RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685		Q6ZUG5	572 aa		19.47	■□□□□ 0.71
CAPN12-211	ENST00000601685	SLFNL1	Q499Z3	407 aa		19.46	■□□□□ 0.71
CAPN12-211	ENST00000601685	LINS1	Q8NG48	757 aa		19.46	■□□□□ 0.71
CAPN12-211	ENST00000601685	SMARCC2	Q8TAQ2	1214 aa		19.46	■□□□□ 0.71
CAPN12-211	ENST00000601685	GOLPH3L	Q9H4A5	285 aa		19.46	■□□□□ 0.71
CAPN12-211	ENST00000601685	SNW1	Q13573	536 aa	Known RBP	19.46	■□□□□ 0.71
CAPN12-211	ENST00000601685	FILIP1	Q7Z7B0	1213 aa		19.46	■□□□□ 0.71
CAPN12-211	ENST00000601685	ANO10	Q9NW15	660 aa		19.46	■□□□□ 0.71
CAPN12-211	ENST00000601685	HSP90B1	P14625	803 aa	Known RBP	19.45	■□□□□ 0.7
CAPN12-211	ENST00000601685	CEBPZ	Q03701	1054 aa	Known RBP	19.45	■□□□□ 0.7
CAPN12-211	ENST00000601685	BCL11B	Q9C0K0	894 aa	Predicted RBP	19.45	■□□□□ 0.7
CAPN12-211	ENST00000601685	NFAT5	O94916	1531 aa		19.45	■□□□□ 0.7
CAPN12-211	ENST00000601685	LLPH	Q9BRT6	129 aa	Known RBP	19.45	■□□□□ 0.7
CAPN12-211	ENST00000601685	TRMT1	Q9NXH9	659 aa	Known RBP	19.45	■□□□□ 0.7
CAPN12-211	ENST00000601685	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	19.45	■□□□□ 0.7
CAPN12-211	ENST00000601685		V9GYY5	206 aa	Predicted RBP	19.45	■□□□□ 0.7
CAPN12-211	ENST00000601685	COL15A1	P39059	1388 aa		19.45	■□□□□ 0.7
CAPN12-211	ENST00000601685	RGPD2	P0DJD1	1756 aa		19.45	■□□□□ 0.7
CAPN12-211	ENST00000601685	SLU7	O95391	586 aa	Known RBP	19.44	■□□□□ 0.7
CAPN12-211	ENST00000601685	SCRN1	Q12765	414 aa		19.44	■□□□□ 0.7
CAPN12-211	ENST00000601685	NAA16	Q6N069	864 aa	Predicted RBP	19.44	■□□□□ 0.7
CAPN12-211	ENST00000601685	FBXO38	Q6PIJ6	1188 aa		19.44	■□□□□ 0.7
CAPN12-211	ENST00000601685	CCDC73	Q6ZRK6	1079 aa		19.44	■□□□□ 0.7
CAPN12-211	ENST00000601685	KIF2A	O00139	706 aa	Predicted RBP	19.44	■□□□□ 0.7
CAPN12-211	ENST00000601685	PSME1	Q06323	249 aa		19.44	■□□□□ 0.7
CAPN12-211	ENST00000601685	ELF2	Q15723	593 aa		19.44	■□□□□ 0.7
CAPN12-211	ENST00000601685	PLEKHO1	Q53GL0	409 aa	Predicted RBP	19.44	■□□□□ 0.7
CAPN12-211	ENST00000601685	ENGASE	Q8NFI3	743 aa		19.44	■□□□□ 0.7
CAPN12-211	ENST00000601685	SIL1	Q9H173	461 aa		19.44	■□□□□ 0.7
CAPN12-211	ENST00000601685	MRC1	P22897	1456 aa		19.44	■□□□□ 0.7
CAPN12-211	ENST00000601685	ERBB3	P21860	1342 aa		19.43	■□□□□ 0.7
CAPN12-211	ENST00000601685	GSDMD	P57764	484 aa		19.43	■□□□□ 0.7
CAPN12-211	ENST00000601685	LMO7	Q8WWI1	1683 aa		19.43	■□□□□ 0.7
CAPN12-211	ENST00000601685	PRAMEF22	A3QJZ6	481 aa		19.43	■□□□□ 0.7
CAPN12-211	ENST00000601685	KIN	O60870	393 aa	Known RBP	19.43	■□□□□ 0.7
CAPN12-211	ENST00000601685	EDC3	Q96F86	508 aa	Known RBP	19.43	■□□□□ 0.7
CAPN12-211	ENST00000601685		U3KPZ7	1027 aa	Predicted RBP	19.43	■□□□□ 0.7
CAPN12-211	ENST00000601685	MYH15	Q9Y2K3	1946 aa		19.42	■□□□□ 0.7
CAPN12-211	ENST00000601685	RNMT	O43148	476 aa	Known RBP	19.42	■□□□□ 0.7
CAPN12-211	ENST00000601685	FAM160A1	Q05DH4	1040 aa		19.42	■□□□□ 0.7
CAPN12-211	ENST00000601685	ESCO1	Q5FWF5	840 aa		19.42	■□□□□ 0.7
CAPN12-211	ENST00000601685	FTO	Q9C0B1	505 aa	Known RBP eCLIP	19.42	■□□□□ 0.7
CAPN12-211	ENST00000601685	FER1L4	A9Z1Z3	1794 aa		19.42	■□□□□ 0.7
CAPN12-211	ENST00000601685	PFKFB2	O60825	505 aa		19.42	■□□□□ 0.7
CAPN12-211	ENST00000601685	C1orf141	Q5JVX7	400 aa		19.42	■□□□□ 0.7
CAPN12-211	ENST00000601685	ATL3	Q6DD88	541 aa		19.42	■□□□□ 0.7
CAPN12-211	ENST00000601685	CEP57L1	Q8IYX8	460 aa		19.42	■□□□□ 0.7
CAPN12-211	ENST00000601685	KCNH5	Q8NCM2	988 aa		19.42	■□□□□ 0.7
CAPN12-211	ENST00000601685	OSBPL5	Q9H0X9	879 aa	Predicted RBP	19.42	■□□□□ 0.7
CAPN12-211	ENST00000601685		A0A0U1RQG5	324 aa	Predicted RBP	19.41	■□□□□ 0.7
CAPN12-211	ENST00000601685	NSUN7	Q8NE18	718 aa	Known RBP	19.41	■□□□□ 0.7
CAPN12-211	ENST00000601685	USP28	Q96RU2	1077 aa		19.41	■□□□□ 0.7
CAPN12-211	ENST00000601685	NCAPD2	Q15021	1401 aa		19.41	■□□□□ 0.7
CAPN12-211	ENST00000601685	HEG1	Q9ULI3	1381 aa		19.41	■□□□□ 0.7
CAPN12-211	ENST00000601685	PXDN	Q92626	1479 aa		19.41	■□□□□ 0.7
CAPN12-211	ENST00000601685		A0A087WWV3	80 aa		19.41	■□□□□ 0.7
CAPN12-211	ENST00000601685	CYP21A2	P08686	494 aa		19.41	■□□□□ 0.7
CAPN12-211	ENST00000601685	AOPEP	Q8N6M6	819 aa		19.41	■□□□□ 0.7
CAPN12-211	ENST00000601685	ZNF396	Q96N95	335 aa	Predicted RBP	19.41	■□□□□ 0.7
CAPN12-211	ENST00000601685	IMPACT	Q9P2X3	320 aa		19.41	■□□□□ 0.7
CAPN12-211	ENST00000601685	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	19.4	■□□□□ 0.7
CAPN12-211	ENST00000601685	ATP5J	P18859	108 aa		19.4	■□□□□ 0.7
CAPN12-211	ENST00000601685	NBPF11	Q86T75	865 aa		19.4	■□□□□ 0.7
CAPN12-211	ENST00000601685	KLHDC4	Q8TBB5	520 aa		19.4	■□□□□ 0.7
CAPN12-211	ENST00000601685	NAT10	Q9H0A0	1025 aa	Known RBP	19.4	■□□□□ 0.7
CAPN12-211	ENST00000601685	RFX7	Q2KHR2	1363 aa		19.4	■□□□□ 0.7
CAPN12-211	ENST00000601685	AMOT	Q4VCS5	1084 aa		19.39	■□□□□ 0.7
CAPN12-211	ENST00000601685	L2HGDH	Q9H9P8	463 aa		19.39	■□□□□ 0.7
CAPN12-211	ENST00000601685	ZNF609	O15014	1411 aa		19.39	■□□□□ 0.69
CAPN12-211	ENST00000601685	CTDNEP1	O95476	244 aa		19.39	■□□□□ 0.69
CAPN12-211	ENST00000601685	DDX58	O95786	925 aa	Known RBP	19.39	■□□□□ 0.69
CAPN12-211	ENST00000601685	FSIP1	Q8NA03	581 aa		19.39	■□□□□ 0.69
CAPN12-211	ENST00000601685	LRRC2	Q9BYS8	371 aa		19.39	■□□□□ 0.69
CAPN12-211	ENST00000601685	FAM193A	P78312	1265 aa		19.39	■□□□□ 0.69
CAPN12-211	ENST00000601685	CCDC129	Q6ZRS4	1044 aa		19.39	■□□□□ 0.69
CAPN12-211	ENST00000601685	PTPDC1	A2A3K4	754 aa		19.38	■□□□□ 0.69
CAPN12-211	ENST00000601685	FOSB	P53539	338 aa		19.38	■□□□□ 0.69
CAPN12-211	ENST00000601685	E4F1	Q66K89	784 aa	Predicted RBP	19.38	■□□□□ 0.69
CAPN12-211	ENST00000601685	ZNF446	Q9NWS9	450 aa		19.38	■□□□□ 0.69
CAPN12-211	ENST00000601685	CCDC66	A2RUB6	948 aa		19.38	■□□□□ 0.69
CAPN12-211	ENST00000601685	IGKV5-2	P06315	115 aa		19.38	■□□□□ 0.69
CAPN12-211	ENST00000601685	FGD1	P98174	961 aa		19.38	■□□□□ 0.69
CAPN12-211	ENST00000601685	AIMP1	Q12904	312 aa	Known RBP	19.38	■□□□□ 0.69
CAPN12-211	ENST00000601685	DBNL	Q9UJU6	430 aa	Known RBP	19.38	■□□□□ 0.69
CAPN12-211	ENST00000601685	HMGB1	P09429	215 aa	Known RBP	19.37	■□□□□ 0.69
CAPN12-211	ENST00000601685	H2AFX	P16104	143 aa	Predicted RBP	19.37	■□□□□ 0.69
CAPN12-211	ENST00000601685	MCMDC2	Q4G0Z9	681 aa		19.37	■□□□□ 0.69
CAPN12-211	ENST00000601685	STOX1	Q6ZVD7	989 aa		19.37	■□□□□ 0.69
CAPN12-211	ENST00000601685	SEC62	Q99442	399 aa	Known RBP	19.37	■□□□□ 0.69
CAPN12-211	ENST00000601685	GC	P02774	474 aa		19.37	■□□□□ 0.69
CAPN12-211	ENST00000601685	ME1	P48163	572 aa		19.37	■□□□□ 0.69
CAPN12-211	ENST00000601685	DHX32	Q7L7V1	743 aa	Known RBP	19.37	■□□□□ 0.69
CAPN12-211	ENST00000601685	PPP1R13B	Q96KQ4	1090 aa		19.37	■□□□□ 0.69
CAPN12-211	ENST00000601685	DDX21	Q9NR30	783 aa	Known RBP eCLIP	19.37	■□□□□ 0.69
CAPN12-211	ENST00000601685	PSD	A5PKW4	1024 aa	Predicted RBP	19.36	■□□□□ 0.69
CAPN12-211	ENST00000601685	FMR1NB	Q8N0W7	255 aa	Predicted RBP	19.36	■□□□□ 0.69
CAPN12-211	ENST00000601685	CCDC150	Q8NCX0	1101 aa		19.36	■□□□□ 0.69
CAPN12-211	ENST00000601685	ERCC4	Q92889	916 aa	Predicted RBP	19.36	■□□□□ 0.69
CAPN12-211	ENST00000601685	OVOS2	A0A0G2JMS6	1433 aa		19.36	■□□□□ 0.69
CAPN12-211	ENST00000601685	CHGB	P05060	677 aa		19.36	■□□□□ 0.69

Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms