RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 TERF2Q15554 542 aa21.07■□□□□ 0.96
SPC24-206ENST00000592540 CCDC73Q6ZRK6 1079 aa21.07■□□□□ 0.96
SPC24-206ENST00000592540 ANO10Q9NW15 660 aa21.07■□□□□ 0.96
SPC24-206ENST00000592540 FAM53CQ9NYF3 392 aa21.07■□□□□ 0.96
SPC24-206ENST00000592540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.07■□□□□ 0.96
SPC24-206ENST00000592540 ZNF530Q6P9A1 599 aaPredicted RBP21.07■□□□□ 0.96
SPC24-206ENST00000592540 IP6K1Q92551 441 aa21.07■□□□□ 0.96
SPC24-206ENST00000592540 FTOQ9C0B1 505 aaKnown RBP eCLIP21.07■□□□□ 0.96
SPC24-206ENST00000592540 A0A087WWV3 80 aa21.06■□□□□ 0.96
SPC24-206ENST00000592540 NAA16Q6N069 864 aaPredicted RBP21.06■□□□□ 0.96
SPC24-206ENST00000592540 FBXO38Q6PIJ6 1188 aa21.06■□□□□ 0.96
SPC24-206ENST00000592540 KLHDC4Q8TBB5 520 aa21.06■□□□□ 0.96
SPC24-206ENST00000592540 LLPHQ9BRT6 129 aaKnown RBP21.06■□□□□ 0.96
SPC24-206ENST00000592540 MRC1P22897 1456 aa21.06■□□□□ 0.96
SPC24-206ENST00000592540 KINO60870 393 aaKnown RBP21.06■□□□□ 0.96
SPC24-206ENST00000592540 ELF2Q15723 593 aa21.06■□□□□ 0.96
SPC24-206ENST00000592540 ENGASEQ8NFI3 743 aa21.06■□□□□ 0.96
SPC24-206ENST00000592540 ANKARQ7Z5J8 1434 aa21.05■□□□□ 0.96
SPC24-206ENST00000592540 SLFNL1Q499Z3 407 aa21.05■□□□□ 0.96
SPC24-206ENST00000592540 CYB5RLQ6IPT4 315 aa21.05■□□□□ 0.96
SPC24-206ENST00000592540 U3KPZ7 1027 aaPredicted RBP21.05■□□□□ 0.96
SPC24-206ENST00000592540 PRAMEF22A3QJZ6 481 aa21.05■□□□□ 0.96
SPC24-206ENST00000592540 PFKFB2O60825 505 aa21.05■□□□□ 0.96
SPC24-206ENST00000592540 SLU7O95391 586 aaKnown RBP21.05■□□□□ 0.96
SPC24-206ENST00000592540 FAM160A1Q05DH4 1040 aa21.05■□□□□ 0.96
SPC24-206ENST00000592540 LRRC2Q9BYS8 371 aa21.05■□□□□ 0.96
SPC24-206ENST00000592540 ERBB3P21860 1342 aa21.04■□□□□ 0.96
SPC24-206ENST00000592540 HEG1Q9ULI3 1381 aa21.04■□□□□ 0.96
SPC24-206ENST00000592540 KIF2AO00139 706 aaPredicted RBP21.04■□□□□ 0.96
SPC24-206ENST00000592540 CYP21A2P08686 494 aa21.04■□□□□ 0.96
SPC24-206ENST00000592540 CEP57L1Q8IYX8 460 aa21.04■□□□□ 0.96
SPC24-206ENST00000592540 NSUN7Q8NE18 718 aaKnown RBP21.04■□□□□ 0.96
SPC24-206ENST00000592540 USP28Q96RU2 1077 aa21.04■□□□□ 0.96
SPC24-206ENST00000592540 EID1Q9Y6B2 187 aa21.04■□□□□ 0.96
SPC24-206ENST00000592540 FOSBP53539 338 aa21.04■□□□□ 0.96
SPC24-206ENST00000592540 GSDMDP57764 484 aa21.04■□□□□ 0.96
SPC24-206ENST00000592540 C14orf37Q86TY3 774 aa21.04■□□□□ 0.96
SPC24-206ENST00000592540 AOPEPQ8N6M6 819 aa21.04■□□□□ 0.96
SPC24-206ENST00000592540 TBX22Q9Y458 520 aa21.04■□□□□ 0.96
SPC24-206ENST00000592540 A0A0U1RQG5 324 aaPredicted RBP21.03■□□□□ 0.96
SPC24-206ENST00000592540 RNMTO43148 476 aaKnown RBP21.03■□□□□ 0.96
SPC24-206ENST00000592540 ATP5JP18859 108 aa21.03■□□□□ 0.96
SPC24-206ENST00000592540 CCDC129Q6ZRS4 1044 aa21.03■□□□□ 0.96
SPC24-206ENST00000592540 ZNF609O15014 1411 aa21.03■□□□□ 0.96
SPC24-206ENST00000592540 NCAPD2Q15021 1401 aa21.03■□□□□ 0.96
SPC24-206ENST00000592540 DDX58O95786 925 aaKnown RBP21.03■□□□□ 0.96
SPC24-206ENST00000592540 PLEKHO1Q53GL0 409 aaPredicted RBP21.03■□□□□ 0.96
SPC24-206ENST00000592540 NBPF11Q86T75 865 aa21.03■□□□□ 0.96
SPC24-206ENST00000592540 OSBPL5Q9H0X9 879 aaPredicted RBP21.03■□□□□ 0.96
SPC24-206ENST00000592540 CTDNEP1O95476 244 aa21.02■□□□□ 0.96
SPC24-206ENST00000592540 FGD1P98174 961 aa21.02■□□□□ 0.96
SPC24-206ENST00000592540 AIMP1Q12904 312 aaKnown RBP21.02■□□□□ 0.96
SPC24-206ENST00000592540 ATL3Q6DD88 541 aa21.02■□□□□ 0.96
SPC24-206ENST00000592540 FSIP1Q8NA03 581 aa21.02■□□□□ 0.96
SPC24-206ENST00000592540 ZNF396Q96N95 335 aaPredicted RBP21.02■□□□□ 0.96
SPC24-206ENST00000592540 NAT10Q9H0A0 1025 aaKnown RBP21.02■□□□□ 0.96
SPC24-206ENST00000592540 IGKV5-2P06315 115 aa21.01■□□□□ 0.95
SPC24-206ENST00000592540 SEC62Q99442 399 aaKnown RBP21.01■□□□□ 0.95
SPC24-206ENST00000592540 PTPDC1A2A3K4 754 aa21.01■□□□□ 0.95
SPC24-206ENST00000592540 CHGBP05060 677 aa21.01■□□□□ 0.95
SPC24-206ENST00000592540 IMPACTQ9P2X3 320 aa21.01■□□□□ 0.95
SPC24-206ENST00000592540 DBNLQ9UJU6 430 aaKnown RBP21.01■□□□□ 0.95
SPC24-206ENST00000592540 ME1P48163 572 aa21■□□□□ 0.95
SPC24-206ENST00000592540 STOX1Q6ZVD7 989 aa21■□□□□ 0.95
SPC24-206ENST00000592540 ERCC4Q92889 916 aaPredicted RBP21■□□□□ 0.95
SPC24-206ENST00000592540 NDUFB9Q9Y6M9 179 aa21■□□□□ 0.95
SPC24-206ENST00000592540 RFX7Q2KHR2 1363 aa21■□□□□ 0.95
SPC24-206ENST00000592540 MCMDC2Q4G0Z9 681 aa21■□□□□ 0.95
SPC24-206ENST00000592540 DDX21Q9NR30 783 aaKnown RBP eCLIP21■□□□□ 0.95
SPC24-206ENST00000592540 E4F1Q66K89 784 aaPredicted RBP20.99■□□□□ 0.95
SPC24-206ENST00000592540 FBXW7Q969H0 707 aa20.99■□□□□ 0.95
SPC24-206ENST00000592540 L2HGDHQ9H9P8 463 aa20.99■□□□□ 0.95
SPC24-206ENST00000592540 ZNF446Q9NWS9 450 aa20.99■□□□□ 0.95
SPC24-206ENST00000592540 PXDNQ92626 1479 aa20.99■□□□□ 0.95
SPC24-206ENST00000592540 NFAT5O94916 1531 aa20.99■□□□□ 0.95
SPC24-206ENST00000592540 HMGB1P09429 215 aaKnown RBP20.99■□□□□ 0.95
SPC24-206ENST00000592540 EPHA10Q5JZY3 1008 aa20.99■□□□□ 0.95
SPC24-206ENST00000592540 DHX32Q7L7V1 743 aaKnown RBP20.99■□□□□ 0.95
SPC24-206ENST00000592540 LRRC59Q96AG4 307 aaKnown RBP20.99■□□□□ 0.95
SPC24-206ENST00000592540 APOBRQ0VD83 1088 aa20.98■□□□□ 0.95
SPC24-206ENST00000592540 TNNI3KQ59H18 835 aa20.98■□□□□ 0.95
SPC24-206ENST00000592540 C1orf141Q5JVX7 400 aa20.98■□□□□ 0.95
SPC24-206ENST00000592540 FMR1NBQ8N0W7 255 aaPredicted RBP20.98■□□□□ 0.95
SPC24-206ENST00000592540 FPGT-TNNI3KV9GXZ4 949 aa20.98■□□□□ 0.95
SPC24-206ENST00000592540 SIPA1L3O60292 1781 aaPredicted RBP20.98■□□□□ 0.95
SPC24-206ENST00000592540 AMOTQ4VCS5 1084 aa20.98■□□□□ 0.95
SPC24-206ENST00000592540 RIC3Q7Z5B4 369 aa20.98■□□□□ 0.95
SPC24-206ENST00000592540 ILDR1Q86SU0 546 aaPredicted RBP20.98■□□□□ 0.95
SPC24-206ENST00000592540 PPP1R13BQ96KQ4 1090 aa20.98■□□□□ 0.95
SPC24-206ENST00000592540 DNAJC2Q99543 621 aaKnown RBP20.98■□□□□ 0.95
SPC24-206ENST00000592540 OVOS2A0A0G2JMS6 1433 aa20.97■□□□□ 0.95
SPC24-206ENST00000592540 NPHP1O15259 732 aa20.97■□□□□ 0.95
SPC24-206ENST00000592540 PDIA6Q15084 440 aa20.97■□□□□ 0.95
SPC24-206ENST00000592540 MRPS27Q92552 414 aaKnown RBP20.97■□□□□ 0.95
SPC24-206ENST00000592540 COPRSQ9NQ92 184 aa20.97■□□□□ 0.95
SPC24-206ENST00000592540 NEURL1BA8MQ27 555 aa20.96■□□□□ 0.95
SPC24-206ENST00000592540 H2AFXP16104 143 aaPredicted RBP20.96■□□□□ 0.95
SPC24-206ENST00000592540 CCT2P78371 535 aaKnown RBP20.96■□□□□ 0.95
SPC24-206ENST00000592540 CCDC150Q8NCX0 1101 aa20.96■□□□□ 0.95
SPC24-206ENST00000592540 SDF4Q9BRK5 362 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms