RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 ZNF316A6NFI3 1004 aaPredicted RBP13.57□□□□□ -0.24
NOTCH3-203ENST00000595514 PRKAR2BP31323 418 aa13.57□□□□□ -0.24
NOTCH3-203ENST00000595514 TCIRG1Q13488 830 aa13.57□□□□□ -0.24
NOTCH3-203ENST00000595514 EYA3Q99504 573 aa13.57□□□□□ -0.24
NOTCH3-203ENST00000595514 PTPN22Q9Y2R2 807 aa13.57□□□□□ -0.24
NOTCH3-203ENST00000595514 DUOX1Q9NRD9 1551 aa13.57□□□□□ -0.24
NOTCH3-203ENST00000595514 NUP98P52948 1817 aa13.57□□□□□ -0.24
NOTCH3-203ENST00000595514 VIL1P09327 827 aaKnown RBP13.56□□□□□ -0.24
NOTCH3-203ENST00000595514 HCLS1P14317 486 aaPredicted RBP13.56□□□□□ -0.24
NOTCH3-203ENST00000595514 NF2P35240 595 aa13.56□□□□□ -0.24
NOTCH3-203ENST00000595514 CNGB1Q14028 1251 aaPredicted RBP13.56□□□□□ -0.24
NOTCH3-203ENST00000595514 ERO1AQ96HE7 468 aa13.56□□□□□ -0.24
NOTCH3-203ENST00000595514 PITPNM2Q9BZ72 1349 aa13.56□□□□□ -0.24
NOTCH3-203ENST00000595514 ZNF280AP59817 542 aaPredicted RBP13.55□□□□□ -0.24
NOTCH3-203ENST00000595514 RBBP6Q7Z6E9 1792 aaKnown RBP13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 G3V3G9 751 aa13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 DCTN1Q14203 1278 aa13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 TAF7Q15545 349 aaPredicted RBP13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 DCAF8Q5TAQ9 597 aa13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 PRAMEF18Q5VWM3 479 aa13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 EFCC1Q9HA90 598 aa13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 MIS18AQ9NYP9 233 aa13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 RBM27Q9P2N5 1060 aaKnown RBP13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 POLLQ9UGP5 575 aa13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 SCAF8Q9UPN6 1271 aaKnown RBP13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 COL3A1P02461 1466 aaPredicted RBP13.54□□□□□ -0.24
NOTCH3-203ENST00000595514 DDX10Q13206 875 aaKnown RBP13.53□□□□□ -0.24
NOTCH3-203ENST00000595514 SLC4A8Q2Y0W8 1093 aa13.53□□□□□ -0.24
NOTCH3-203ENST00000595514 ARMC9Q7Z3E5 817 aa13.53□□□□□ -0.24
NOTCH3-203ENST00000595514 AGBL3Q8NEM8 1001 aa13.53□□□□□ -0.24
NOTCH3-203ENST00000595514 NECTIN2Q92692 538 aa13.53□□□□□ -0.24
NOTCH3-203ENST00000595514 ZC3H12CQ9C0D7 883 aaKnown RBP13.53□□□□□ -0.24
NOTCH3-203ENST00000595514 MYOZ2Q9NPC6 264 aa13.53□□□□□ -0.24
NOTCH3-203ENST00000595514 MANSC4A6NHS7 340 aaPredicted RBP13.52□□□□□ -0.25
NOTCH3-203ENST00000595514 INHBEP58166 350 aa13.52□□□□□ -0.25
NOTCH3-203ENST00000595514 GPSM2P81274 684 aa13.52□□□□□ -0.25
NOTCH3-203ENST00000595514 PTPN12Q05209 780 aaKnown RBP13.52□□□□□ -0.25
NOTCH3-203ENST00000595514 SPRYD7Q5W111 196 aa13.52□□□□□ -0.25
NOTCH3-203ENST00000595514 RSBN1LQ6PCB5 846 aaPredicted RBP13.52□□□□□ -0.25
NOTCH3-203ENST00000595514 IFNL1Q8IU54 200 aa13.52□□□□□ -0.25
NOTCH3-203ENST00000595514 CD99L2Q8TCZ2 262 aa13.52□□□□□ -0.25
NOTCH3-203ENST00000595514 ZNF333Q96JL9 665 aa13.52□□□□□ -0.25
NOTCH3-203ENST00000595514 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.25
NOTCH3-203ENST00000595514 LAMB4A4D0S4 1761 aa13.52□□□□□ -0.25
NOTCH3-203ENST00000595514 ZNF609O15014 1411 aa13.51□□□□□ -0.25
NOTCH3-203ENST00000595514 SH3TC1Q8TE82 1336 aa13.51□□□□□ -0.25
NOTCH3-203ENST00000595514 HTATSF1O43719 755 aaKnown RBP13.51□□□□□ -0.25
NOTCH3-203ENST00000595514 USP17L8P0C7I0 530 aa13.51□□□□□ -0.25
NOTCH3-203ENST00000595514 NBPF11Q86T75 865 aa13.51□□□□□ -0.25
NOTCH3-203ENST00000595514 TBC1D16Q8TBP0 767 aa13.51□□□□□ -0.25
NOTCH3-203ENST00000595514 PNISRQ8TF01 805 aaKnown RBP13.51□□□□□ -0.25
NOTCH3-203ENST00000595514 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
NOTCH3-203ENST00000595514 ERBB4Q15303 1308 aa13.5□□□□□ -0.25
NOTCH3-203ENST00000595514 PRKG1Q13976 671 aa13.5□□□□□ -0.25
NOTCH3-203ENST00000595514 SLC9C1Q4G0N8 1177 aa13.5□□□□□ -0.25
NOTCH3-203ENST00000595514 HSP90AB3PQ58FF7 597 aa13.5□□□□□ -0.25
NOTCH3-203ENST00000595514 NLRP10Q86W26 655 aa13.5□□□□□ -0.25
NOTCH3-203ENST00000595514 CELF1Q92879 486 aaKnown RBP13.5□□□□□ -0.25
NOTCH3-203ENST00000595514 DPF3Q92784 378 aa13.49□□□□□ -0.25
NOTCH3-203ENST00000595514 LRRC37AA6NMS7 1700 aa13.48□□□□□ -0.25
NOTCH3-203ENST00000595514 IGF2BP3O00425 579 aaKnown RBP eCLIP13.48□□□□□ -0.25
NOTCH3-203ENST00000595514 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
NOTCH3-203ENST00000595514 SP3Q02447 781 aa13.48□□□□□ -0.25
NOTCH3-203ENST00000595514 OTUD7BQ6GQQ9 843 aa13.48□□□□□ -0.25
NOTCH3-203ENST00000595514 CFAP53Q96M91 514 aa13.48□□□□□ -0.25
NOTCH3-203ENST00000595514 ANKRD36CQ5JPF3 1778 aa13.48□□□□□ -0.25
NOTCH3-203ENST00000595514 LAMA3Q16787 3333 aa13.47□□□□□ -0.25
NOTCH3-203ENST00000595514 DDX60Q8IY21 1712 aaKnown RBP13.47□□□□□ -0.25
NOTCH3-203ENST00000595514 MYCP01106 439 aaPredicted RBP13.47□□□□□ -0.25
NOTCH3-203ENST00000595514 CRHR2Q13324 411 aa13.47□□□□□ -0.25
NOTCH3-203ENST00000595514 ARHGEF6Q15052 776 aa13.47□□□□□ -0.25
NOTCH3-203ENST00000595514 NBPF9Q3BBW0 867 aa13.47□□□□□ -0.25
NOTCH3-203ENST00000595514 LDLRAD1Q5T700 205 aa13.47□□□□□ -0.25
NOTCH3-203ENST00000595514 SLC10A4Q96EP9 437 aa13.47□□□□□ -0.25
NOTCH3-203ENST00000595514 THUMPD2Q9BTF0 503 aaKnown RBP13.47□□□□□ -0.25
NOTCH3-203ENST00000595514 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.47□□□□□ -0.25
NOTCH3-203ENST00000595514 ANGEL1Q9UNK9 670 aaKnown RBP13.47□□□□□ -0.25
NOTCH3-203ENST00000595514 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
NOTCH3-203ENST00000595514 UFL1O94874 794 aa13.46□□□□□ -0.25
NOTCH3-203ENST00000595514 ZBTB48P10074 688 aaPredicted RBP13.46□□□□□ -0.25
NOTCH3-203ENST00000595514 GMLQ99445 158 aa13.46□□□□□ -0.25
NOTCH3-203ENST00000595514 PTCH2Q9Y6C5 1203 aa13.46□□□□□ -0.25
NOTCH3-203ENST00000595514 LAMB2P55268 1798 aa13.45□□□□□ -0.26
NOTCH3-203ENST00000595514 U2AF1L5P0DN76 240 aaPredicted RBP13.45□□□□□ -0.26
NOTCH3-203ENST00000595514 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.26
NOTCH3-203ENST00000595514 SF3B3Q15393 1217 aaKnown RBP13.45□□□□□ -0.26
NOTCH3-203ENST00000595514 OGFOD1Q8N543 542 aa13.45□□□□□ -0.26
NOTCH3-203ENST00000595514 WNK4Q96J92 1243 aa13.45□□□□□ -0.26
NOTCH3-203ENST00000595514 ANKIB1Q9P2G1 1089 aa13.45□□□□□ -0.26
NOTCH3-203ENST00000595514 GGA1Q9UJY5 639 aa13.45□□□□□ -0.26
NOTCH3-203ENST00000595514 SCN9AQ15858 1988 aa13.44□□□□□ -0.26
NOTCH3-203ENST00000595514 USP17L3A6NCW0 530 aa13.44□□□□□ -0.26
NOTCH3-203ENST00000595514 USP17L4A6NCW7 530 aa13.44□□□□□ -0.26
NOTCH3-203ENST00000595514 WNT10BO00744 389 aa13.44□□□□□ -0.26
NOTCH3-203ENST00000595514 USP17L1Q7RTZ2 530 aa13.44□□□□□ -0.26
NOTCH3-203ENST00000595514 LRP10Q7Z4F1 713 aa13.44□□□□□ -0.26
NOTCH3-203ENST00000595514 PRO3102Q9H379 93 aa13.44□□□□□ -0.26
NOTCH3-203ENST00000595514 PODXL2Q9NZ53 605 aa13.44□□□□□ -0.26
NOTCH3-203ENST00000595514 WTIPA6NIX2 430 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms