RNA–Protein interactions for RNA: ENST00000602212.5

NPAS1-208, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-208ENST00000602212 CCDC158Q5M9N0 1113 aa27.51■■□□□ 1.99
NPAS1-208ENST00000602212 GORABQ5T7V8 394 aa27.51■■□□□ 1.99
NPAS1-208ENST00000602212 ZNF589Q86UQ0 364 aaPredicted RBP27.51■■□□□ 1.99
NPAS1-208ENST00000602212 UPF3BQ9BZI7 483 aaKnown RBP27.51■■□□□ 1.99
NPAS1-208ENST00000602212 BCL2L12Q9HB09 334 aa27.51■■□□□ 1.99
NPAS1-208ENST00000602212 MAP4K1Q92918 833 aa27.5■■□□□ 1.99
NPAS1-208ENST00000602212 NARFQ9UHQ1 456 aa27.5■■□□□ 1.99
NPAS1-208ENST00000602212 CIZ1Q9ULV3 898 aaPredicted RBP27.5■■□□□ 1.99
NPAS1-208ENST00000602212 RTL9Q8NET4 1388 aa27.5■■□□□ 1.99
NPAS1-208ENST00000602212 C4BP0C0L5 1744 aa27.5■■□□□ 1.99
NPAS1-208ENST00000602212 CHGBP05060 677 aa27.5■■□□□ 1.99
NPAS1-208ENST00000602212 MCM2P49736 904 aa27.49■■□□□ 1.99
NPAS1-208ENST00000602212 NECTIN1Q15223 517 aa27.49■■□□□ 1.99
NPAS1-208ENST00000602212 CCDC152Q4G0S7 254 aa27.49■■□□□ 1.99
NPAS1-208ENST00000602212 TTC39AQ5SRH9 613 aa27.49■■□□□ 1.99
NPAS1-208ENST00000602212 USPL1Q5W0Q7 1092 aa27.49■■□□□ 1.99
NPAS1-208ENST00000602212 BCL11BQ9C0K0 894 aaPredicted RBP27.49■■□□□ 1.99
NPAS1-208ENST00000602212 RBM8AQ9Y5S9 174 aaKnown RBP27.49■■□□□ 1.99
NPAS1-208ENST00000602212 BRWD3Q6RI45 1802 aa27.49■■□□□ 1.99
NPAS1-208ENST00000602212 PDE8BO95263 885 aa27.49■■□□□ 1.99
NPAS1-208ENST00000602212 PRPF40BQ6NWY9 871 aaKnown RBP27.49■■□□□ 1.99
NPAS1-208ENST00000602212 KCNB2Q92953 911 aa27.49■■□□□ 1.99
NPAS1-208ENST00000602212 SEC31BQ9NQW1 1179 aa27.49■■□□□ 1.99
NPAS1-208ENST00000602212 TBC1D9BQ66K14 1250 aa27.48■■□□□ 1.99
NPAS1-208ENST00000602212 SRP68Q9UHB9 627 aaKnown RBP27.48■■□□□ 1.99
NPAS1-208ENST00000602212 RTCBQ9Y3I0 505 aaKnown RBP27.48■■□□□ 1.99
NPAS1-208ENST00000602212 ABCC12Q96J65 1359 aa27.48■■□□□ 1.99
NPAS1-208ENST00000602212 EP400Q96L91 3159 aa27.48■■□□□ 1.99
NPAS1-208ENST00000602212 AMIGO3Q86WK7 504 aa27.47■■□□□ 1.99
NPAS1-208ENST00000602212 CASZ1Q86V15 1759 aa27.47■■□□□ 1.99
NPAS1-208ENST00000602212 MROH5Q6ZUA9 1318 aa27.47■■□□□ 1.99
NPAS1-208ENST00000602212 COL24A1Q17RW2 1714 aa27.46■■□□□ 1.99
NPAS1-208ENST00000602212 ERFEQ4G0M1 354 aa27.46■■□□□ 1.99
NPAS1-208ENST00000602212 TICAM2Q86XR7 235 aa27.46■■□□□ 1.99
NPAS1-208ENST00000602212 IL27Q8NEV9 243 aa27.46■■□□□ 1.99
NPAS1-208ENST00000602212 C4AP0C0L4 1744 aa27.46■■□□□ 1.99
NPAS1-208ENST00000602212 TAF5LO75529 589 aa27.46■■□□□ 1.99
NPAS1-208ENST00000602212 BICDL1Q6ZP65 573 aa27.46■■□□□ 1.99
NPAS1-208ENST00000602212 ARAP2Q8WZ64 1704 aa27.46■■□□□ 1.99
NPAS1-208ENST00000602212 SCARF1Q14162 830 aa27.45■■□□□ 1.98
NPAS1-208ENST00000602212 TMX3Q96JJ7 454 aa27.45■■□□□ 1.98
NPAS1-208ENST00000602212 SEC62Q99442 399 aaKnown RBP27.45■■□□□ 1.98
NPAS1-208ENST00000602212 KCNJ4P48050 445 aa27.44■■□□□ 1.98
NPAS1-208ENST00000602212 FKBP4Q02790 459 aaKnown RBP eCLIP27.44■■□□□ 1.98
NPAS1-208ENST00000602212 MCMDC2Q4G0Z9 681 aa27.44■■□□□ 1.98
NPAS1-208ENST00000602212 CREB3L3Q68CJ9 461 aa27.44■■□□□ 1.98
NPAS1-208ENST00000602212 ZPR1O75312 459 aa27.44■■□□□ 1.98
NPAS1-208ENST00000602212 MPHOSPH8Q99549 860 aa27.44■■□□□ 1.98
NPAS1-208ENST00000602212 CCDC129Q6ZRS4 1044 aa27.43■■□□□ 1.98
NPAS1-208ENST00000602212 ARHGEF1Q92888 912 aaKnown RBP27.43■■□□□ 1.98
NPAS1-208ENST00000602212 COL4A1P02462 1669 aa27.43■■□□□ 1.98
NPAS1-208ENST00000602212 PUM3Q15397 648 aaKnown RBP27.43■■□□□ 1.98
NPAS1-208ENST00000602212 HELBQ8NG08 1087 aaPredicted RBP27.43■■□□□ 1.98
NPAS1-208ENST00000602212 AKAP11Q9UKA4 1901 aa27.42■■□□□ 1.98
NPAS1-208ENST00000602212 KRT27Q7Z3Y8 459 aa27.42■■□□□ 1.98
NPAS1-208ENST00000602212 TTC14Q96N46 770 aa27.42■■□□□ 1.98
NPAS1-208ENST00000602212 LRRC4BQ9NT99 713 aa27.42■■□□□ 1.98
NPAS1-208ENST00000602212 SLC27A2O14975 620 aa27.41■■□□□ 1.98
NPAS1-208ENST00000602212 ZKSCAN1P17029 563 aaPredicted RBP27.41■■□□□ 1.98
NPAS1-208ENST00000602212 FGFR2P21802 821 aa27.41■■□□□ 1.98
NPAS1-208ENST00000602212 ADCK5Q3MIX3 580 aa27.41■■□□□ 1.98
NPAS1-208ENST00000602212 SLFNL1Q499Z3 407 aa27.41■■□□□ 1.98
NPAS1-208ENST00000602212 FAM196AQ6ZSG2 479 aa27.41■■□□□ 1.98
NPAS1-208ENST00000602212 CASTP20810 708 aaKnown RBP27.41■■□□□ 1.98
NPAS1-208ENST00000602212 IGHMBP2P38935 993 aaKnown RBP27.41■■□□□ 1.98
NPAS1-208ENST00000602212 RAB3GAP1Q15042 981 aa27.41■■□□□ 1.98
NPAS1-208ENST00000602212 C3orf67Q6ZVT6 689 aa27.41■■□□□ 1.98
NPAS1-208ENST00000602212 NOL8Q76FK4 1167 aaKnown RBP27.41■■□□□ 1.98
NPAS1-208ENST00000602212 HELLSQ9NRZ9 838 aa27.41■■□□□ 1.98
NPAS1-208ENST00000602212 ZMYM1Q5SVZ6 1142 aa27.4■■□□□ 1.98
NPAS1-208ENST00000602212 ZGPATQ8N5A5 531 aaKnown RBP27.4■■□□□ 1.98
NPAS1-208ENST00000602212 LPIN2Q92539 896 aa27.4■■□□□ 1.98
NPAS1-208ENST00000602212 ZNF512BQ96KM6 892 aaPredicted RBP27.4■■□□□ 1.98
NPAS1-208ENST00000602212 JAKMIP1Q96N16 626 aaKnown RBP27.4■■□□□ 1.98
NPAS1-208ENST00000602212 SETDB2Q96T68 719 aa27.4■■□□□ 1.98
NPAS1-208ENST00000602212 TM6SF1Q9BZW5 370 aa27.4■■□□□ 1.98
NPAS1-208ENST00000602212 RNF113AO15541 343 aaKnown RBP27.4■■□□□ 1.98
NPAS1-208ENST00000602212 ZAP70P43403 619 aa27.4■■□□□ 1.98
NPAS1-208ENST00000602212 PI16Q6UXB8 463 aa27.4■■□□□ 1.98
NPAS1-208ENST00000602212 MCAMP43121 646 aa27.39■■□□□ 1.98
NPAS1-208ENST00000602212 SF3B3Q15393 1217 aaKnown RBP27.39■■□□□ 1.98
NPAS1-208ENST00000602212 SSFA2P28290 1259 aa27.38■■□□□ 1.97
NPAS1-208ENST00000602212 CUL4AQ13619 759 aa27.38■■□□□ 1.97
NPAS1-208ENST00000602212 SLC10A5Q5PT55 438 aa27.38■■□□□ 1.97
NPAS1-208ENST00000602212 NYXQ9GZU5 481 aa27.38■■□□□ 1.97
NPAS1-208ENST00000602212 RPAP1Q9BWH6 1393 aaPredicted RBP27.38■■□□□ 1.97
NPAS1-208ENST00000602212 PHF14O94880 888 aa27.38■■□□□ 1.97
NPAS1-208ENST00000602212 CPA1P15085 419 aa27.38■■□□□ 1.97
NPAS1-208ENST00000602212 GTF2E1P29083 439 aaPredicted RBP27.38■■□□□ 1.97
NPAS1-208ENST00000602212 RNF20Q5VTR2 975 aa27.38■■□□□ 1.97
NPAS1-208ENST00000602212 CWC22Q9HCG8 908 aaKnown RBP27.38■■□□□ 1.97
NPAS1-208ENST00000602212 ZSWIM6Q9HCJ5 1215 aa27.38■■□□□ 1.97
NPAS1-208ENST00000602212 CCDC102BQ68D86 513 aa27.37■■□□□ 1.97
NPAS1-208ENST00000602212 TNPO1Q92973 898 aaKnown RBP27.37■■□□□ 1.97
NPAS1-208ENST00000602212 CDC5LQ99459 802 aaKnown RBP27.37■■□□□ 1.97
NPAS1-208ENST00000602212 PHKA1P46020 1223 aa27.37■■□□□ 1.97
NPAS1-208ENST00000602212 TRAPPC3LQ5T215 181 aa27.37■■□□□ 1.97
NPAS1-208ENST00000602212 MYH7P12883 1935 aa27.37■■□□□ 1.97
NPAS1-208ENST00000602212 MAST3O60307 1309 aa27.36■■□□□ 1.97
NPAS1-208ENST00000602212 RFC4P35249 363 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms