredicted RBP16.51■□□□□ 0.23
LINC02538-201ENST00000609107 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
LINC02538-201ENST00000609107 TRMT1Q9NXH9 659 aaKnown RBP16.5■□□□□ 0.23
LINC02538-201ENST00000609107 CCDC66A2RUB6 948 aa16.5■□□□□ 0.23
LINC02538-201ENST00000609107 GADD45BO75293 160 aaPredicted RBP16.5■□□□□ 0.23
LINC02538-201ENST00000609107 PKP1Q13835 747 aa16.5■□□□□ 0.23
LINC02538-201ENST00000609107 CCDC129Q6ZRS4 1044 aa16.5■□□□□ 0.23
LINC02538-201ENST00000609107 ERLIN1O75477 346 aa16.5■□□□□ 0.23
LINC02538-201ENST00000609107 ARHGAP29Q52LW3 1261 aa16.5■□□□□ 0.23
LINC02538-201ENST00000609107 KLHL10Q6JEL2 608 aa16.5■□□□□ 0.23
LINC02538-201ENST00000609107 EAF2Q96CJ1 260 aaPredicted RBP16.5■□□□□ 0.23
LINC02538-201ENST00000609107 CGNQ9P2M7 1197 aaKnown RBP16.5■□□□□ 0.23
LINC02538-201ENST00000609107 IQSEC2Q5JU85 1478 aa16.5■□□□□ 0.23
LINC02538-201ENST00000609107 CHST3Q7LGC8 479 aa16.49■□□□□ 0.23
LINC02538-201ENST00000609107 PPP1R9BQ96SB3 815 aa16.49■□□□□ 0.23
LINC02538-201ENST00000609107 TXLNBQ8N3L3 684 aa16.49■□□□□ 0.23
LINC02538-201ENST00000609107 PYM1Q9BRP8 204 aaKnown RBP16.49■□□□□ 0.23
LINC02538-201ENST00000609107 ZSWIM6Q9HCJ5 1215 aa16.49■□□□□ 0.23
LINC02538-201ENST00000609107 NEXMIFQ5QGS0 1516 aa16.49■□□□□ 0.23
LINC02538-201ENST00000609107 ARHGEF40Q8TER5 1519 aa16.49■□□□□ 0.23
LINC02538-201ENST00000609107 IRS4O14654 1257 aaPredicted RBP16.49■□□□□ 0.23
LINC02538-201ENST00000609107 KRT18P05783 430 aaKnown RBP16.49■□□□□ 0.23
LINC02538-201ENST00000609107 NLRP5P59047 1200 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms