RNA–Protein interactions for RNA: ENST00000596899.1

ZNF43-208, Transcript of zinc finger protein 43, humanhuman

TSL 3

Gene ZNF43, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF43-208ENST00000596899 C6orf229H3BNL8 230 aa17.31■□□□□ 0.36
ZNF43-208ENST00000596899 TAF7Q15545 349 aaPredicted RBP17.31■□□□□ 0.36
ZNF43-208ENST00000596899 SCAF8Q9UPN6 1271 aaKnown RBP17.31■□□□□ 0.36
ZNF43-208ENST00000596899 POLLQ9UGP5 575 aa17.3■□□□□ 0.36
ZNF43-208ENST00000596899 PITPNM2Q9BZ72 1349 aa17.29■□□□□ 0.36
ZNF43-208ENST00000596899 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
ZNF43-208ENST00000596899 OTUD5Q96G74 571 aa17.29■□□□□ 0.36
ZNF43-208ENST00000596899 EYA3Q99504 573 aa17.29■□□□□ 0.36
ZNF43-208ENST00000596899 PTPN22Q9Y2R2 807 aa17.29■□□□□ 0.36
ZNF43-208ENST00000596899 DLG5Q8TDM6 1919 aa17.28■□□□□ 0.36
ZNF43-208ENST00000596899 H0YGN5 161 aa17.28■□□□□ 0.36
ZNF43-208ENST00000596899 ZNF280AP59817 542 aaPredicted RBP17.28■□□□□ 0.36
ZNF43-208ENST00000596899 PRAMEF18Q5VWM3 479 aa17.28■□□□□ 0.36
ZNF43-208ENST00000596899 ARMC5Q96C12 935 aa17.28■□□□□ 0.36
ZNF43-208ENST00000596899 COL4A1P02462 1669 aa17.27■□□□□ 0.36
ZNF43-208ENST00000596899 ALDH1A1P00352 501 aa17.27■□□□□ 0.36
ZNF43-208ENST00000596899 GPSM2P81274 684 aa17.27■□□□□ 0.36
ZNF43-208ENST00000596899 TCIRG1Q13488 830 aa17.27■□□□□ 0.36
ZNF43-208ENST00000596899 ZNF609O15014 1411 aa17.27■□□□□ 0.35
ZNF43-208ENST00000596899 LAMB1P07942 1786 aa17.27■□□□□ 0.35
ZNF43-208ENST00000596899 CEP290O15078 2479 aa17.26■□□□□ 0.35
ZNF43-208ENST00000596899 HTATSF1O43719 755 aaKnown RBP17.26■□□□□ 0.35
ZNF43-208ENST00000596899 CHRDL2Q6WN34 429 aa17.26■□□□□ 0.35
ZNF43-208ENST00000596899 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
ZNF43-208ENST00000596899 TMEM106CQ9BVX2 250 aa17.26■□□□□ 0.35
ZNF43-208ENST00000596899 MYOZ2Q9NPC6 264 aa17.26■□□□□ 0.35
ZNF43-208ENST00000596899 SH3TC1Q8TE82 1336 aa17.25■□□□□ 0.35
ZNF43-208ENST00000596899 G3V3G9 751 aa17.25■□□□□ 0.35
ZNF43-208ENST00000596899 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
ZNF43-208ENST00000596899 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
ZNF43-208ENST00000596899 DCAF8Q5TAQ9 597 aa17.25■□□□□ 0.35
ZNF43-208ENST00000596899 RSBN1LQ6PCB5 846 aaPredicted RBP17.25■□□□□ 0.35
ZNF43-208ENST00000596899 NLRP10Q86W26 655 aa17.25■□□□□ 0.35
ZNF43-208ENST00000596899 AGBL3Q8NEM8 1001 aa17.25■□□□□ 0.35
ZNF43-208ENST00000596899 CELF1Q92879 486 aaKnown RBP17.25■□□□□ 0.35
ZNF43-208ENST00000596899 TRMT112Q9UI30 125 aaKnown RBP17.25■□□□□ 0.35
ZNF43-208ENST00000596899 ERBB4Q15303 1308 aa17.24■□□□□ 0.35
ZNF43-208ENST00000596899 NF2P35240 595 aa17.24■□□□□ 0.35
ZNF43-208ENST00000596899 TBC1D16Q8TBP0 767 aa17.24■□□□□ 0.35
ZNF43-208ENST00000596899 CD99L2Q8TCZ2 262 aa17.24■□□□□ 0.35
ZNF43-208ENST00000596899 PNISRQ8TF01 805 aaKnown RBP17.24■□□□□ 0.35
ZNF43-208ENST00000596899 ERO1AQ96HE7 468 aa17.24■□□□□ 0.35
ZNF43-208ENST00000596899 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
ZNF43-208ENST00000596899 TIMELESSQ9UNS1 1208 aa17.24■□□□□ 0.35
ZNF43-208ENST00000596899 USP17L8P0C7I0 530 aa17.23■□□□□ 0.35
ZNF43-208ENST00000596899 PTPN12Q05209 780 aaKnown RBP17.23■□□□□ 0.35
ZNF43-208ENST00000596899 SPRYD7Q5W111 196 aa17.23■□□□□ 0.35
ZNF43-208ENST00000596899 IFNL1Q8IU54 200 aa17.23■□□□□ 0.35
ZNF43-208ENST00000596899 COL6A3P12111 3177 aa17.23■□□□□ 0.35
ZNF43-208ENST00000596899 PER1O15534 1290 aaPredicted RBP17.22■□□□□ 0.35
ZNF43-208ENST00000596899 PRKG1Q13976 671 aa17.22■□□□□ 0.35
ZNF43-208ENST00000596899 HSP90AB3PQ58FF7 597 aa17.22■□□□□ 0.35
ZNF43-208ENST00000596899 EFCC1Q9HA90 598 aa17.22■□□□□ 0.35
ZNF43-208ENST00000596899 RBM27Q9P2N5 1060 aaKnown RBP17.22■□□□□ 0.35
ZNF43-208ENST00000596899 MANSC4A6NHS7 340 aaPredicted RBP17.21■□□□□ 0.35
ZNF43-208ENST00000596899 U2AF1L5P0DN76 240 aaPredicted RBP17.21■□□□□ 0.35
ZNF43-208ENST00000596899 U2AF1Q01081 240 aaKnown RBP eCLIP17.21■□□□□ 0.35
ZNF43-208ENST00000596899 ARMC9Q7Z3E5 817 aa17.21■□□□□ 0.35
ZNF43-208ENST00000596899 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
ZNF43-208ENST00000596899 ZNF428Q96B54 188 aa17.21■□□□□ 0.35
ZNF43-208ENST00000596899 ZNF333Q96JL9 665 aa17.21■□□□□ 0.35
ZNF43-208ENST00000596899 NBPF9Q3BBW0 867 aa17.2■□□□□ 0.34
ZNF43-208ENST00000596899 NECTIN2Q92692 538 aa17.2■□□□□ 0.34
ZNF43-208ENST00000596899 CFAP53Q96M91 514 aa17.2■□□□□ 0.34
ZNF43-208ENST00000596899 IGF2BP3O00425 579 aaKnown RBP eCLIP17.19■□□□□ 0.34
ZNF43-208ENST00000596899 UFL1O94874 794 aa17.19■□□□□ 0.34
ZNF43-208ENST00000596899 ANXA1P04083 346 aa17.19■□□□□ 0.34
ZNF43-208ENST00000596899 INHBEP58166 350 aa17.19■□□□□ 0.34
ZNF43-208ENST00000596899 PROSER3Q2NL68 480 aa17.19■□□□□ 0.34
ZNF43-208ENST00000596899 SLC4A8Q2Y0W8 1093 aa17.19■□□□□ 0.34
ZNF43-208ENST00000596899 GMLQ99445 158 aa17.19■□□□□ 0.34
ZNF43-208ENST00000596899 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.19■□□□□ 0.34
ZNF43-208ENST00000596899 NUDCQ9Y266 331 aa17.19■□□□□ 0.34
ZNF43-208ENST00000596899 RANBP2P49792 3224 aaKnown RBP17.18■□□□□ 0.34
ZNF43-208ENST00000596899 PDIA6Q15084 440 aa17.18■□□□□ 0.34
ZNF43-208ENST00000596899 ZNF646O15015 1829 aaPredicted RBP17.18■□□□□ 0.34
ZNF43-208ENST00000596899 CUL9Q8IWT3 2517 aa17.17■□□□□ 0.34
ZNF43-208ENST00000596899 A0A0C4DFX4 3053 aa17.17■□□□□ 0.34
ZNF43-208ENST00000596899 EIF2S2P20042 333 aaKnown RBP17.17■□□□□ 0.34
ZNF43-208ENST00000596899 AIMP1Q12904 312 aaKnown RBP17.17■□□□□ 0.34
ZNF43-208ENST00000596899 CRHR2Q13324 411 aa17.17■□□□□ 0.34
ZNF43-208ENST00000596899 SF3B3Q15393 1217 aaKnown RBP17.17■□□□□ 0.34
ZNF43-208ENST00000596899 SLC9C1Q4G0N8 1177 aa17.17■□□□□ 0.34
ZNF43-208ENST00000596899 LDLRAD1Q5T700 205 aa17.17■□□□□ 0.34
ZNF43-208ENST00000596899 ANGEL1Q9UNK9 670 aaKnown RBP17.17■□□□□ 0.34
ZNF43-208ENST00000596899 MYCP01106 439 aaPredicted RBP17.16■□□□□ 0.34
ZNF43-208ENST00000596899 MNX1P50219 401 aaPredicted RBP17.16■□□□□ 0.34
ZNF43-208ENST00000596899 CAP1Q01518 475 aa17.16■□□□□ 0.34
ZNF43-208ENST00000596899 NBPF11Q86T75 865 aa17.16■□□□□ 0.34
ZNF43-208ENST00000596899 PODXL2Q9NZ53 605 aa17.16■□□□□ 0.34
ZNF43-208ENST00000596899 ANKIB1Q9P2G1 1089 aa17.16■□□□□ 0.34
ZNF43-208ENST00000596899 FZD1Q9UP38 647 aa17.16■□□□□ 0.34
ZNF43-208ENST00000596899 ZBTB48P10074 688 aaPredicted RBP17.15■□□□□ 0.34
ZNF43-208ENST00000596899 SP3Q02447 781 aa17.15■□□□□ 0.34
ZNF43-208ENST00000596899 COPS6Q7L5N1 327 aa17.15■□□□□ 0.34
ZNF43-208ENST00000596899 GGA1Q9UJY5 639 aa17.15■□□□□ 0.34
ZNF43-208ENST00000596899 PTCH2Q9Y6C5 1203 aa17.15■□□□□ 0.34
ZNF43-208ENST00000596899 USP17L3A6NCW0 530 aa17.14■□□□□ 0.33
ZNF43-208ENST00000596899 USP17L4A6NCW7 530 aa17.14■□□□□ 0.33
ZNF43-208ENST00000596899 WNT10BO00744 389 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms