RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 TOM1L2Q6ZVM7 507 aa13.89□□□□□ -0.19
SMG9-207ENST00000598860 NFAT5O94916 1531 aa13.89□□□□□ -0.19
SMG9-207ENST00000598860 COL5A2P05997 1499 aaPredicted RBP13.88□□□□□ -0.19
SMG9-207ENST00000598860 GIGYF1O75420 1035 aaPredicted RBP13.88□□□□□ -0.19
SMG9-207ENST00000598860 NR3C2P08235 984 aa13.88□□□□□ -0.19
SMG9-207ENST00000598860 RAB15P59190 212 aa13.88□□□□□ -0.19
SMG9-207ENST00000598860 ABCC6O95255 1503 aa13.88□□□□□ -0.19
SMG9-207ENST00000598860 CRB1P82279 1406 aa13.88□□□□□ -0.19
SMG9-207ENST00000598860 SMG6Q86US8 1419 aaKnown RBP13.88□□□□□ -0.19
SMG9-207ENST00000598860 COL18A1P39060 1754 aa13.87□□□□□ -0.19
SMG9-207ENST00000598860 PDE3BQ13370 1112 aa13.87□□□□□ -0.19
SMG9-207ENST00000598860 INTS6LQ5JSJ4 861 aaKnown RBP13.87□□□□□ -0.19
SMG9-207ENST00000598860 WDR17Q8IZU2 1322 aa13.87□□□□□ -0.19
SMG9-207ENST00000598860 KIF24Q5T7B8 1368 aa13.86□□□□□ -0.19
SMG9-207ENST00000598860 SKIP12755 728 aa13.86□□□□□ -0.19
SMG9-207ENST00000598860 FAM182BQ5T319 152 aa13.86□□□□□ -0.19
SMG9-207ENST00000598860 Q6ZNB5 142 aa13.86□□□□□ -0.19
SMG9-207ENST00000598860 CEP126Q9P2H0 1117 aa13.86□□□□□ -0.19
SMG9-207ENST00000598860 BLMP54132 1417 aaPredicted RBP13.86□□□□□ -0.19
SMG9-207ENST00000598860 ESPNB1AK53 854 aa13.85□□□□□ -0.19
SMG9-207ENST00000598860 CCER2I3L3R5 266 aa13.85□□□□□ -0.19
SMG9-207ENST00000598860 PPP2R1AP30153 589 aa13.85□□□□□ -0.19
SMG9-207ENST00000598860 CNGB1Q14028 1251 aaPredicted RBP13.85□□□□□ -0.19
SMG9-207ENST00000598860 CCDC116Q8IYX3 515 aa13.85□□□□□ -0.19
SMG9-207ENST00000598860 CARD10Q9BWT7 1032 aa13.85□□□□□ -0.19
SMG9-207ENST00000598860 VRTNQ9H8Y1 702 aa13.85□□□□□ -0.19
SMG9-207ENST00000598860 THSD7AQ9UPZ6 1657 aa13.85□□□□□ -0.19
SMG9-207ENST00000598860 RTL1A6NKG5 1358 aa13.84□□□□□ -0.19
SMG9-207ENST00000598860 RGPD5Q99666 1765 aa13.84□□□□□ -0.19
SMG9-207ENST00000598860 USP17L3A6NCW0 530 aa13.84□□□□□ -0.19
SMG9-207ENST00000598860 USP17L4A6NCW7 530 aa13.84□□□□□ -0.19
SMG9-207ENST00000598860 USP17L5A8MUK1 530 aa13.84□□□□□ -0.19
SMG9-207ENST00000598860 USP17L2Q6R6M4 530 aa13.84□□□□□ -0.19
SMG9-207ENST00000598860 FAM196AQ6ZSG2 479 aa13.84□□□□□ -0.19
SMG9-207ENST00000598860 USP17L1Q7RTZ2 530 aa13.84□□□□□ -0.19
SMG9-207ENST00000598860 FAM208AQ9UK61 1670 aaKnown RBP13.84□□□□□ -0.19
SMG9-207ENST00000598860 PEAK1Q9H792 1746 aa13.84□□□□□ -0.19
SMG9-207ENST00000598860 CARNS1A5YM72 827 aa13.83□□□□□ -0.2
SMG9-207ENST00000598860 AVPP01185 164 aa13.83□□□□□ -0.2
SMG9-207ENST00000598860 PLEKHM2Q8IWE5 1019 aa13.83□□□□□ -0.2
SMG9-207ENST00000598860 CDCA7Q9BWT1 371 aaPredicted RBP13.83□□□□□ -0.2
SMG9-207ENST00000598860 SLFNL1Q499Z3 407 aa13.82□□□□□ -0.2
SMG9-207ENST00000598860 DEFB132Q7Z7B7 95 aa13.82□□□□□ -0.2
SMG9-207ENST00000598860 IP6K1Q92551 441 aa13.82□□□□□ -0.2
SMG9-207ENST00000598860 NLRP2Q9NX02 1062 aa13.82□□□□□ -0.2
SMG9-207ENST00000598860 FBLN1P23142 703 aa13.81□□□□□ -0.2
SMG9-207ENST00000598860 TNNT2P45379 298 aaPredicted RBP13.81□□□□□ -0.2
SMG9-207ENST00000598860 BAG6P46379 1132 aa13.81□□□□□ -0.2
SMG9-207ENST00000598860 AMPHP49418 695 aa13.81□□□□□ -0.2
SMG9-207ENST00000598860 WDR4P57081 412 aaKnown RBP13.81□□□□□ -0.2
SMG9-207ENST00000598860 DDB1Q16531 1140 aa13.81□□□□□ -0.2
SMG9-207ENST00000598860 PPP1R26Q5T8A7 1209 aaPredicted RBP13.81□□□□□ -0.2
SMG9-207ENST00000598860 ANKRD24Q8TF21 1146 aa13.81□□□□□ -0.2
SMG9-207ENST00000598860 CFAP53Q96M91 514 aa13.81□□□□□ -0.2
SMG9-207ENST00000598860 FLT4P35916 1363 aa13.81□□□□□ -0.2
SMG9-207ENST00000598860 TMEM88BA6NKF7 163 aa13.8□□□□□ -0.2
SMG9-207ENST00000598860 DHX9Q08211 1270 aaKnown RBP13.8□□□□□ -0.2
SMG9-207ENST00000598860 DEPDC4Q8N2C3 294 aa13.8□□□□□ -0.2
SMG9-207ENST00000598860 INSRP06213 1382 aa13.8□□□□□ -0.2
SMG9-207ENST00000598860 ERVH48-1M5A8F1 160 aa13.79□□□□□ -0.2
SMG9-207ENST00000598860 EXOC5O00471 708 aa13.79□□□□□ -0.2
SMG9-207ENST00000598860 TRIM37O94972 964 aa13.79□□□□□ -0.2
SMG9-207ENST00000598860 BRD1O95696 1058 aa13.79□□□□□ -0.2
SMG9-207ENST00000598860 MTHFSP49914 203 aa13.79□□□□□ -0.2
SMG9-207ENST00000598860 RNF20Q5VTR2 975 aa13.79□□□□□ -0.2
SMG9-207ENST00000598860 RNF135Q8IUD6 432 aa13.79□□□□□ -0.2
SMG9-207ENST00000598860 PHTF2Q8N3S3 785 aa13.79□□□□□ -0.2
SMG9-207ENST00000598860 LTV1Q96GA3 475 aaPredicted RBP13.79□□□□□ -0.2
SMG9-207ENST00000598860 TMPRSS4Q9NRS4 437 aa13.79□□□□□ -0.2
SMG9-207ENST00000598860 POLKQ9UBT6 870 aa13.79□□□□□ -0.2
SMG9-207ENST00000598860 EMILIN1Q9Y6C2 1016 aa13.79□□□□□ -0.2
SMG9-207ENST00000598860 MAP3K19Q56UN5 1328 aa13.79□□□□□ -0.2
SMG9-207ENST00000598860 ZIC2O95409 532 aaPredicted RBP13.78□□□□□ -0.2
SMG9-207ENST00000598860 TIMP2P16035 220 aa13.78□□□□□ -0.2
SMG9-207ENST00000598860 ITPKCQ96DU7 683 aa13.78□□□□□ -0.2
SMG9-207ENST00000598860 KLF16Q9BXK1 252 aaPredicted RBP13.78□□□□□ -0.2
SMG9-207ENST00000598860 COL3A1P02461 1466 aaPredicted RBP13.78□□□□□ -0.2
SMG9-207ENST00000598860 HOXC9P31274 260 aa13.77□□□□□ -0.21
SMG9-207ENST00000598860 RRS1Q15050 365 aaKnown RBP13.77□□□□□ -0.21
SMG9-207ENST00000598860 CTC1Q2NKJ3 1217 aa13.77□□□□□ -0.21
SMG9-207ENST00000598860 ZFAND3Q9H8U3 227 aa13.77□□□□□ -0.21
SMG9-207ENST00000598860 MRS2Q9HD23 443 aa13.77□□□□□ -0.21
SMG9-207ENST00000598860 PARP4Q9UKK3 1724 aaKnown RBP13.77□□□□□ -0.21
SMG9-207ENST00000598860 EP400Q96L91 3159 aa13.77□□□□□ -0.21
SMG9-207ENST00000598860 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
SMG9-207ENST00000598860 AXIN1O15169 862 aa13.76□□□□□ -0.21
SMG9-207ENST00000598860 CAPN5O15484 640 aaPredicted RBP13.76□□□□□ -0.21
SMG9-207ENST00000598860 APBA3O96018 575 aa13.76□□□□□ -0.21
SMG9-207ENST00000598860 KCNA1Q09470 495 aa13.76□□□□□ -0.21
SMG9-207ENST00000598860 NCOA4Q13772 614 aa13.76□□□□□ -0.21
SMG9-207ENST00000598860 ELOAQ14241 798 aaKnown RBP13.76□□□□□ -0.21
SMG9-207ENST00000598860 PLPP7Q8NBV4 271 aa13.76□□□□□ -0.21
SMG9-207ENST00000598860 PGPEP1Q9NXJ5 209 aa13.76□□□□□ -0.21
SMG9-207ENST00000598860 RGPD2P0DJD1 1756 aa13.76□□□□□ -0.21
SMG9-207ENST00000598860 PATL2C9JE40 543 aaKnown RBP13.75□□□□□ -0.21
SMG9-207ENST00000598860 ST8SIA5O15466 376 aa13.75□□□□□ -0.21
SMG9-207ENST00000598860 IL2RBP14784 551 aa13.75□□□□□ -0.21
SMG9-207ENST00000598860 SMCPP49901 116 aaPredicted RBP13.75□□□□□ -0.21
SMG9-207ENST00000598860 MARCH10Q8NA82 808 aaPredicted RBP13.75□□□□□ -0.21
SMG9-207ENST00000598860 ZMIZ1Q9ULJ6 1067 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms