RNA–Protein interactions for RNA: ENST00000598706.1

RAB11B-203, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB11B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-203ENST00000598706 C6orf229H3BNL8 230 aa18.63■□□□□ 0.57
RAB11B-203ENST00000598706 VIL1P09327 827 aaKnown RBP18.63■□□□□ 0.57
RAB11B-203ENST00000598706 SCARF1Q14162 830 aa18.63■□□□□ 0.57
RAB11B-203ENST00000598706 CFAP53Q96M91 514 aa18.63■□□□□ 0.57
RAB11B-203ENST00000598706 POLLQ9UGP5 575 aa18.63■□□□□ 0.57
RAB11B-203ENST00000598706 NUDCQ9Y266 331 aa18.63■□□□□ 0.57
RAB11B-203ENST00000598706 U2AF1L5P0DN76 240 aaPredicted RBP18.62■□□□□ 0.57
RAB11B-203ENST00000598706 U2AF1Q01081 240 aaKnown RBP eCLIP18.62■□□□□ 0.57
RAB11B-203ENST00000598706 SREBF2Q12772 1141 aa18.62■□□□□ 0.57
RAB11B-203ENST00000598706 EYA3Q99504 573 aa18.62■□□□□ 0.57
RAB11B-203ENST00000598706 R3HDMLQ9H3Y0 253 aa18.62■□□□□ 0.57
RAB11B-203ENST00000598706 ZNF609O15014 1411 aa18.62■□□□□ 0.57
RAB11B-203ENST00000598706 SH3TC1Q8TE82 1336 aa18.61■□□□□ 0.57
RAB11B-203ENST00000598706 PITPNM2Q9BZ72 1349 aa18.61■□□□□ 0.57
RAB11B-203ENST00000598706 ZNF280AP59817 542 aaPredicted RBP18.61■□□□□ 0.57
RAB11B-203ENST00000598706 MKRN3Q13064 507 aaKnown RBP18.61■□□□□ 0.57
RAB11B-203ENST00000598706 LRP10Q7Z4F1 713 aa18.61■□□□□ 0.57
RAB11B-203ENST00000598706 NLRP10Q86W26 655 aa18.61■□□□□ 0.57
RAB11B-203ENST00000598706 THUMPD2Q9BTF0 503 aaKnown RBP18.61■□□□□ 0.57
RAB11B-203ENST00000598706 COLQQ9Y215 455 aaPredicted RBP18.61■□□□□ 0.57
RAB11B-203ENST00000598706 TRIM17Q9Y577 477 aa18.61■□□□□ 0.57
RAB11B-203ENST00000598706 GPSM2P81274 684 aa18.6■□□□□ 0.57
RAB11B-203ENST00000598706 TRMT112Q9UI30 125 aaKnown RBP18.6■□□□□ 0.57
RAB11B-203ENST00000598706 COL4A1P02462 1669 aa18.6■□□□□ 0.57
RAB11B-203ENST00000598706 HSP90AB3PQ58FF7 597 aa18.59■□□□□ 0.57
RAB11B-203ENST00000598706 CELF1Q92879 486 aaKnown RBP18.59■□□□□ 0.57
RAB11B-203ENST00000598706 TTLL12Q14166 644 aaPredicted RBP18.58■□□□□ 0.56
RAB11B-203ENST00000598706 OTOP1Q7RTM1 612 aa18.58■□□□□ 0.56
RAB11B-203ENST00000598706 AGBL3Q8NEM8 1001 aa18.58■□□□□ 0.56
RAB11B-203ENST00000598706 SCAF8Q9UPN6 1271 aaKnown RBP18.58■□□□□ 0.56
RAB11B-203ENST00000598706 EN2P19622 333 aaPredicted RBP18.57■□□□□ 0.56
RAB11B-203ENST00000598706 PDIA6Q15084 440 aa18.57■□□□□ 0.56
RAB11B-203ENST00000598706 PRAMEF18Q5VWM3 479 aa18.57■□□□□ 0.56
RAB11B-203ENST00000598706 RSBN1LQ6PCB5 846 aaPredicted RBP18.57■□□□□ 0.56
RAB11B-203ENST00000598706 TBC1D16Q8TBP0 767 aa18.57■□□□□ 0.56
RAB11B-203ENST00000598706 MYOZ2Q9NPC6 264 aa18.57■□□□□ 0.56
RAB11B-203ENST00000598706 DLL1O00548 723 aa18.56■□□□□ 0.56
RAB11B-203ENST00000598706 PROSER3Q2NL68 480 aa18.56■□□□□ 0.56
RAB11B-203ENST00000598706 ZC3H12CQ9C0D7 883 aaKnown RBP18.56■□□□□ 0.56
RAB11B-203ENST00000598706 G3V3G9 751 aa18.55■□□□□ 0.56
RAB11B-203ENST00000598706 ALDH1A1P00352 501 aa18.55■□□□□ 0.56
RAB11B-203ENST00000598706 ANXA1P04083 346 aa18.55■□□□□ 0.56
RAB11B-203ENST00000598706 DCAF8Q5TAQ9 597 aa18.55■□□□□ 0.56
RAB11B-203ENST00000598706 NECTIN2Q92692 538 aa18.55■□□□□ 0.56
RAB11B-203ENST00000598706 CLSPNQ9HAW4 1339 aa18.54■□□□□ 0.56
RAB11B-203ENST00000598706 USP17L8P0C7I0 530 aa18.54■□□□□ 0.56
RAB11B-203ENST00000598706 NF2P35240 595 aa18.54■□□□□ 0.56
RAB11B-203ENST00000598706 TCIRG1Q13488 830 aa18.54■□□□□ 0.56
RAB11B-203ENST00000598706 LAMB1P07942 1786 aa18.54■□□□□ 0.56
RAB11B-203ENST00000598706 EIF2S2P20042 333 aaKnown RBP18.53■□□□□ 0.56
RAB11B-203ENST00000598706 ARMC5Q96C12 935 aa18.53■□□□□ 0.56
RAB11B-203ENST00000598706 GMLQ99445 158 aa18.53■□□□□ 0.56
RAB11B-203ENST00000598706 PTPN22Q9Y2R2 807 aa18.53■□□□□ 0.56
RAB11B-203ENST00000598706 CUL9Q8IWT3 2517 aa18.53■□□□□ 0.56
RAB11B-203ENST00000598706 PTPN12Q05209 780 aaKnown RBP18.52■□□□□ 0.56
RAB11B-203ENST00000598706 AIMP1Q12904 312 aaKnown RBP18.52■□□□□ 0.56
RAB11B-203ENST00000598706 SF3B3Q15393 1217 aaKnown RBP18.52■□□□□ 0.56
RAB11B-203ENST00000598706 COPS6Q7L5N1 327 aa18.52■□□□□ 0.56
RAB11B-203ENST00000598706 ZNF428Q96B54 188 aa18.52■□□□□ 0.56
RAB11B-203ENST00000598706 RANBP2P49792 3224 aaKnown RBP18.51■□□□□ 0.55
RAB11B-203ENST00000598706 UFL1O94874 794 aa18.51■□□□□ 0.55
RAB11B-203ENST00000598706 SPRYD7Q5W111 196 aa18.51■□□□□ 0.55
RAB11B-203ENST00000598706 XAGE3Q8WTP9 111 aa18.51■□□□□ 0.55
RAB11B-203ENST00000598706 PODXL2Q9NZ53 605 aa18.51■□□□□ 0.55
RAB11B-203ENST00000598706 A0A0C4DFX4 3053 aa18.51■□□□□ 0.55
RAB11B-203ENST00000598706 NBPF9Q3BBW0 867 aa18.5■□□□□ 0.55
RAB11B-203ENST00000598706 ARMC9Q7Z3E5 817 aa18.5■□□□□ 0.55
RAB11B-203ENST00000598706 IFNL1Q8IU54 200 aa18.5■□□□□ 0.55
RAB11B-203ENST00000598706 ERO1AQ96HE7 468 aa18.5■□□□□ 0.55
RAB11B-203ENST00000598706 NEFMP07197 916 aa18.49■□□□□ 0.55
RAB11B-203ENST00000598706 SLC17A8Q8NDX2 589 aa18.49■□□□□ 0.55
RAB11B-203ENST00000598706 OTUD5Q96G74 571 aa18.49■□□□□ 0.55
RAB11B-203ENST00000598706 TMEM106CQ9BVX2 250 aa18.49■□□□□ 0.55
RAB11B-203ENST00000598706 ANKIB1Q9P2G1 1089 aa18.49■□□□□ 0.55
RAB11B-203ENST00000598706 GGA1Q9UJY5 639 aa18.49■□□□□ 0.55
RAB11B-203ENST00000598706 COL6A3P12111 3177 aa18.48■□□□□ 0.55
RAB11B-203ENST00000598706 MANSC4A6NHS7 340 aaPredicted RBP18.48■□□□□ 0.55
RAB11B-203ENST00000598706 H0YGN5 161 aa18.48■□□□□ 0.55
RAB11B-203ENST00000598706 INHBEP58166 350 aa18.48■□□□□ 0.55
RAB11B-203ENST00000598706 RPS8P62241 208 aaKnown RBP18.48■□□□□ 0.55
RAB11B-203ENST00000598706 PRKG1Q13976 671 aa18.48■□□□□ 0.55
RAB11B-203ENST00000598706 CD99L2Q8TCZ2 262 aa18.48■□□□□ 0.55
RAB11B-203ENST00000598706 FAM89AQ96GI7 184 aa18.48■□□□□ 0.55
RAB11B-203ENST00000598706 ZNF646O15015 1829 aaPredicted RBP18.48■□□□□ 0.55
RAB11B-203ENST00000598706 USP17L3A6NCW0 530 aa18.47■□□□□ 0.55
RAB11B-203ENST00000598706 USP17L4A6NCW7 530 aa18.47■□□□□ 0.55
RAB11B-203ENST00000598706 LDLRAD1Q5T700 205 aa18.47■□□□□ 0.55
RAB11B-203ENST00000598706 USP17L1Q7RTZ2 530 aa18.47■□□□□ 0.55
RAB11B-203ENST00000598706 EFCC1Q9HA90 598 aa18.47■□□□□ 0.55
RAB11B-203ENST00000598706 TSPYL4Q9UJ04 414 aa18.47■□□□□ 0.55
RAB11B-203ENST00000598706 IGF2BP3O00425 579 aaKnown RBP eCLIP18.46■□□□□ 0.55
RAB11B-203ENST00000598706 WNT10BO00744 389 aa18.46■□□□□ 0.55
RAB11B-203ENST00000598706 CCER1Q8TC90 406 aaPredicted RBP18.46■□□□□ 0.55
RAB11B-203ENST00000598706 ZNF333Q96JL9 665 aa18.46■□□□□ 0.55
RAB11B-203ENST00000598706 CHRDL2Q6WN34 429 aa18.45■□□□□ 0.54
RAB11B-203ENST00000598706 ANGEL1Q9UNK9 670 aaKnown RBP18.45■□□□□ 0.54
RAB11B-203ENST00000598706 PPP2R1AP30153 589 aa18.44■□□□□ 0.54
RAB11B-203ENST00000598706 NFE2L2Q16236 605 aa18.44■□□□□ 0.54
RAB11B-203ENST00000598706 PODNQ7Z5L7 613 aa18.44■□□□□ 0.54
RAB11B-203ENST00000598706 ZBTB48P10074 688 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms