RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 CCDC39Q9UFE4 941 aa27.3■■□□□ 1.96
SPTBN4-209ENST00000596411 LAMA4Q16363 1823 aa27.29■■□□□ 1.96
SPTBN4-209ENST00000596411 PCCAP05165 728 aaPredicted RBP27.28■■□□□ 1.96
SPTBN4-209ENST00000596411 FUCA2Q9BTY2 467 aa27.28■■□□□ 1.96
SPTBN4-209ENST00000596411 PLCH1Q4KWH8 1693 aa27.28■■□□□ 1.96
SPTBN4-209ENST00000596411 ZNF500O60304 480 aaPredicted RBP27.27■■□□□ 1.96
SPTBN4-209ENST00000596411 CDC37L1Q7L3B6 337 aa27.27■■□□□ 1.96
SPTBN4-209ENST00000596411 LLPHQ9BRT6 129 aaKnown RBP27.27■■□□□ 1.96
SPTBN4-209ENST00000596411 AGXT2Q9BYV1 514 aa27.27■■□□□ 1.96
SPTBN4-209ENST00000596411 ANO8Q9HCE9 1232 aaPredicted RBP27.27■■□□□ 1.96
SPTBN4-209ENST00000596411 DISP2A7MBM2 1401 aa27.27■■□□□ 1.96
SPTBN4-209ENST00000596411 SEC62Q99442 399 aaKnown RBP27.27■■□□□ 1.96
SPTBN4-209ENST00000596411 A0A1B0GUL7 405 aa27.26■■□□□ 1.95
SPTBN4-209ENST00000596411 LRRFIP1Q32MZ4 808 aaKnown RBP27.26■■□□□ 1.95
SPTBN4-209ENST00000596411 LRRC24Q50LG9 513 aa27.26■■□□□ 1.95
SPTBN4-209ENST00000596411 CCDC129Q6ZRS4 1044 aa27.26■■□□□ 1.95
SPTBN4-209ENST00000596411 NEUROD6Q96NK8 337 aa27.26■■□□□ 1.95
SPTBN4-209ENST00000596411 SCAND2PQ9GZW5 306 aaPredicted RBP27.26■■□□□ 1.95
SPTBN4-209ENST00000596411 AKAP2Q9Y2D5 859 aa27.26■■□□□ 1.95
SPTBN4-209ENST00000596411 NDUFB9Q9Y6M9 179 aa27.26■■□□□ 1.95
SPTBN4-209ENST00000596411 ITGB4P16144 1822 aa27.25■■□□□ 1.95
SPTBN4-209ENST00000596411 GOLIM4O00461 696 aa27.25■■□□□ 1.95
SPTBN4-209ENST00000596411 TCEANC2Q96MN5 208 aa27.25■■□□□ 1.95
SPTBN4-209ENST00000596411 ZKSCAN5Q9Y2L8 839 aa27.25■■□□□ 1.95
SPTBN4-209ENST00000596411 CDHR2Q9BYE9 1310 aa27.25■■□□□ 1.95
SPTBN4-209ENST00000596411 CSF1RP07333 972 aa27.25■■□□□ 1.95
SPTBN4-209ENST00000596411 IFIT1P09914 478 aaKnown RBP27.25■■□□□ 1.95
SPTBN4-209ENST00000596411 EVA1CP58658 441 aa27.25■■□□□ 1.95
SPTBN4-209ENST00000596411 CEP126Q9P2H0 1117 aa27.25■■□□□ 1.95
SPTBN4-209ENST00000596411 ANKRD36CQ5JPF3 1778 aa27.25■■□□□ 1.95
SPTBN4-209ENST00000596411 RNF113AO15541 343 aaKnown RBP27.24■■□□□ 1.95
SPTBN4-209ENST00000596411 TIMM10P62072 90 aa27.24■■□□□ 1.95
SPTBN4-209ENST00000596411 Q6ZUG5 572 aa27.24■■□□□ 1.95
SPTBN4-209ENST00000596411 DHX32Q7L7V1 743 aaKnown RBP27.24■■□□□ 1.95
SPTBN4-209ENST00000596411 RNF214Q8ND24 703 aa27.24■■□□□ 1.95
SPTBN4-209ENST00000596411 SMARCC2Q8TAQ2 1214 aa27.24■■□□□ 1.95
SPTBN4-209ENST00000596411 KIF6Q6ZMV9 814 aa27.23■■□□□ 1.95
SPTBN4-209ENST00000596411 FBXL16Q8N461 479 aa27.23■■□□□ 1.95
SPTBN4-209ENST00000596411 COL14A1Q05707 1796 aaKnown RBP27.23■■□□□ 1.95
SPTBN4-209ENST00000596411 PFKFB2O60825 505 aa27.23■■□□□ 1.95
SPTBN4-209ENST00000596411 CCDC57Q2TAC2 916 aa27.23■■□□□ 1.95
SPTBN4-209ENST00000596411 TTC6Q86TZ1 520 aa27.23■■□□□ 1.95
SPTBN4-209ENST00000596411 ZBTB38Q8NAP3 1195 aaPredicted RBP27.23■■□□□ 1.95
SPTBN4-209ENST00000596411 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.23■■□□□ 1.95
SPTBN4-209ENST00000596411 ZNF335Q9H4Z2 1342 aaPredicted RBP27.22■■□□□ 1.95
SPTBN4-209ENST00000596411 EXOSC10Q01780 885 aaKnown RBP27.22■■□□□ 1.95
SPTBN4-209ENST00000596411 STOX1Q6ZVD7 989 aa27.22■■□□□ 1.95
SPTBN4-209ENST00000596411 CHMP4CQ96CF2 233 aa27.22■■□□□ 1.95
SPTBN4-209ENST00000596411 STRN4Q9NRL3 753 aa27.22■■□□□ 1.95
SPTBN4-209ENST00000596411 MAST3O60307 1309 aa27.21■■□□□ 1.95
SPTBN4-209ENST00000596411 ZFYP08048 801 aaPredicted RBP27.21■■□□□ 1.95
SPTBN4-209ENST00000596411 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.21■■□□□ 1.95
SPTBN4-209ENST00000596411 MAP3K15Q6ZN16 1313 aa27.21■■□□□ 1.95
SPTBN4-209ENST00000596411 OFD1O75665 1012 aa27.21■■□□□ 1.95
SPTBN4-209ENST00000596411 STARD3NLO95772 234 aa27.21■■□□□ 1.95
SPTBN4-209ENST00000596411 CHGBP05060 677 aa27.21■■□□□ 1.95
SPTBN4-209ENST00000596411 ZNF594Q96JF6 807 aaPredicted RBP27.21■■□□□ 1.95
SPTBN4-209ENST00000596411 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.21■■□□□ 1.95
SPTBN4-209ENST00000596411 HSPD1P10809 573 aaKnown RBP27.2■■□□□ 1.94
SPTBN4-209ENST00000596411 ZSCAN16Q9H4T2 348 aaPredicted RBP27.2■■□□□ 1.94
SPTBN4-209ENST00000596411 HSP90AB3PQ58FF7 597 aa27.19■■□□□ 1.94
SPTBN4-209ENST00000596411 CCDC158Q5M9N0 1113 aa27.19■■□□□ 1.94
SPTBN4-209ENST00000596411 GIGYF2Q6Y7W6 1299 aaKnown RBP27.19■■□□□ 1.94
SPTBN4-209ENST00000596411 PIGBQ92521 554 aa27.19■■□□□ 1.94
SPTBN4-209ENST00000596411 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.19■■□□□ 1.94
SPTBN4-209ENST00000596411 PUS3Q9BZE2 481 aaKnown RBP27.19■■□□□ 1.94
SPTBN4-209ENST00000596411 BCL9O00512 1426 aa27.18■■□□□ 1.94
SPTBN4-209ENST00000596411 HMGN5P82970 282 aaKnown RBP27.18■■□□□ 1.94
SPTBN4-209ENST00000596411 RESTQ13127 1097 aa27.18■■□□□ 1.94
SPTBN4-209ENST00000596411 DNAJC10Q8IXB1 793 aa27.18■■□□□ 1.94
SPTBN4-209ENST00000596411 NAP1L5Q96NT1 182 aaPredicted RBP27.18■■□□□ 1.94
SPTBN4-209ENST00000596411 TERF1P54274 439 aa27.17■■□□□ 1.94
SPTBN4-209ENST00000596411 KIF3AQ9Y496 699 aa27.17■■□□□ 1.94
SPTBN4-209ENST00000596411 RIC1Q4ADV7 1423 aa27.17■■□□□ 1.94
SPTBN4-209ENST00000596411 WNK3Q9BYP7 1800 aa27.17■■□□□ 1.94
SPTBN4-209ENST00000596411 MYH15Q9Y2K3 1946 aa27.17■■□□□ 1.94
SPTBN4-209ENST00000596411 STK3Q13188 491 aa27.17■■□□□ 1.94
SPTBN4-209ENST00000596411 NAA16Q6N069 864 aaPredicted RBP27.17■■□□□ 1.94
SPTBN4-209ENST00000596411 BRF1Q92994 677 aa27.17■■□□□ 1.94
SPTBN4-209ENST00000596411 MYH3P11055 1940 aa27.16■■□□□ 1.94
SPTBN4-209ENST00000596411 SCRN1Q12765 414 aa27.16■■□□□ 1.94
SPTBN4-209ENST00000596411 ASAP1Q9ULH1 1129 aa27.16■■□□□ 1.94
SPTBN4-209ENST00000596411 MYH7P12883 1935 aa27.16■■□□□ 1.94
SPTBN4-209ENST00000596411 HSP90B1P14625 803 aaKnown RBP27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 EVCP57679 992 aa27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 LEO1Q8WVC0 666 aaPredicted RBP27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 ZNF274Q96GC6 653 aaPredicted RBP27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 XAGE2Q96GT9 111 aa27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 ZNF512BQ96KM6 892 aaPredicted RBP27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 DDX19AQ9NUU7 478 aaKnown RBP27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 CTNNA3Q9UI47 895 aa27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 LRP5O75197 1615 aa27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 COL22A1Q8NFW1 1626 aaPredicted RBP27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 DDX60Q8IY21 1712 aaKnown RBP27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 E7EWF7 191 aa27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 JAK2O60674 1132 aa27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 HCLS1P14317 486 aaPredicted RBP27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 IFIT5Q13325 482 aaKnown RBP27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 RBM43Q6ZSC3 357 aaKnown RBP27.15■■□□□ 1.94
SPTBN4-209ENST00000596411 FERMT3Q86UX7 667 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms