RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 C4BP0C0L5 1744 aa20.55■□□□□ 0.88
SHKBP1-216ENST00000598201 DEKP35659 375 aaKnown RBP20.55■□□□□ 0.88
SHKBP1-216ENST00000598201 ZNF589Q86UQ0 364 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-216ENST00000598201 ZGPATQ8N5A5 531 aaKnown RBP20.55■□□□□ 0.88
SHKBP1-216ENST00000598201 AKT1S1Q96B36 256 aa20.55■□□□□ 0.88
SHKBP1-216ENST00000598201 TMX3Q96JJ7 454 aa20.55■□□□□ 0.88
SHKBP1-216ENST00000598201 ANO8Q9HCE9 1232 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-216ENST00000598201 FAM177BA6PVY3 158 aa20.54■□□□□ 0.88
SHKBP1-216ENST00000598201 MCM4P33991 863 aa20.54■□□□□ 0.88
SHKBP1-216ENST00000598201 ZNF827Q17R98 1081 aa20.54■□□□□ 0.88
SHKBP1-216ENST00000598201 TNPO1Q92973 898 aaKnown RBP20.54■□□□□ 0.88
SHKBP1-216ENST00000598201 RIPOR2Q9Y4F9 1068 aa20.54■□□□□ 0.88
SHKBP1-216ENST00000598201 GNPATO15228 680 aa20.54■□□□□ 0.88
SHKBP1-216ENST00000598201 ADORA1P30542 326 aa20.54■□□□□ 0.88
SHKBP1-216ENST00000598201 SLC15A2Q16348 729 aa20.54■□□□□ 0.88
SHKBP1-216ENST00000598201 PRPF40BQ6NWY9 871 aaKnown RBP20.54■□□□□ 0.88
SHKBP1-216ENST00000598201 STK32BQ9NY57 414 aa20.54■□□□□ 0.88
SHKBP1-216ENST00000598201 RIC1Q4ADV7 1423 aa20.53■□□□□ 0.88
SHKBP1-216ENST00000598201 ANKRD18BA2A2Z9 1011 aa20.53■□□□□ 0.88
SHKBP1-216ENST00000598201 NECTIN1Q15223 517 aa20.53■□□□□ 0.88
SHKBP1-216ENST00000598201 NOL8Q76FK4 1167 aaKnown RBP20.53■□□□□ 0.88
SHKBP1-216ENST00000598201 MAP4K1Q92918 833 aa20.53■□□□□ 0.88
SHKBP1-216ENST00000598201 KCNB2Q92953 911 aa20.53■□□□□ 0.88
SHKBP1-216ENST00000598201 TFCP2L1Q9NZI6 479 aa20.53■□□□□ 0.88
SHKBP1-216ENST00000598201 RBM8AQ9Y5S9 174 aaKnown RBP20.53■□□□□ 0.88
SHKBP1-216ENST00000598201 MYH3P11055 1940 aa20.53■□□□□ 0.88
SHKBP1-216ENST00000598201 HCLS1P14317 486 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-216ENST00000598201 MCM2P49736 904 aa20.52■□□□□ 0.88
SHKBP1-216ENST00000598201 LDHAL6AQ6ZMR3 332 aa20.52■□□□□ 0.88
SHKBP1-216ENST00000598201 GOLIM4O00461 696 aa20.52■□□□□ 0.87
SHKBP1-216ENST00000598201 KBTBD3Q8NAB2 608 aa20.52■□□□□ 0.87
SHKBP1-216ENST00000598201 RTCBQ9Y3I0 505 aaKnown RBP20.52■□□□□ 0.87
SHKBP1-216ENST00000598201 RFX7Q2KHR2 1363 aa20.51■□□□□ 0.87
SHKBP1-216ENST00000598201 SH3TC1Q8TE82 1336 aa20.51■□□□□ 0.87
SHKBP1-216ENST00000598201 RPS6KA4O75676 772 aa20.51■□□□□ 0.87
SHKBP1-216ENST00000598201 ADCK5Q3MIX3 580 aa20.51■□□□□ 0.87
SHKBP1-216ENST00000598201 XAGE2Q96GT9 111 aa20.51■□□□□ 0.87
SHKBP1-216ENST00000598201 UTP14AQ9BVJ6 771 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-216ENST00000598201 PAG1Q9NWQ8 432 aa20.51■□□□□ 0.87
SHKBP1-216ENST00000598201 AKAP2Q9Y2D5 859 aa20.51■□□□□ 0.87
SHKBP1-216ENST00000598201 IFIT1P09914 478 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-216ENST00000598201 SSFA2P28290 1259 aa20.5■□□□□ 0.87
SHKBP1-216ENST00000598201 SMIM5Q71RC9 77 aa20.5■□□□□ 0.87
SHKBP1-216ENST00000598201 TTC14Q96N46 770 aa20.5■□□□□ 0.87
SHKBP1-216ENST00000598201 SEC62Q99442 399 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-216ENST00000598201 NIP7Q9Y221 180 aaKnown RBP eCLIP20.5■□□□□ 0.87
SHKBP1-216ENST00000598201 CPA1P15085 419 aa20.5■□□□□ 0.87
SHKBP1-216ENST00000598201 METTL24Q5JXM2 366 aa20.5■□□□□ 0.87
SHKBP1-216ENST00000598201 TAF5LO75529 589 aa20.49■□□□□ 0.87
SHKBP1-216ENST00000598201 SLFNL1Q499Z3 407 aa20.49■□□□□ 0.87
SHKBP1-216ENST00000598201 PARP10Q53GL7 1025 aa20.49■□□□□ 0.87
SHKBP1-216ENST00000598201 CREB3L3Q68CJ9 461 aa20.49■□□□□ 0.87
SHKBP1-216ENST00000598201 AMIGO3Q86WK7 504 aa20.49■□□□□ 0.87
SHKBP1-216ENST00000598201 CNNM1Q9NRU3 951 aa20.49■□□□□ 0.87
SHKBP1-216ENST00000598201 NTSR2O95665 410 aa20.49■□□□□ 0.87
SHKBP1-216ENST00000598201 CUL4AQ13619 759 aa20.49■□□□□ 0.87
SHKBP1-216ENST00000598201 CCDC129Q6ZRS4 1044 aa20.49■□□□□ 0.87
SHKBP1-216ENST00000598201 PHF14O94880 888 aa20.48■□□□□ 0.87
SHKBP1-216ENST00000598201 CASTP20810 708 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-216ENST00000598201 KCNJ4P48050 445 aa20.48■□□□□ 0.87
SHKBP1-216ENST00000598201 PKP1Q13835 747 aa20.48■□□□□ 0.87
SHKBP1-216ENST00000598201 VGLL2Q8N8G2 317 aa20.48■□□□□ 0.87
SHKBP1-216ENST00000598201 CWC22Q9HCG8 908 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-216ENST00000598201 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.47■□□□□ 0.87
SHKBP1-216ENST00000598201 SLC27A2O14975 620 aa20.47■□□□□ 0.87
SHKBP1-216ENST00000598201 ATP2B3Q16720 1220 aa20.47■□□□□ 0.87
SHKBP1-216ENST00000598201 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.47■□□□□ 0.87
SHKBP1-216ENST00000598201 JAKMIP1Q96N16 626 aaKnown RBP20.47■□□□□ 0.87
SHKBP1-216ENST00000598201 SCARF1Q14162 830 aa20.47■□□□□ 0.87
SHKBP1-216ENST00000598201 CCDC158Q5M9N0 1113 aa20.47■□□□□ 0.87
SHKBP1-216ENST00000598201 TTC39AQ5SRH9 613 aa20.47■□□□□ 0.87
SHKBP1-216ENST00000598201 TRAPPC3LQ5T215 181 aa20.47■□□□□ 0.87
SHKBP1-216ENST00000598201 GORABQ5T7V8 394 aa20.47■□□□□ 0.87
SHKBP1-216ENST00000598201 TAF6LQ9Y6J9 622 aa20.47■□□□□ 0.87
SHKBP1-216ENST00000598201 AK2P54819 239 aa20.46■□□□□ 0.87
SHKBP1-216ENST00000598201 COL9A3Q14050 684 aaPredicted RBP20.46■□□□□ 0.87
SHKBP1-216ENST00000598201 MCMDC2Q4G0Z9 681 aa20.46■□□□□ 0.87
SHKBP1-216ENST00000598201 UBR3Q6ZT12 1888 aa20.46■□□□□ 0.87
SHKBP1-216ENST00000598201 CYP2E1P05181 493 aaPredicted RBP20.46■□□□□ 0.87
SHKBP1-216ENST00000598201 FLAD1Q8NFF5 587 aa20.46■□□□□ 0.87
SHKBP1-216ENST00000598201 ARHGEF1Q92888 912 aaKnown RBP20.46■□□□□ 0.87
SHKBP1-216ENST00000598201 ZSWIM6Q9HCJ5 1215 aa20.46■□□□□ 0.87
SHKBP1-216ENST00000598201 SEC31BQ9NQW1 1179 aa20.46■□□□□ 0.87
SHKBP1-216ENST00000598201 BCORQ6W2J9 1755 aa20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 LRP5O75197 1615 aa20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 ZKSCAN1P17029 563 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 ADRA2BP18089 450 aa20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 FKBP4Q02790 459 aaKnown RBP eCLIP20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 R3HDM1Q15032 1099 aaKnown RBP20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 RUFY3Q7L099 469 aa20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 IL27Q8NEV9 243 aa20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 LARP6Q9BRS8 491 aaKnown RBP20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 TM6SF1Q9BZW5 370 aa20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 ZNF652Q9Y2D9 606 aa20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 DDX60Q8IY21 1712 aaKnown RBP20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 PNPLA7Q6ZV29 1317 aa20.45■□□□□ 0.86
SHKBP1-216ENST00000598201 GSE1Q14687 1217 aa20.44■□□□□ 0.86
SHKBP1-216ENST00000598201 CLEC4GQ6UXB4 293 aa20.44■□□□□ 0.86
SHKBP1-216ENST00000598201 PDE8BO95263 885 aa20.44■□□□□ 0.86
SHKBP1-216ENST00000598201 USPL1Q5W0Q7 1092 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms