RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 VEGFBP49765 207 aa12.32□□□□□ -0.44
BRCA1-226ENST00000591534 RIPK4P57078 832 aa12.32□□□□□ -0.44
BRCA1-226ENST00000591534 MAP2K1Q02750 393 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-226ENST00000591534 DDX10Q13206 875 aaKnown RBP12.32□□□□□ -0.44
BRCA1-226ENST00000591534 MAP1SQ66K74 1059 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-226ENST00000591534 USP50Q70EL3 339 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-226ENST00000591534 THUMPD2Q9BTF0 503 aaKnown RBP12.32□□□□□ -0.44
BRCA1-226ENST00000591534 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
BRCA1-226ENST00000591534 ABCC12Q96J65 1359 aa12.31□□□□□ -0.44
BRCA1-226ENST00000591534 GRXCR2A6NFK2 248 aa12.31□□□□□ -0.44
BRCA1-226ENST00000591534 RASSF10A6NK89 507 aa12.31□□□□□ -0.44
BRCA1-226ENST00000591534 PPIP5K2O43314 1243 aa12.31□□□□□ -0.44
BRCA1-226ENST00000591534 NTSR2O95665 410 aa12.31□□□□□ -0.44
BRCA1-226ENST00000591534 EIF2S2P20042 333 aaKnown RBP12.31□□□□□ -0.44
BRCA1-226ENST00000591534 ECE1P42892 770 aa12.31□□□□□ -0.44
BRCA1-226ENST00000591534 SLC10A5Q5PT55 438 aa12.31□□□□□ -0.44
BRCA1-226ENST00000591534 BEGAINQ9BUH8 593 aa12.31□□□□□ -0.44
BRCA1-226ENST00000591534 ATP6V0A2Q9Y487 856 aa12.31□□□□□ -0.44
BRCA1-226ENST00000591534 UBN2Q6ZU65 1347 aa12.31□□□□□ -0.44
BRCA1-226ENST00000591534 TCERG1O14776 1098 aaKnown RBP12.3□□□□□ -0.44
BRCA1-226ENST00000591534 FOXN1O15353 648 aa12.3□□□□□ -0.44
BRCA1-226ENST00000591534 DDX21Q9NR30 783 aaKnown RBP eCLIP12.3□□□□□ -0.44
BRCA1-226ENST00000591534 DLG5Q8TDM6 1919 aa12.29□□□□□ -0.44
BRCA1-226ENST00000591534 DPP8Q6V1X1 898 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-226ENST00000591534 DDX46Q7L014 1031 aaKnown RBP12.29□□□□□ -0.44
BRCA1-226ENST00000591534 TMC4Q7Z404 712 aa12.29□□□□□ -0.44
BRCA1-226ENST00000591534 GPIHBP1Q8IV16 184 aa12.29□□□□□ -0.44
BRCA1-226ENST00000591534 ADARB2Q9NS39 739 aaKnown RBP12.29□□□□□ -0.44
BRCA1-226ENST00000591534 WBP1LQ9NX94 342 aa12.29□□□□□ -0.44
BRCA1-226ENST00000591534 ZNRF3Q9ULT6 936 aa12.29□□□□□ -0.44
BRCA1-226ENST00000591534 LAMB4A4D0S4 1761 aa12.28□□□□□ -0.44
BRCA1-226ENST00000591534 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-226ENST00000591534 TNIP1Q15025 636 aa12.28□□□□□ -0.44
BRCA1-226ENST00000591534 SP8Q8IXZ3 490 aa12.28□□□□□ -0.44
BRCA1-226ENST00000591534 OXER1Q8TDS5 423 aa12.28□□□□□ -0.44
BRCA1-226ENST00000591534 TRMT112Q9UI30 125 aaKnown RBP12.28□□□□□ -0.44
BRCA1-226ENST00000591534 WDR33Q9C0J8 1336 aaKnown RBP12.28□□□□□ -0.44
BRCA1-226ENST00000591534 TMPOP42166 694 aaKnown RBP12.27□□□□□ -0.45
BRCA1-226ENST00000591534 EPS15P42566 896 aa12.27□□□□□ -0.45
BRCA1-226ENST00000591534 SCNN1DP51172 638 aa12.27□□□□□ -0.45
BRCA1-226ENST00000591534 AIMP1Q12904 312 aaKnown RBP12.27□□□□□ -0.45
BRCA1-226ENST00000591534 TCIRG1Q13488 830 aa12.27□□□□□ -0.45
BRCA1-226ENST00000591534 AOC3Q16853 763 aa12.27□□□□□ -0.45
BRCA1-226ENST00000591534 COPS6Q7L5N1 327 aa12.27□□□□□ -0.45
BRCA1-226ENST00000591534 MPNDQ8N594 471 aa12.27□□□□□ -0.45
BRCA1-226ENST00000591534 RTFDC1Q9BY42 306 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-226ENST00000591534 SH3TC1Q8TE82 1336 aa12.27□□□□□ -0.45
BRCA1-226ENST00000591534 CDHR2Q9BYE9 1310 aa12.27□□□□□ -0.45
BRCA1-226ENST00000591534 SNED1Q8TER0 1413 aa12.27□□□□□ -0.45
BRCA1-226ENST00000591534 CACNA1SQ13698 1873 aa12.26□□□□□ -0.45
BRCA1-226ENST00000591534 HOXB7P09629 217 aa12.26□□□□□ -0.45
BRCA1-226ENST00000591534 HSP90B1P14625 803 aaKnown RBP12.26□□□□□ -0.45
BRCA1-226ENST00000591534 WDR43Q15061 677 aaKnown RBP eCLIP12.26□□□□□ -0.45
BRCA1-226ENST00000591534 C3orf67Q6ZVT6 689 aa12.26□□□□□ -0.45
BRCA1-226ENST00000591534 NLRP10Q86W26 655 aa12.26□□□□□ -0.45
BRCA1-226ENST00000591534 XAGE3Q8WTP9 111 aa12.26□□□□□ -0.45
BRCA1-226ENST00000591534 BCL2L13Q9BXK5 485 aa12.26□□□□□ -0.45
BRCA1-226ENST00000591534 GPRC5DQ9NZD1 345 aa12.26□□□□□ -0.45
BRCA1-226ENST00000591534 ABCC4O15439 1325 aa12.26□□□□□ -0.45
BRCA1-226ENST00000591534 LBX1P52954 281 aa12.25□□□□□ -0.45
BRCA1-226ENST00000591534 KIAA2012Q0VF49 1180 aa12.25□□□□□ -0.45
BRCA1-226ENST00000591534 GRAPQ13588 217 aa12.25□□□□□ -0.45
BRCA1-226ENST00000591534 CIAPIN1Q6FI81 312 aa12.25□□□□□ -0.45
BRCA1-226ENST00000591534 LRP10Q7Z4F1 713 aa12.25□□□□□ -0.45
BRCA1-226ENST00000591534 GRAPLQ8TC17 118 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-226ENST00000591534 CHMP4AQ9BY43 222 aa12.25□□□□□ -0.45
BRCA1-226ENST00000591534 KDM3BQ7LBC6 1761 aa12.25□□□□□ -0.45
BRCA1-226ENST00000591534 H7C1D1 291 aa12.24□□□□□ -0.45
BRCA1-226ENST00000591534 CHL1O00533 1208 aa12.24□□□□□ -0.45
BRCA1-226ENST00000591534 HCLS1P14317 486 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-226ENST00000591534 CXCL9Q07325 125 aa12.24□□□□□ -0.45
BRCA1-226ENST00000591534 NEUROD2Q15784 382 aa12.24□□□□□ -0.45
BRCA1-226ENST00000591534 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
BRCA1-226ENST00000591534 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
BRCA1-226ENST00000591534 DDX12PQ92771 950 aa12.24□□□□□ -0.45
BRCA1-226ENST00000591534 RUNDC1Q96C34 613 aa12.24□□□□□ -0.45
BRCA1-226ENST00000591534 CAPNS2Q96L46 248 aa12.24□□□□□ -0.45
BRCA1-226ENST00000591534 GPR101Q96P66 508 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-226ENST00000591534 DBF4Q9UBU7 674 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-226ENST00000591534 LAS1LQ9Y4W2 734 aaKnown RBP12.24□□□□□ -0.45
BRCA1-226ENST00000591534 MYBBP1AQ9BQG0 1328 aaKnown RBP12.23□□□□□ -0.45
BRCA1-226ENST00000591534 CA12O43570 354 aa12.23□□□□□ -0.45
BRCA1-226ENST00000591534 ANXA1P04083 346 aa12.23□□□□□ -0.45
BRCA1-226ENST00000591534 MAP2K2P36507 400 aa12.23□□□□□ -0.45
BRCA1-226ENST00000591534 GMPSP49915 693 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-226ENST00000591534 PROSER3Q2NL68 480 aa12.23□□□□□ -0.45
BRCA1-226ENST00000591534 MAMSTRQ6ZN01 415 aa12.23□□□□□ -0.45
BRCA1-226ENST00000591534 ANKRD13DQ6ZTN6 518 aa12.23□□□□□ -0.45
BRCA1-226ENST00000591534 PLBD2Q8NHP8 589 aa12.23□□□□□ -0.45
BRCA1-226ENST00000591534 HYPKQ9NX55 129 aa12.23□□□□□ -0.45
BRCA1-226ENST00000591534 TLL2Q9Y6L7 1015 aa12.23□□□□□ -0.45
BRCA1-226ENST00000591534 POTEMA6NI47 508 aa12.22□□□□□ -0.45
BRCA1-226ENST00000591534 CALD1Q05682 793 aaKnown RBP12.22□□□□□ -0.45
BRCA1-226ENST00000591534 GRM1Q13255 1194 aa12.22□□□□□ -0.45
BRCA1-226ENST00000591534 CDC37L1Q7L3B6 337 aa12.22□□□□□ -0.45
BRCA1-226ENST00000591534 KRI1Q8N9T8 703 aaKnown RBP12.22□□□□□ -0.45
BRCA1-226ENST00000591534 HHIPL1Q96JK4 782 aa12.22□□□□□ -0.45
BRCA1-226ENST00000591534 EYA3Q99504 573 aa12.22□□□□□ -0.45
BRCA1-226ENST00000591534 SCUBE2Q9NQ36 999 aa12.22□□□□□ -0.45
BRCA1-226ENST00000591534 NUP98P52948 1817 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 1966.4 ms