RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 TICAM2Q86XR7 235 aa17.58■□□□□ 0.4
ZNF548-212ENST00000602086 CNBD1Q8NA66 436 aa17.58■□□□□ 0.4
ZNF548-212ENST00000602086 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.58■□□□□ 0.4
ZNF548-212ENST00000602086 AK9Q5TCS8 1911 aa17.57■□□□□ 0.4
ZNF548-212ENST00000602086 ATP5JP18859 108 aa17.57■□□□□ 0.4
ZNF548-212ENST00000602086 IGHMBP2P38935 993 aaKnown RBP17.57■□□□□ 0.4
ZNF548-212ENST00000602086 GPR162Q16538 588 aa17.57■□□□□ 0.4
ZNF548-212ENST00000602086 VGLL2Q8N8G2 317 aa17.57■□□□□ 0.4
ZNF548-212ENST00000602086 CCDC85AQ96PX6 553 aaPredicted RBP17.57■□□□□ 0.4
ZNF548-212ENST00000602086 CNNM1Q9NRU3 951 aa17.57■□□□□ 0.4
ZNF548-212ENST00000602086 DBNLQ9UJU6 430 aaKnown RBP17.57■□□□□ 0.4
ZNF548-212ENST00000602086 SERPINB2P05120 415 aa17.56■□□□□ 0.4
ZNF548-212ENST00000602086 PRR5LQ6MZQ0 368 aa17.56■□□□□ 0.4
ZNF548-212ENST00000602086 CASC1Q6TDU7 716 aa17.56■□□□□ 0.4
ZNF548-212ENST00000602086 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.56■□□□□ 0.4
ZNF548-212ENST00000602086 MPHOSPH8Q99549 860 aa17.56■□□□□ 0.4
ZNF548-212ENST00000602086 CCDC8Q9H0W5 538 aaPredicted RBP17.56■□□□□ 0.4
ZNF548-212ENST00000602086 POLRMTO00411 1230 aaKnown RBP17.55■□□□□ 0.4
ZNF548-212ENST00000602086 PDE8BO95263 885 aa17.55■□□□□ 0.4
ZNF548-212ENST00000602086 ST5P78524 1137 aa17.55■□□□□ 0.4
ZNF548-212ENST00000602086 METTL24Q5JXM2 366 aa17.55■□□□□ 0.4
ZNF548-212ENST00000602086 TBC1D9Q6ZT07 1266 aa17.55■□□□□ 0.4
ZNF548-212ENST00000602086 CNTROBQ8N137 903 aa17.55■□□□□ 0.4
ZNF548-212ENST00000602086 NLGN2Q8NFZ4 835 aa17.55■□□□□ 0.4
ZNF548-212ENST00000602086 UPF2Q9HAU5 1272 aaKnown RBP17.55■□□□□ 0.4
ZNF548-212ENST00000602086 ARAP2Q8WZ64 1704 aa17.55■□□□□ 0.4
ZNF548-212ENST00000602086 A0A1B0GUL7 405 aa17.54■□□□□ 0.4
ZNF548-212ENST00000602086 KLRG2A4D1S0 409 aaPredicted RBP17.54■□□□□ 0.4
ZNF548-212ENST00000602086 ANKRD18AQ8IVF6 992 aa17.54■□□□□ 0.4
ZNF548-212ENST00000602086 BCL11AQ9H165 835 aa17.54■□□□□ 0.4
ZNF548-212ENST00000602086 SEC31BQ9NQW1 1179 aa17.54■□□□□ 0.4
ZNF548-212ENST00000602086 BSDC1Q9NW68 430 aaPredicted RBP17.54■□□□□ 0.4
ZNF548-212ENST00000602086 TNRC6CQ9HCJ0 1690 aaKnown RBP17.54■□□□□ 0.4
ZNF548-212ENST00000602086 SPEF2Q9C093 1822 aa17.54■□□□□ 0.4
ZNF548-212ENST00000602086 DDR1Q08345 913 aa17.53■□□□□ 0.4
ZNF548-212ENST00000602086 CRY2Q49AN0 593 aa17.53■□□□□ 0.4
ZNF548-212ENST00000602086 TSHZ3Q63HK5 1081 aa17.53■□□□□ 0.4
ZNF548-212ENST00000602086 C3orf67Q6ZVT6 689 aa17.53■□□□□ 0.4
ZNF548-212ENST00000602086 EVI5LQ96CN4 794 aa17.53■□□□□ 0.4
ZNF548-212ENST00000602086 ZNF512BQ96KM6 892 aaPredicted RBP17.53■□□□□ 0.4
ZNF548-212ENST00000602086 DBNDD2Q9BQY9 259 aa17.53■□□□□ 0.4
ZNF548-212ENST00000602086 TLR7Q9NYK1 1049 aaKnown RBP17.53■□□□□ 0.4
ZNF548-212ENST00000602086 RFX7Q2KHR2 1363 aa17.53■□□□□ 0.4
ZNF548-212ENST00000602086 NPHP1O15259 732 aa17.52■□□□□ 0.4
ZNF548-212ENST00000602086 FGFR2P21802 821 aa17.52■□□□□ 0.4
ZNF548-212ENST00000602086 POLD1P28340 1107 aa17.52■□□□□ 0.4
ZNF548-212ENST00000602086 PUM3Q15397 648 aaKnown RBP17.52■□□□□ 0.4
ZNF548-212ENST00000602086 ATP2B3Q16720 1220 aa17.52■□□□□ 0.4
ZNF548-212ENST00000602086 A0A1B0GUL6 1792 aa17.52■□□□□ 0.4
ZNF548-212ENST00000602086 TRIM6-TRIM34B2RNG4 842 aa17.51■□□□□ 0.39
ZNF548-212ENST00000602086 EPB41L2O43491 1005 aaKnown RBP17.51■□□□□ 0.39
ZNF548-212ENST00000602086 SEC24BO95487 1268 aa17.51■□□□□ 0.39
ZNF548-212ENST00000602086 C1QTNF8P60827 252 aa17.51■□□□□ 0.39
ZNF548-212ENST00000602086 TIMM10P62072 90 aa17.51■□□□□ 0.39
ZNF548-212ENST00000602086 RPS8P62241 208 aaKnown RBP17.51■□□□□ 0.39
ZNF548-212ENST00000602086 MSL1Q68DK7 614 aa17.51■□□□□ 0.39
ZNF548-212ENST00000602086 DDX46Q7L014 1031 aaKnown RBP17.51■□□□□ 0.39
ZNF548-212ENST00000602086 LPIN2Q92539 896 aa17.51■□□□□ 0.39
ZNF548-212ENST00000602086 MSH5O43196 834 aa17.5■□□□□ 0.39
ZNF548-212ENST00000602086 HOXA10P31260 410 aaPredicted RBP17.5■□□□□ 0.39
ZNF548-212ENST00000602086 CCDC158Q5M9N0 1113 aa17.5■□□□□ 0.39
ZNF548-212ENST00000602086 XAGE2Q96GT9 111 aa17.5■□□□□ 0.39
ZNF548-212ENST00000602086 NEUROD6Q96NK8 337 aa17.5■□□□□ 0.39
ZNF548-212ENST00000602086 HAUS7Q99871 368 aa17.5■□□□□ 0.39
ZNF548-212ENST00000602086 HIP1O00291 1037 aa17.49■□□□□ 0.39
ZNF548-212ENST00000602086 ZBTB22O15209 634 aa17.49■□□□□ 0.39
ZNF548-212ENST00000602086 CHMLP26374 656 aa17.49■□□□□ 0.39
ZNF548-212ENST00000602086 SLC16A10Q8TF71 515 aa17.49■□□□□ 0.39
ZNF548-212ENST00000602086 RILPL2Q969X0 211 aa17.49■□□□□ 0.39
ZNF548-212ENST00000602086 BRIP1Q9BX63 1249 aa17.49■□□□□ 0.39
ZNF548-212ENST00000602086 PARP3Q9Y6F1 533 aa17.49■□□□□ 0.39
ZNF548-212ENST00000602086 SLC5A1P13866 664 aa17.48■□□□□ 0.39
ZNF548-212ENST00000602086 CHRNDQ07001 517 aa17.48■□□□□ 0.39
ZNF548-212ENST00000602086 GRAPQ13588 217 aa17.48■□□□□ 0.39
ZNF548-212ENST00000602086 UBE4AQ14139 1066 aa17.48■□□□□ 0.39
ZNF548-212ENST00000602086 GRAPLQ8TC17 118 aaPredicted RBP17.48■□□□□ 0.39
ZNF548-212ENST00000602086 TBC1D32Q96NH3 1257 aa17.48■□□□□ 0.39
ZNF548-212ENST00000602086 ANKRD2Q9GZV1 360 aa17.48■□□□□ 0.39
ZNF548-212ENST00000602086 ANKRD31Q8N7Z5 1873 aa17.48■□□□□ 0.39
ZNF548-212ENST00000602086 REC8O95072 547 aa17.47■□□□□ 0.39
ZNF548-212ENST00000602086 YBX3P16989 372 aaKnown RBP eCLIP17.47■□□□□ 0.39
ZNF548-212ENST00000602086 TMC4Q7Z404 712 aa17.47■□□□□ 0.39
ZNF548-212ENST00000602086 CELF1Q92879 486 aaKnown RBP17.47■□□□□ 0.39
ZNF548-212ENST00000602086 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
ZNF548-212ENST00000602086 CRAMP1Q96RY5 1269 aa17.47■□□□□ 0.39
ZNF548-212ENST00000602086 BOLA2Q9H3K6 86 aa17.47■□□□□ 0.39
ZNF548-212ENST00000602086 MINPP1Q9UNW1 487 aa17.47■□□□□ 0.39
ZNF548-212ENST00000602086 COL4A1P02462 1669 aa17.47■□□□□ 0.39
ZNF548-212ENST00000602086 TAF1P21675 1872 aa17.47■□□□□ 0.39
ZNF548-212ENST00000602086 MMP10P09238 476 aa17.46■□□□□ 0.39
ZNF548-212ENST00000602086 IFIT1P09914 478 aaKnown RBP17.46■□□□□ 0.39
ZNF548-212ENST00000602086 UQCRFS1P1P0C7P4 283 aa17.46■□□□□ 0.39
ZNF548-212ENST00000602086 GORABQ5T7V8 394 aa17.46■□□□□ 0.39
ZNF548-212ENST00000602086 ESYT1Q9BSJ8 1104 aa17.46■□□□□ 0.39
ZNF548-212ENST00000602086 BBOX1O75936 387 aa17.45■□□□□ 0.38
ZNF548-212ENST00000602086 ARID4AP29374 1257 aaPredicted RBP17.45■□□□□ 0.38
ZNF548-212ENST00000602086 ANP32AP39687 249 aaKnown RBP17.45■□□□□ 0.38
ZNF548-212ENST00000602086 RBM25P49756 843 aaKnown RBP17.45■□□□□ 0.38
ZNF548-212ENST00000602086 MFAP1P55081 439 aaKnown RBP17.45■□□□□ 0.38
ZNF548-212ENST00000602086 TTC39AQ5SRH9 613 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms