RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 TTC16Q8NEE8 873 aa11.42□□□□□ -0.58
LINC00343-208ENST00000599264 SPACA7Q96KW9 195 aa11.42□□□□□ -0.58
LINC00343-208ENST00000599264 TMEM88BA6NKF7 163 aa11.41□□□□□ -0.58
LINC00343-208ENST00000599264 ZBTB39O15060 712 aa11.41□□□□□ -0.58
LINC00343-208ENST00000599264 SSFA2P28290 1259 aa11.41□□□□□ -0.58
LINC00343-208ENST00000599264 GRIK5Q16478 980 aa11.41□□□□□ -0.58
LINC00343-208ENST00000599264 OR13H1Q8NG92 308 aa11.41□□□□□ -0.58
LINC00343-208ENST00000599264 LENG1Q96BZ8 264 aaPredicted RBP11.41□□□□□ -0.58
LINC00343-208ENST00000599264 HYAL2Q12891 473 aa11.4□□□□□ -0.58
LINC00343-208ENST00000599264 CACTIN-AS1Q8N1I8 211 aa11.4□□□□□ -0.58
LINC00343-208ENST00000599264 CECR2Q9BXF3 1484 aa11.39□□□□□ -0.59
LINC00343-208ENST00000599264 SELPP16109 830 aa11.39□□□□□ -0.59
LINC00343-208ENST00000599264 SCNN1AP37088 669 aa11.39□□□□□ -0.59
LINC00343-208ENST00000599264 NOM1Q5C9Z4 860 aaKnown RBP11.39□□□□□ -0.59
LINC00343-208ENST00000599264 PDE12Q6L8Q7 609 aaKnown RBP11.39□□□□□ -0.59
LINC00343-208ENST00000599264 ILDR2Q71H61 639 aa11.39□□□□□ -0.59
LINC00343-208ENST00000599264 FBXO11Q86XK2 927 aa11.39□□□□□ -0.59
LINC00343-208ENST00000599264 ABI2Q9NYB9 513 aaPredicted RBP11.39□□□□□ -0.59
LINC00343-208ENST00000599264 USP21Q9UK80 565 aa11.39□□□□□ -0.59
LINC00343-208ENST00000599264 CC2D2AQ9P2K1 1620 aa11.38□□□□□ -0.59
LINC00343-208ENST00000599264 ADGRE1Q14246 886 aa11.38□□□□□ -0.59
LINC00343-208ENST00000599264 ALKBH2Q6NS38 261 aa11.38□□□□□ -0.59
LINC00343-208ENST00000599264 DCAF11Q8TEB1 546 aa11.38□□□□□ -0.59
LINC00343-208ENST00000599264 GTF3C2Q8WUA4 911 aaPredicted RBP11.38□□□□□ -0.59
LINC00343-208ENST00000599264 NUDT16Q96DE0 195 aaKnown RBP11.38□□□□□ -0.59
LINC00343-208ENST00000599264 GDF6Q6KF10 455 aaPredicted RBP11.37□□□□□ -0.59
LINC00343-208ENST00000599264 TXNRD3Q86VQ6 643 aa11.37□□□□□ -0.59
LINC00343-208ENST00000599264 MBTPS1Q14703 1052 aa11.36□□□□□ -0.59
LINC00343-208ENST00000599264 ZNF438Q7Z4V0 828 aa11.36□□□□□ -0.59
LINC00343-208ENST00000599264 B4GALNT3Q6L9W6 998 aa11.35□□□□□ -0.59
LINC00343-208ENST00000599264 SHISA2Q6UWI4 295 aa11.35□□□□□ -0.59
LINC00343-208ENST00000599264 ATCAYQ86WG3 371 aa11.35□□□□□ -0.59
LINC00343-208ENST00000599264 IL22RA1Q8N6P7 574 aa11.35□□□□□ -0.59
LINC00343-208ENST00000599264 MUC3BQ9H195 1237 aa11.35□□□□□ -0.59
LINC00343-208ENST00000599264 ELP3Q9H9T3 547 aa11.35□□□□□ -0.59
LINC00343-208ENST00000599264 SRA1Q9HD15 236 aaKnown RBP11.35□□□□□ -0.59
LINC00343-208ENST00000599264 SMNDC1O75940 238 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC00343-208ENST00000599264 DNM1Q05193 864 aaKnown RBP11.34□□□□□ -0.59
LINC00343-208ENST00000599264 IGF2-ASQ6U949 168 aa11.34□□□□□ -0.59
LINC00343-208ENST00000599264 MAP4K3Q8IVH8 894 aa11.34□□□□□ -0.59
LINC00343-208ENST00000599264 EDEM1Q92611 657 aa11.34□□□□□ -0.59
LINC00343-208ENST00000599264 SEMA6BQ9H3T3 888 aa11.34□□□□□ -0.59
LINC00343-208ENST00000599264 TPSG1Q9NRR2 321 aa11.34□□□□□ -0.59
LINC00343-208ENST00000599264 MZF1P28698 734 aaPredicted RBP11.33□□□□□ -0.6
LINC00343-208ENST00000599264 EIF1AXP47813 144 aaKnown RBP11.33□□□□□ -0.6
LINC00343-208ENST00000599264 AAMPQ13685 434 aa11.33□□□□□ -0.6
LINC00343-208ENST00000599264 NCAPG2Q86XI2 1143 aa11.33□□□□□ -0.6
LINC00343-208ENST00000599264 USTQ9Y2C2 406 aa11.33□□□□□ -0.6
LINC00343-208ENST00000599264 LOC100996750A0A140TA64 210 aa11.32□□□□□ -0.6
LINC00343-208ENST00000599264 FAM13AO94988 1023 aa11.32□□□□□ -0.6
LINC00343-208ENST00000599264 MPSTP25325 297 aa11.32□□□□□ -0.6
LINC00343-208ENST00000599264 KRTAP4-6Q9BYQ5 205 aa11.32□□□□□ -0.6
LINC00343-208ENST00000599264 FAM177BA6PVY3 158 aa11.31□□□□□ -0.6
LINC00343-208ENST00000599264 SF3B2Q13435 895 aaKnown RBP11.31□□□□□ -0.6
LINC00343-208ENST00000599264 C8orf34Q49A92 452 aa11.31□□□□□ -0.6
LINC00343-208ENST00000599264 CEP135Q66GS9 1140 aa11.31□□□□□ -0.6
LINC00343-208ENST00000599264 XKR5Q6UX68 686 aa11.31□□□□□ -0.6
LINC00343-208ENST00000599264 KIF4AO95239 1232 aa11.3□□□□□ -0.6
LINC00343-208ENST00000599264 PDGFAP04085 211 aa11.3□□□□□ -0.6
LINC00343-208ENST00000599264 PMEPA1Q969W9 287 aa11.3□□□□□ -0.6
LINC00343-208ENST00000599264 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
LINC00343-208ENST00000599264 PPME1Q9Y570 386 aa11.3□□□□□ -0.6
LINC00343-208ENST00000599264 RSPO4Q2I0M5 234 aaPredicted RBP11.29□□□□□ -0.6
LINC00343-208ENST00000599264 COL13A1Q5TAT6 717 aaPredicted RBP11.29□□□□□ -0.6
LINC00343-208ENST00000599264 TMEM63CQ9P1W3 806 aa11.29□□□□□ -0.6
LINC00343-208ENST00000599264 DEAF1O75398 565 aaPredicted RBP11.28□□□□□ -0.6
LINC00343-208ENST00000599264 NPR3P17342 541 aa11.28□□□□□ -0.6
LINC00343-208ENST00000599264 CES1P23141 567 aa11.28□□□□□ -0.6
LINC00343-208ENST00000599264 USP5P45974 858 aa11.28□□□□□ -0.6
LINC00343-208ENST00000599264 FKBP4Q02790 459 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC00343-208ENST00000599264 EHHADHQ08426 723 aa11.28□□□□□ -0.6
LINC00343-208ENST00000599264 NKAPLQ5M9Q1 402 aa11.28□□□□□ -0.6
LINC00343-208ENST00000599264 DLL1O00548 723 aa11.27□□□□□ -0.61
LINC00343-208ENST00000599264 ABL1P00519 1130 aa11.27□□□□□ -0.61
LINC00343-208ENST00000599264 ATP11AP98196 1134 aa11.27□□□□□ -0.61
LINC00343-208ENST00000599264 MTMR3Q13615 1198 aa11.27□□□□□ -0.61
LINC00343-208ENST00000599264 WFDC12Q8WWY7 111 aa11.27□□□□□ -0.61
LINC00343-208ENST00000599264 PBX4Q9BYU1 374 aa11.27□□□□□ -0.61
LINC00343-208ENST00000599264 CYP2E1P05181 493 aaPredicted RBP11.26□□□□□ -0.61
LINC00343-208ENST00000599264 CDC27P30260 824 aa11.26□□□□□ -0.61
LINC00343-208ENST00000599264 PDE4CQ08493 712 aa11.26□□□□□ -0.61
LINC00343-208ENST00000599264 FAM117BQ6P1L5 589 aa11.26□□□□□ -0.61
LINC00343-208ENST00000599264 TP53INP1Q96A56 240 aa11.26□□□□□ -0.61
LINC00343-208ENST00000599264 MRPL18Q9H0U6 180 aaKnown RBP11.26□□□□□ -0.61
LINC00343-208ENST00000599264 RASSF4Q9H2L5 321 aa11.26□□□□□ -0.61
LINC00343-208ENST00000599264 GGNBP2Q9H3C7 697 aa11.26□□□□□ -0.61
LINC00343-208ENST00000599264 H2AFB1P0C5Y9 115 aa11.25□□□□□ -0.61
LINC00343-208ENST00000599264 H2AFB2P0C5Z0 115 aa11.25□□□□□ -0.61
LINC00343-208ENST00000599264 PHLDB3Q6NSJ2 640 aa11.25□□□□□ -0.61
LINC00343-208ENST00000599264 CEP120Q8N960 986 aa11.25□□□□□ -0.61
LINC00343-208ENST00000599264 ARID3AQ99856 593 aa11.25□□□□□ -0.61
LINC00343-208ENST00000599264 LACRTQ9GZZ8 138 aa11.25□□□□□ -0.61
LINC00343-208ENST00000599264 POLIQ9UNA4 740 aa11.25□□□□□ -0.61
LINC00343-208ENST00000599264 CARNS1A5YM72 827 aa11.24□□□□□ -0.61
LINC00343-208ENST00000599264 DYRK3O43781 588 aa11.24□□□□□ -0.61
LINC00343-208ENST00000599264 PTPRAP18433 802 aa11.24□□□□□ -0.61
LINC00343-208ENST00000599264 IREB2P48200 963 aaKnown RBP11.24□□□□□ -0.61
LINC00343-208ENST00000599264 CNTN3Q9P232 1028 aa11.24□□□□□ -0.61
LINC00343-208ENST00000599264 KANSL3Q9P2N6 904 aa11.24□□□□□ -0.61
LINC00343-208ENST00000599264 SHROOM4Q9ULL8 1493 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms