RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 U3KPZ7 1027 aaPredicted RBP18.83■□□□□ 0.61
MBD1-227ENST00000592060 SPATA31A1Q5TZJ5 1347 aa18.83■□□□□ 0.6
MBD1-227ENST00000592060 NWD2Q9ULI1 1742 aa18.83■□□□□ 0.6
MBD1-227ENST00000592060 LRP5O75197 1615 aa18.83■□□□□ 0.6
MBD1-227ENST00000592060 STX6O43752 255 aa18.82■□□□□ 0.6
MBD1-227ENST00000592060 TOB2Q14106 344 aaPredicted RBP18.82■□□□□ 0.6
MBD1-227ENST00000592060 CDCA7Q9BWT1 371 aaPredicted RBP18.82■□□□□ 0.6
MBD1-227ENST00000592060 HELLSQ9NRZ9 838 aa18.82■□□□□ 0.6
MBD1-227ENST00000592060 RBM27Q9P2N5 1060 aaKnown RBP18.82■□□□□ 0.6
MBD1-227ENST00000592060 IFIT1P09914 478 aaKnown RBP18.82■□□□□ 0.6
MBD1-227ENST00000592060 GJB2P29033 226 aa18.82■□□□□ 0.6
MBD1-227ENST00000592060 KRT32Q14532 448 aa18.82■□□□□ 0.6
MBD1-227ENST00000592060 ZMYM1Q5SVZ6 1142 aa18.82■□□□□ 0.6
MBD1-227ENST00000592060 TMEM87AQ8NBN3 555 aa18.82■□□□□ 0.6
MBD1-227ENST00000592060 SLIT2O94813 1529 aa18.82■□□□□ 0.6
MBD1-227ENST00000592060 UBAP1LF5GYI3 381 aa18.81■□□□□ 0.6
MBD1-227ENST00000592060 GPTP24298 496 aa18.81■□□□□ 0.6
MBD1-227ENST00000592060 PRIM1P49642 420 aaKnown RBP18.81■□□□□ 0.6
MBD1-227ENST00000592060 ANKRD1Q15327 319 aa18.81■□□□□ 0.6
MBD1-227ENST00000592060 SYNE4Q8N205 404 aa18.81■□□□□ 0.6
MBD1-227ENST00000592060 TMEM63CQ9P1W3 806 aa18.81■□□□□ 0.6
MBD1-227ENST00000592060 MYH7P12883 1935 aa18.81■□□□□ 0.6
MBD1-227ENST00000592060 IL6STP40189 918 aaPredicted RBP18.81■□□□□ 0.6
MBD1-227ENST00000592060 RTN4Q9NQC3 1192 aaKnown RBP18.81■□□□□ 0.6
MBD1-227ENST00000592060 AKAP2Q9Y2D5 859 aa18.81■□□□□ 0.6
MBD1-227ENST00000592060 THRAP3Q9Y2W1 955 aaKnown RBP18.81■□□□□ 0.6
MBD1-227ENST00000592060 ERVV-1B6SEH8 477 aa18.8■□□□□ 0.6
MBD1-227ENST00000592060 F13A1P00488 732 aa18.8■□□□□ 0.6
MBD1-227ENST00000592060 ADORA1P30542 326 aa18.8■□□□□ 0.6
MBD1-227ENST00000592060 IFIT5Q13325 482 aaKnown RBP18.8■□□□□ 0.6
MBD1-227ENST00000592060 NECAB1Q8N987 351 aa18.8■□□□□ 0.6
MBD1-227ENST00000592060 SYTL4Q96C24 671 aaPredicted RBP18.8■□□□□ 0.6
MBD1-227ENST00000592060 TCEANC2Q96MN5 208 aa18.8■□□□□ 0.6
MBD1-227ENST00000592060 CYP21A2P08686 494 aa18.79■□□□□ 0.6
MBD1-227ENST00000592060 SLFNL1Q499Z3 407 aa18.79■□□□□ 0.6
MBD1-227ENST00000592060 TTLL11Q8NHH1 800 aa18.79■□□□□ 0.6
MBD1-227ENST00000592060 CCDC85AQ96PX6 553 aaPredicted RBP18.79■□□□□ 0.6
MBD1-227ENST00000592060 MTMR6Q9Y217 621 aa18.79■□□□□ 0.6
MBD1-227ENST00000592060 CTSWP56202 376 aa18.79■□□□□ 0.6
MBD1-227ENST00000592060 XAGE2Q96GT9 111 aa18.79■□□□□ 0.6
MBD1-227ENST00000592060 DSCC1Q9BVC3 393 aa18.79■□□□□ 0.6
MBD1-227ENST00000592060 ARAP2Q8WZ64 1704 aa18.79■□□□□ 0.6
MBD1-227ENST00000592060 AKAP11Q9UKA4 1901 aa18.78■□□□□ 0.6
MBD1-227ENST00000592060 RNF113AO15541 343 aaKnown RBP18.78■□□□□ 0.6
MBD1-227ENST00000592060 TAF7LQ5H9L4 462 aa18.78■□□□□ 0.6
MBD1-227ENST00000592060 FAM43AQ8N2R8 423 aa18.78■□□□□ 0.6
MBD1-227ENST00000592060 NEK1Q96PY6 1258 aa18.78■□□□□ 0.6
MBD1-227ENST00000592060 RIPOR2Q9Y4F9 1068 aa18.78■□□□□ 0.6
MBD1-227ENST00000592060 MAST3O60307 1309 aa18.78■□□□□ 0.6
MBD1-227ENST00000592060 ABCC12Q96J65 1359 aa18.78■□□□□ 0.6
MBD1-227ENST00000592060 ADAMTS2O95450 1211 aa18.77■□□□□ 0.6
MBD1-227ENST00000592060 USP48Q86UV5 1035 aa18.77■□□□□ 0.6
MBD1-227ENST00000592060 DZIP3Q86Y13 1208 aaKnown RBP18.77■□□□□ 0.6
MBD1-227ENST00000592060 GREM2Q9H772 168 aa18.77■□□□□ 0.6
MBD1-227ENST00000592060 GDPD2Q9HCC8 539 aa18.77■□□□□ 0.6
MBD1-227ENST00000592060 UBN2Q6ZU65 1347 aa18.77■□□□□ 0.6
MBD1-227ENST00000592060 ITGA6P23229 1130 aa18.77■□□□□ 0.59
MBD1-227ENST00000592060 DDB1Q16531 1140 aa18.77■□□□□ 0.59
MBD1-227ENST00000592060 FOXD4L6Q3SYB3 417 aaPredicted RBP18.77■□□□□ 0.59
MBD1-227ENST00000592060 FOXD4L3Q6VB84 417 aaPredicted RBP18.77■□□□□ 0.59
MBD1-227ENST00000592060 ZNF34Q8IZ26 560 aa18.77■□□□□ 0.59
MBD1-227ENST00000592060 LAMB2P55268 1798 aa18.76■□□□□ 0.59
MBD1-227ENST00000592060 IRS4O14654 1257 aaPredicted RBP18.76■□□□□ 0.59
MBD1-227ENST00000592060 GADD45BO75293 160 aaPredicted RBP18.76■□□□□ 0.59
MBD1-227ENST00000592060 CCDC158Q5M9N0 1113 aa18.76■□□□□ 0.59
MBD1-227ENST00000592060 TTC39AQ5SRH9 613 aa18.76■□□□□ 0.59
MBD1-227ENST00000592060 STOX1Q6ZVD7 989 aa18.76■□□□□ 0.59
MBD1-227ENST00000592060 CNPY2Q9Y2B0 182 aa18.76■□□□□ 0.59
MBD1-227ENST00000592060 SPATA31A5Q5VU36 1347 aa18.75■□□□□ 0.59
MBD1-227ENST00000592060 SPATA31A7Q8IWB4 1347 aa18.75■□□□□ 0.59
MBD1-227ENST00000592060 DTNBO60941 627 aa18.75■□□□□ 0.59
MBD1-227ENST00000592060 DDX60Q8IY21 1712 aaKnown RBP18.75■□□□□ 0.59
MBD1-227ENST00000592060 COL5A3P25940 1745 aaPredicted RBP18.75■□□□□ 0.59
MBD1-227ENST00000592060 M0R2C6 588 aa18.75■□□□□ 0.59
MBD1-227ENST00000592060 EIF5P55010 431 aaKnown RBP18.75■□□□□ 0.59
MBD1-227ENST00000592060 SCARF1Q14162 830 aa18.75■□□□□ 0.59
MBD1-227ENST00000592060 INTS5Q6P9B9 1019 aaKnown RBP18.75■□□□□ 0.59
MBD1-227ENST00000592060 VGLL2Q8N8G2 317 aa18.75■□□□□ 0.59
MBD1-227ENST00000592060 MARCH10Q8NA82 808 aaPredicted RBP18.75■□□□□ 0.59
MBD1-227ENST00000592060 TRMT112Q9UI30 125 aaKnown RBP18.75■□□□□ 0.59
MBD1-227ENST00000592060 TBC1D2BQ9UPU7 963 aa18.75■□□□□ 0.59
MBD1-227ENST00000592060 MYH14Q7Z406 1995 aaKnown RBP18.75■□□□□ 0.59
MBD1-227ENST00000592060 ANKRD18BA2A2Z9 1011 aa18.74■□□□□ 0.59
MBD1-227ENST00000592060 PDE8AO60658 829 aa18.74■□□□□ 0.59
MBD1-227ENST00000592060 HSPD1P10809 573 aaKnown RBP18.74■□□□□ 0.59
MBD1-227ENST00000592060 NASPP49321 788 aaPredicted RBP18.74■□□□□ 0.59
MBD1-227ENST00000592060 ATP2B3Q16720 1220 aa18.74■□□□□ 0.59
MBD1-227ENST00000592060 LRSAM1Q6UWE0 723 aa18.74■□□□□ 0.59
MBD1-227ENST00000592060 ATP6V1DQ9Y5K8 247 aa18.74■□□□□ 0.59
MBD1-227ENST00000592060 METTL24Q5JXM2 366 aa18.73■□□□□ 0.59
MBD1-227ENST00000592060 GORABQ5T7V8 394 aa18.73■□□□□ 0.59
MBD1-227ENST00000592060 CCDC87Q9NVE4 849 aa18.73■□□□□ 0.59
MBD1-227ENST00000592060 BCORQ6W2J9 1755 aa18.73■□□□□ 0.59
MBD1-227ENST00000592060 PDIA4P13667 645 aaKnown RBP18.73■□□□□ 0.59
MBD1-227ENST00000592060 FKBP4Q02790 459 aaKnown RBP eCLIP18.73■□□□□ 0.59
MBD1-227ENST00000592060 LDHAL6AQ6ZMR3 332 aa18.73■□□□□ 0.59
MBD1-227ENST00000592060 GTF3C6Q969F1 213 aa18.73■□□□□ 0.59
MBD1-227ENST00000592060 OSBP2Q969R2 916 aa18.73■□□□□ 0.59
MBD1-227ENST00000592060 ZNF831Q5JPB2 1677 aa18.73■□□□□ 0.59
MBD1-227ENST00000592060 SYCE3A1L190 88 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms