RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 SREBF2Q12772 1141 aa17.76■□□□□ 0.43
LSM12-203ENST00000590563 PRAMEF18Q5VWM3 479 aa17.76■□□□□ 0.43
LSM12-203ENST00000590563 TMC4Q7Z404 712 aa17.76■□□□□ 0.43
LSM12-203ENST00000590563 CAP1Q01518 475 aa17.75■□□□□ 0.43
LSM12-203ENST00000590563 TAF7Q15545 349 aaPredicted RBP17.75■□□□□ 0.43
LSM12-203ENST00000590563 RTF1Q92541 710 aaKnown RBP17.75■□□□□ 0.43
LSM12-203ENST00000590563 PTPN22Q9Y2R2 807 aa17.75■□□□□ 0.43
LSM12-203ENST00000590563 PER1O15534 1290 aaPredicted RBP17.74■□□□□ 0.43
LSM12-203ENST00000590563 EIF4G2P78344 907 aaKnown RBP eCLIP17.74■□□□□ 0.43
LSM12-203ENST00000590563 GPSM2P81274 684 aa17.74■□□□□ 0.43
LSM12-203ENST00000590563 CC2D1BQ5T0F9 858 aaKnown RBP17.74■□□□□ 0.43
LSM12-203ENST00000590563 NSFL1CQ9UNZ2 370 aaKnown RBP17.74■□□□□ 0.43
LSM12-203ENST00000590563 EIF4A1P60842 406 aaKnown RBP17.73■□□□□ 0.43
LSM12-203ENST00000590563 CELF1Q92879 486 aaKnown RBP17.73■□□□□ 0.43
LSM12-203ENST00000590563 TRIOBPQ9H2D6 2365 aa17.72■□□□□ 0.43
LSM12-203ENST00000590563 C6orf229H3BNL8 230 aa17.72■□□□□ 0.43
LSM12-203ENST00000590563 CHRDL2Q6WN34 429 aa17.72■□□□□ 0.43
LSM12-203ENST00000590563 NLRP10Q86W26 655 aa17.72■□□□□ 0.43
LSM12-203ENST00000590563 GMLQ99445 158 aa17.72■□□□□ 0.43
LSM12-203ENST00000590563 LAMB1P07942 1786 aa17.71■□□□□ 0.43
LSM12-203ENST00000590563 PSME4Q14997 1843 aa17.71■□□□□ 0.43
LSM12-203ENST00000590563 HTATSF1O43719 755 aaKnown RBP17.71■□□□□ 0.43
LSM12-203ENST00000590563 PTPN12Q05209 780 aaKnown RBP17.71■□□□□ 0.43
LSM12-203ENST00000590563 PDIA6Q15084 440 aa17.71■□□□□ 0.43
LSM12-203ENST00000590563 RSBN1LQ6PCB5 846 aaPredicted RBP17.71■□□□□ 0.43
LSM12-203ENST00000590563 TBC1D16Q8TBP0 767 aa17.71■□□□□ 0.43
LSM12-203ENST00000590563 ZNF333Q96JL9 665 aa17.71■□□□□ 0.43
LSM12-203ENST00000590563 THUMPD2Q9BTF0 503 aaKnown RBP17.71■□□□□ 0.43
LSM12-203ENST00000590563 MYOZ2Q9NPC6 264 aa17.71■□□□□ 0.43
LSM12-203ENST00000590563 RBM27Q9P2N5 1060 aaKnown RBP17.71■□□□□ 0.43
LSM12-203ENST00000590563 ERBB4Q15303 1308 aa17.71■□□□□ 0.42
LSM12-203ENST00000590563 SPRYD7Q5W111 196 aa17.7■□□□□ 0.42
LSM12-203ENST00000590563 AGBL3Q8NEM8 1001 aa17.7■□□□□ 0.42
LSM12-203ENST00000590563 CD99L2Q8TCZ2 262 aa17.7■□□□□ 0.42
LSM12-203ENST00000590563 ALDH1A1P00352 501 aa17.69■□□□□ 0.42
LSM12-203ENST00000590563 TTLL12Q14166 644 aaPredicted RBP17.69■□□□□ 0.42
LSM12-203ENST00000590563 IFNL1Q8IU54 200 aa17.69■□□□□ 0.42
LSM12-203ENST00000590563 EYA3Q99504 573 aa17.69■□□□□ 0.42
LSM12-203ENST00000590563 KIAA0100Q14667 2235 aaKnown RBP17.69■□□□□ 0.42
LSM12-203ENST00000590563 IGF2BP3O00425 579 aaKnown RBP eCLIP17.68■□□□□ 0.42
LSM12-203ENST00000590563 PROSER3Q2NL68 480 aa17.68■□□□□ 0.42
LSM12-203ENST00000590563 PRO3102Q9H379 93 aa17.68■□□□□ 0.42
LSM12-203ENST00000590563 SH3TC1Q8TE82 1336 aa17.68■□□□□ 0.42
LSM12-203ENST00000590563 COL6A3P12111 3177 aa17.67■□□□□ 0.42
LSM12-203ENST00000590563 NBPF9Q3BBW0 867 aa17.67■□□□□ 0.42
LSM12-203ENST00000590563 LDLRAD1Q5T700 205 aa17.67■□□□□ 0.42
LSM12-203ENST00000590563 NECTIN2Q92692 538 aa17.67■□□□□ 0.42
LSM12-203ENST00000590563 ERO1AQ96HE7 468 aa17.67■□□□□ 0.42
LSM12-203ENST00000590563 TRMT112Q9UI30 125 aaKnown RBP17.67■□□□□ 0.42
LSM12-203ENST00000590563 TIMELESSQ9UNS1 1208 aa17.67■□□□□ 0.42
LSM12-203ENST00000590563 ZNF646O15015 1829 aaPredicted RBP17.66■□□□□ 0.42
LSM12-203ENST00000590563 RANBP2P49792 3224 aaKnown RBP17.66■□□□□ 0.42
LSM12-203ENST00000590563 USP17L8P0C7I0 530 aa17.66■□□□□ 0.42
LSM12-203ENST00000590563 ANXA1P04083 346 aa17.65■□□□□ 0.42
LSM12-203ENST00000590563 TCIRG1Q13488 830 aa17.65■□□□□ 0.42
LSM12-203ENST00000590563 PNISRQ8TF01 805 aaKnown RBP17.65■□□□□ 0.42
LSM12-203ENST00000590563 TMEM106CQ9BVX2 250 aa17.65■□□□□ 0.42
LSM12-203ENST00000590563 EFCC1Q9HA90 598 aa17.65■□□□□ 0.42
LSM12-203ENST00000590563 MANSC4A6NHS7 340 aaPredicted RBP17.64■□□□□ 0.41
LSM12-203ENST00000590563 MNX1P50219 401 aaPredicted RBP17.64■□□□□ 0.41
LSM12-203ENST00000590563 SF3B3Q15393 1217 aaKnown RBP17.64■□□□□ 0.41
LSM12-203ENST00000590563 ZNF428Q96B54 188 aa17.64■□□□□ 0.41
LSM12-203ENST00000590563 ZC3H12CQ9C0D7 883 aaKnown RBP17.64■□□□□ 0.41
LSM12-203ENST00000590563 PODXL2Q9NZ53 605 aa17.64■□□□□ 0.41
LSM12-203ENST00000590563 FZD1Q9UP38 647 aa17.64■□□□□ 0.41
LSM12-203ENST00000590563 CRHR2Q13324 411 aa17.63■□□□□ 0.41
LSM12-203ENST00000590563 PRKG1Q13976 671 aa17.63■□□□□ 0.41
LSM12-203ENST00000590563 HSP90AB3PQ58FF7 597 aa17.63■□□□□ 0.41
LSM12-203ENST00000590563 SSC5DA1L4H1 1573 aa17.62■□□□□ 0.41
LSM12-203ENST00000590563 WNT10BO00744 389 aa17.62■□□□□ 0.41
LSM12-203ENST00000590563 NF2P35240 595 aa17.62■□□□□ 0.41
LSM12-203ENST00000590563 ARMC9Q7Z3E5 817 aa17.62■□□□□ 0.41
LSM12-203ENST00000590563 PTCH2Q9Y6C5 1203 aa17.62■□□□□ 0.41
LSM12-203ENST00000590563 UFL1O94874 794 aa17.61■□□□□ 0.41
LSM12-203ENST00000590563 U2AF1L5P0DN76 240 aaPredicted RBP17.61■□□□□ 0.41
LSM12-203ENST00000590563 INHBEP58166 350 aa17.61■□□□□ 0.41
LSM12-203ENST00000590563 U2AF1Q01081 240 aaKnown RBP eCLIP17.61■□□□□ 0.41
LSM12-203ENST00000590563 WNK4Q96J92 1243 aa17.61■□□□□ 0.41
LSM12-203ENST00000590563 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
LSM12-203ENST00000590563 SOX1O00570 391 aaPredicted RBP17.6■□□□□ 0.41
LSM12-203ENST00000590563 ZBTB48P10074 688 aaPredicted RBP17.6■□□□□ 0.41
LSM12-203ENST00000590563 ANGEL1Q9UNK9 670 aaKnown RBP17.6■□□□□ 0.41
LSM12-203ENST00000590563 SP3Q02447 781 aa17.59■□□□□ 0.41
LSM12-203ENST00000590563 COPS6Q7L5N1 327 aa17.59■□□□□ 0.41
LSM12-203ENST00000590563 XAGE3Q8WTP9 111 aa17.59■□□□□ 0.41
LSM12-203ENST00000590563 SHISA4Q96DD7 197 aa17.59■□□□□ 0.41
LSM12-203ENST00000590563 CLMNQ96JQ2 1002 aa17.59■□□□□ 0.41
LSM12-203ENST00000590563 USP17L3A6NCW0 530 aa17.58■□□□□ 0.4
LSM12-203ENST00000590563 USP17L4A6NCW7 530 aa17.58■□□□□ 0.4
LSM12-203ENST00000590563 SASH1O94885 1247 aa17.58■□□□□ 0.4
LSM12-203ENST00000590563 GJA5P36382 358 aa17.58■□□□□ 0.4
LSM12-203ENST00000590563 RPS8P62241 208 aaKnown RBP17.58■□□□□ 0.4
LSM12-203ENST00000590563 CNGB1Q14028 1251 aaPredicted RBP17.58■□□□□ 0.4
LSM12-203ENST00000590563 MAP3K11Q16584 847 aa17.58■□□□□ 0.4
LSM12-203ENST00000590563 SLC4A8Q2Y0W8 1093 aa17.58■□□□□ 0.4
LSM12-203ENST00000590563 SLC9C1Q4G0N8 1177 aa17.58■□□□□ 0.4
LSM12-203ENST00000590563 USP17L1Q7RTZ2 530 aa17.58■□□□□ 0.4
LSM12-203ENST00000590563 FAM89AQ96GI7 184 aa17.58■□□□□ 0.4
LSM12-203ENST00000590563 PTPN18Q99952 460 aa17.58■□□□□ 0.4
LSM12-203ENST00000590563 MXD3Q9BW11 206 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms