RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 HSP90B1P14625 803 aaKnown RBP17.89■□□□□ 0.45
LYSMD4-211ENST00000604213 NAA16Q6N069 864 aaPredicted RBP17.89■□□□□ 0.45
LYSMD4-211ENST00000604213 ANO10Q9NW15 660 aa17.89■□□□□ 0.45
LYSMD4-211ENST00000604213 SLIT1O75093 1534 aa17.89■□□□□ 0.45
LYSMD4-211ENST00000604213 A0A0U1RQG5 324 aaPredicted RBP17.88■□□□□ 0.45
LYSMD4-211ENST00000604213 LLPHQ9BRT6 129 aaKnown RBP17.88■□□□□ 0.45
LYSMD4-211ENST00000604213 SLU7O95391 586 aaKnown RBP17.88■□□□□ 0.45
LYSMD4-211ENST00000604213 AKAP4Q5JQC9 854 aa17.88■□□□□ 0.45
LYSMD4-211ENST00000604213 MPRIPQ6WCQ1 1025 aa17.88■□□□□ 0.45
LYSMD4-211ENST00000604213 CCDC73Q6ZRK6 1079 aa17.88■□□□□ 0.45
LYSMD4-211ENST00000604213 IP6K1Q92551 441 aa17.88■□□□□ 0.45
LYSMD4-211ENST00000604213 MRC1P22897 1456 aa17.88■□□□□ 0.45
LYSMD4-211ENST00000604213 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.87■□□□□ 0.45
LYSMD4-211ENST00000604213 PFKFB2O60825 505 aa17.87■□□□□ 0.45
LYSMD4-211ENST00000604213 KLHDC4Q8TBB5 520 aa17.87■□□□□ 0.45
LYSMD4-211ENST00000604213 KINO60870 393 aaKnown RBP17.87■□□□□ 0.45
LYSMD4-211ENST00000604213 FAM160A1Q05DH4 1040 aa17.87■□□□□ 0.45
LYSMD4-211ENST00000604213 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
LYSMD4-211ENST00000604213 NSUN7Q8NE18 718 aaKnown RBP17.87■□□□□ 0.45
LYSMD4-211ENST00000604213 USP28Q96RU2 1077 aa17.87■□□□□ 0.45
LYSMD4-211ENST00000604213 OSBPL5Q9H0X9 879 aaPredicted RBP17.87■□□□□ 0.45
LYSMD4-211ENST00000604213 U3KPZ7 1027 aaPredicted RBP17.87■□□□□ 0.45
LYSMD4-211ENST00000604213 HEG1Q9ULI3 1381 aa17.87■□□□□ 0.45
LYSMD4-211ENST00000604213 PRAMEF22A3QJZ6 481 aa17.86■□□□□ 0.45
LYSMD4-211ENST00000604213 KIF2AO00139 706 aaPredicted RBP17.86■□□□□ 0.45
LYSMD4-211ENST00000604213 CYP21A2P08686 494 aa17.86■□□□□ 0.45
LYSMD4-211ENST00000604213 GSDMDP57764 484 aa17.86■□□□□ 0.45
LYSMD4-211ENST00000604213 NBPF11Q86T75 865 aa17.86■□□□□ 0.45
LYSMD4-211ENST00000604213 CEP57L1Q8IYX8 460 aa17.86■□□□□ 0.45
LYSMD4-211ENST00000604213 AOPEPQ8N6M6 819 aa17.86■□□□□ 0.45
LYSMD4-211ENST00000604213 LRRC2Q9BYS8 371 aa17.86■□□□□ 0.45
LYSMD4-211ENST00000604213 CTDNEP1O95476 244 aa17.86■□□□□ 0.45
LYSMD4-211ENST00000604213 ZNF446Q9NWS9 450 aa17.86■□□□□ 0.45
LYSMD4-211ENST00000604213 ANKARQ7Z5J8 1434 aa17.85■□□□□ 0.45
LYSMD4-211ENST00000604213 LMO7Q8WWI1 1683 aa17.85■□□□□ 0.45
LYSMD4-211ENST00000604213 ATP5JP18859 108 aa17.85■□□□□ 0.45
LYSMD4-211ENST00000604213 FOSBP53539 338 aa17.85■□□□□ 0.45
LYSMD4-211ENST00000604213 CCDC129Q6ZRS4 1044 aa17.85■□□□□ 0.45
LYSMD4-211ENST00000604213 NCAPD2Q15021 1401 aa17.85■□□□□ 0.45
LYSMD4-211ENST00000604213 RNMTO43148 476 aaKnown RBP17.84■□□□□ 0.45
LYSMD4-211ENST00000604213 ATL3Q6DD88 541 aa17.84■□□□□ 0.45
LYSMD4-211ENST00000604213 FSIP1Q8NA03 581 aa17.84■□□□□ 0.45
LYSMD4-211ENST00000604213 L2HGDHQ9H9P8 463 aa17.84■□□□□ 0.45
LYSMD4-211ENST00000604213 ZNF609O15014 1411 aa17.84■□□□□ 0.45
LYSMD4-211ENST00000604213 MYH15Q9Y2K3 1946 aa17.84■□□□□ 0.45
LYSMD4-211ENST00000604213 CHGBP05060 677 aa17.84■□□□□ 0.45
LYSMD4-211ENST00000604213 STOX1Q6ZVD7 989 aa17.84■□□□□ 0.45
LYSMD4-211ENST00000604213 ZNF396Q96N95 335 aaPredicted RBP17.84■□□□□ 0.45
LYSMD4-211ENST00000604213 IMPACTQ9P2X3 320 aa17.84■□□□□ 0.45
LYSMD4-211ENST00000604213 TBX22Q9Y458 520 aa17.84■□□□□ 0.45
LYSMD4-211ENST00000604213 PTPDC1A2A3K4 754 aa17.83■□□□□ 0.45
LYSMD4-211ENST00000604213 IGKV5-2P06315 115 aa17.83■□□□□ 0.45
LYSMD4-211ENST00000604213 E4F1Q66K89 784 aaPredicted RBP17.83■□□□□ 0.45
LYSMD4-211ENST00000604213 ERCC4Q92889 916 aaPredicted RBP17.83■□□□□ 0.45
LYSMD4-211ENST00000604213 SEC62Q99442 399 aaKnown RBP17.83■□□□□ 0.45
LYSMD4-211ENST00000604213 DBNLQ9UJU6 430 aaKnown RBP17.83■□□□□ 0.45
LYSMD4-211ENST00000604213 H2AFXP16104 143 aaPredicted RBP17.83■□□□□ 0.44
LYSMD4-211ENST00000604213 PLEKHO1Q53GL0 409 aaPredicted RBP17.83■□□□□ 0.44
LYSMD4-211ENST00000604213 ILDR1Q86SU0 546 aaPredicted RBP17.83■□□□□ 0.44
LYSMD4-211ENST00000604213 NAT10Q9H0A0 1025 aaKnown RBP17.83■□□□□ 0.44
LYSMD4-211ENST00000604213 RFX7Q2KHR2 1363 aa17.83■□□□□ 0.44
LYSMD4-211ENST00000604213 DDX58O95786 925 aaKnown RBP17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 EPHA10Q5JZY3 1008 aa17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 FMR1NBQ8N0W7 255 aaPredicted RBP17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 NDUFB9Q9Y6M9 179 aa17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 LTN1O94822 1766 aa17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 ME1P48163 572 aa17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 AIMP1Q12904 312 aaKnown RBP17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 MCMDC2Q4G0Z9 681 aa17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 CCDC93Q567U6 631 aa17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 CYB5RLQ6IPT4 315 aa17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 PPP1R13BQ96KQ4 1090 aa17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 ST7Q9NRC1 585 aa17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 EID1Q9Y6B2 187 aa17.82■□□□□ 0.44
LYSMD4-211ENST00000604213 FGD1P98174 961 aa17.81■□□□□ 0.44
LYSMD4-211ENST00000604213 DHX32Q7L7V1 743 aaKnown RBP17.81■□□□□ 0.44
LYSMD4-211ENST00000604213 FBXW7Q969H0 707 aa17.81■□□□□ 0.44
LYSMD4-211ENST00000604213 DDX21Q9NR30 783 aaKnown RBP eCLIP17.81■□□□□ 0.44
LYSMD4-211ENST00000604213 APOBRQ0VD83 1088 aa17.81■□□□□ 0.44
LYSMD4-211ENST00000604213 PDIA6Q15084 440 aa17.81■□□□□ 0.44
LYSMD4-211ENST00000604213 ARMCX5Q6P1M9 558 aa17.81■□□□□ 0.44
LYSMD4-211ENST00000604213 C14orf37Q86TY3 774 aa17.81■□□□□ 0.44
LYSMD4-211ENST00000604213 SALL1Q9NSC2 1324 aa17.81■□□□□ 0.44
LYSMD4-211ENST00000604213 NPHP1O15259 732 aa17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 HMGB1P09429 215 aaKnown RBP17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 FAM193AP78312 1265 aa17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 ERCC6LQ2NKX8 1250 aa17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 TNNI3KQ59H18 835 aa17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 CCDC150Q8NCX0 1101 aa17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 LRRN4CLQ8ND94 238 aa17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 LRRC59Q96AG4 307 aaKnown RBP17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 PCDHA7Q9UN72 937 aa17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 FPGT-TNNI3KV9GXZ4 949 aa17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 PSDA5PKW4 1024 aaPredicted RBP17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 MRPS27Q92552 414 aaKnown RBP17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 PXDNQ92626 1479 aa17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 COPRSQ9NQ92 184 aa17.8■□□□□ 0.44
LYSMD4-211ENST00000604213 CCDC66A2RUB6 948 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 NEURL1BA8MQ27 555 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 KCNJ6P48051 423 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms