RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 GORABQ5T7V8 394 aa26.18■■□□□ 1.78
USP6NL-204ENST00000606752 RUFY2Q8WXA3 655 aa26.18■■□□□ 1.78
USP6NL-204ENST00000606752 DAXXQ9UER7 740 aaPredicted RBP26.18■■□□□ 1.78
USP6NL-204ENST00000606752 LRP5O75197 1615 aa26.18■■□□□ 1.78
USP6NL-204ENST00000606752 SGSM2O43147 1006 aa26.18■■□□□ 1.78
USP6NL-204ENST00000606752 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.18■■□□□ 1.78
USP6NL-204ENST00000606752 AKT1S1Q96B36 256 aa26.18■■□□□ 1.78
USP6NL-204ENST00000606752 TFCP2L1Q9NZI6 479 aa26.18■■□□□ 1.78
USP6NL-204ENST00000606752 AK9Q5TCS8 1911 aa26.18■■□□□ 1.78
USP6NL-204ENST00000606752 KIF2CQ99661 725 aa26.17■■□□□ 1.78
USP6NL-204ENST00000606752 NPHP1O15259 732 aa26.16■■□□□ 1.78
USP6NL-204ENST00000606752 EPB41L2O43491 1005 aaKnown RBP26.16■■□□□ 1.78
USP6NL-204ENST00000606752 ADORA1P30542 326 aa26.16■■□□□ 1.78
USP6NL-204ENST00000606752 BECN1Q14457 450 aa26.16■■□□□ 1.78
USP6NL-204ENST00000606752 CWC27Q6UX04 472 aaKnown RBP26.16■■□□□ 1.78
USP6NL-204ENST00000606752 DNAJC2Q99543 621 aaKnown RBP26.16■■□□□ 1.78
USP6NL-204ENST00000606752 FSD1Q9BTV5 496 aa26.16■■□□□ 1.78
USP6NL-204ENST00000606752 ZNF827Q17R98 1081 aa26.16■■□□□ 1.78
USP6NL-204ENST00000606752 ANKRD18AQ8IVF6 992 aa26.16■■□□□ 1.78
USP6NL-204ENST00000606752 IL25Q9H293 177 aa26.16■■□□□ 1.78
USP6NL-204ENST00000606752 ANO2Q9NQ90 1003 aa26.16■■□□□ 1.78
USP6NL-204ENST00000606752 IFIT1P09914 478 aaKnown RBP26.15■■□□□ 1.78
USP6NL-204ENST00000606752 PUM3Q15397 648 aaKnown RBP26.15■■□□□ 1.78
USP6NL-204ENST00000606752 EDC3Q96F86 508 aaKnown RBP26.15■■□□□ 1.78
USP6NL-204ENST00000606752 TM4SF1P30408 202 aa26.14■■□□□ 1.78
USP6NL-204ENST00000606752 LPIN2Q92539 896 aa26.14■■□□□ 1.78
USP6NL-204ENST00000606752 FGFR2P21802 821 aa26.14■■□□□ 1.77
USP6NL-204ENST00000606752 TTC39AQ5SRH9 613 aa26.14■■□□□ 1.77
USP6NL-204ENST00000606752 CNBD1Q8NA66 436 aa26.14■■□□□ 1.77
USP6NL-204ENST00000606752 HELBQ8NG08 1087 aaPredicted RBP26.14■■□□□ 1.77
USP6NL-204ENST00000606752 CCDC24Q8N4L8 307 aa26.13■■□□□ 1.77
USP6NL-204ENST00000606752 BSDC1Q9NW68 430 aaPredicted RBP26.13■■□□□ 1.77
USP6NL-204ENST00000606752 NDUFB9Q9Y6M9 179 aa26.13■■□□□ 1.77
USP6NL-204ENST00000606752 TICAM2Q86XR7 235 aa26.12■■□□□ 1.77
USP6NL-204ENST00000606752 FLAD1Q8NFF5 587 aa26.12■■□□□ 1.77
USP6NL-204ENST00000606752 PAG1Q9NWQ8 432 aa26.12■■□□□ 1.77
USP6NL-204ENST00000606752 SLC4A3P48751 1232 aa26.11■■□□□ 1.77
USP6NL-204ENST00000606752 KIAA1211Q6ZU35 1233 aa26.11■■□□□ 1.77
USP6NL-204ENST00000606752 KBTBD3Q8NAB2 608 aa26.11■■□□□ 1.77
USP6NL-204ENST00000606752 ZNF512BQ96KM6 892 aaPredicted RBP26.11■■□□□ 1.77
USP6NL-204ENST00000606752 RFX7Q2KHR2 1363 aa26.11■■□□□ 1.77
USP6NL-204ENST00000606752 SERPINB2P05120 415 aa26.1■■□□□ 1.77
USP6NL-204ENST00000606752 MCCP23508 829 aa26.1■■□□□ 1.77
USP6NL-204ENST00000606752 CHRNDQ07001 517 aa26.1■■□□□ 1.77
USP6NL-204ENST00000606752 GOLIM4O00461 696 aa26.09■■□□□ 1.77
USP6NL-204ENST00000606752 TAF5LO75529 589 aa26.09■■□□□ 1.77
USP6NL-204ENST00000606752 SLC5A1P13866 664 aa26.09■■□□□ 1.77
USP6NL-204ENST00000606752 NMIQ13287 307 aaPredicted RBP26.09■■□□□ 1.77
USP6NL-204ENST00000606752 PRR5LQ6MZQ0 368 aa26.09■■□□□ 1.77
USP6NL-204ENST00000606752 DDX46Q7L014 1031 aaKnown RBP26.09■■□□□ 1.77
USP6NL-204ENST00000606752 COL23A1Q86Y22 540 aaPredicted RBP26.09■■□□□ 1.77
USP6NL-204ENST00000606752 TNS1Q9HBL0 1735 aaKnown RBP26.09■■□□□ 1.77
USP6NL-204ENST00000606752 RAD50Q92878 1312 aa26.09■■□□□ 1.77
USP6NL-204ENST00000606752 RPS8P62241 208 aaKnown RBP26.09■■□□□ 1.77
USP6NL-204ENST00000606752 CELF1Q92879 486 aaKnown RBP26.09■■□□□ 1.77
USP6NL-204ENST00000606752 FAM227BQ96M60 508 aa26.09■■□□□ 1.77
USP6NL-204ENST00000606752 TBC1D2Q9BYX2 928 aa26.09■■□□□ 1.77
USP6NL-204ENST00000606752 LSG1Q9H089 658 aaKnown RBP26.08■■□□□ 1.77
USP6NL-204ENST00000606752 SNRKQ9NRH2 765 aa26.08■■□□□ 1.77
USP6NL-204ENST00000606752 NLGN1Q8N2Q7 840 aa26.07■■□□□ 1.76
USP6NL-204ENST00000606752 ST5P78524 1137 aa26.07■■□□□ 1.76
USP6NL-204ENST00000606752 FKBP4Q02790 459 aaKnown RBP eCLIP26.07■■□□□ 1.76
USP6NL-204ENST00000606752 RABEP1Q15276 862 aa26.07■■□□□ 1.76
USP6NL-204ENST00000606752 SNX21Q969T3 373 aa26.07■■□□□ 1.76
USP6NL-204ENST00000606752 RGPD3A6NKT7 1758 aaPredicted RBP26.06■■□□□ 1.76
USP6NL-204ENST00000606752 RGPD4Q7Z3J3 1758 aa26.06■■□□□ 1.76
USP6NL-204ENST00000606752 CCDC102BQ68D86 513 aa26.06■■□□□ 1.76
USP6NL-204ENST00000606752 CAMKK2Q96RR4 588 aa26.06■■□□□ 1.76
USP6NL-204ENST00000606752 MINPP1Q9UNW1 487 aa26.06■■□□□ 1.76
USP6NL-204ENST00000606752 A0A0D9SFI3 127 aa26.05■■□□□ 1.76
USP6NL-204ENST00000606752 POLRMTO00411 1230 aaKnown RBP26.05■■□□□ 1.76
USP6NL-204ENST00000606752 UQCRFS1P1P0C7P4 283 aa26.05■■□□□ 1.76
USP6NL-204ENST00000606752 DDR1Q08345 913 aa26.05■■□□□ 1.76
USP6NL-204ENST00000606752 ANAPC15P60006 121 aa26.04■■□□□ 1.76
USP6NL-204ENST00000606752 SCARF1Q14162 830 aa26.04■■□□□ 1.76
USP6NL-204ENST00000606752 COL4A1P02462 1669 aa26.04■■□□□ 1.76
USP6NL-204ENST00000606752 SNAP23O00161 211 aa26.04■■□□□ 1.76
USP6NL-204ENST00000606752 ARID4AP29374 1257 aaPredicted RBP26.04■■□□□ 1.76
USP6NL-204ENST00000606752 EN1Q05925 392 aaPredicted RBP26.04■■□□□ 1.76
USP6NL-204ENST00000606752 ERICH6Q7L0X2 663 aa26.04■■□□□ 1.76
USP6NL-204ENST00000606752 HSPA4P34932 840 aa26.03■■□□□ 1.76
USP6NL-204ENST00000606752 PHKA1P46020 1223 aa26.03■■□□□ 1.76
USP6NL-204ENST00000606752 EZH2Q15910 746 aaKnown RBP26.03■■□□□ 1.76
USP6NL-204ENST00000606752 ANTXR1Q9H6X2 564 aa26.03■■□□□ 1.76
USP6NL-204ENST00000606752 MCAMP43121 646 aa26.02■■□□□ 1.76
USP6NL-204ENST00000606752 ZAP70P43403 619 aa26.02■■□□□ 1.76
USP6NL-204ENST00000606752 UBE4AQ14139 1066 aa26.02■■□□□ 1.76
USP6NL-204ENST00000606752 HSCBQ8IWL3 235 aa26.02■■□□□ 1.76
USP6NL-204ENST00000606752 IL17RAQ96F46 866 aa26.02■■□□□ 1.76
USP6NL-204ENST00000606752 SPEF2Q9C093 1822 aa26.02■■□□□ 1.76
USP6NL-204ENST00000606752 LRRFIP1Q32MZ4 808 aaKnown RBP26.02■■□□□ 1.76
USP6NL-204ENST00000606752 PNPLA7Q6ZV29 1317 aa26.02■■□□□ 1.76
USP6NL-204ENST00000606752 MED23Q9ULK4 1368 aa26.01■■□□□ 1.75
USP6NL-204ENST00000606752 CCDC171Q6TFL3 1326 aa26■■□□□ 1.75
USP6NL-204ENST00000606752 PTH1RQ03431 593 aa26■■□□□ 1.75
USP6NL-204ENST00000606752 CRY2Q49AN0 593 aa26■■□□□ 1.75
USP6NL-204ENST00000606752 MCMDC2Q4G0Z9 681 aa26■■□□□ 1.75
USP6NL-204ENST00000606752 CASZ1Q86V15 1759 aa26■■□□□ 1.75
USP6NL-204ENST00000606752 GRAPQ13588 217 aa26■■□□□ 1.75
USP6NL-204ENST00000606752 GRAPLQ8TC17 118 aaPredicted RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms