RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 NUTM1Q86Y26 1132 aa14.49□□□□□ -0.09
SMAD4-211ENST00000590499 EMILIN3Q9NT22 766 aa14.49□□□□□ -0.09
SMAD4-211ENST00000590499 HYPKQ9NX55 129 aa14.49□□□□□ -0.09
SMAD4-211ENST00000590499 ZNF521Q96K83 1311 aa14.48□□□□□ -0.09
SMAD4-211ENST00000590499 FANCIQ9NVI1 1328 aa14.48□□□□□ -0.09
SMAD4-211ENST00000590499 CACNA1FO60840 1977 aa14.48□□□□□ -0.09
SMAD4-211ENST00000590499 TCIRG1Q13488 830 aa14.48□□□□□ -0.09
SMAD4-211ENST00000590499 CRY2Q49AN0 593 aa14.48□□□□□ -0.09
SMAD4-211ENST00000590499 ERFEQ4G0M1 354 aa14.48□□□□□ -0.09
SMAD4-211ENST00000590499 HSP90AB3PQ58FF7 597 aa14.48□□□□□ -0.09
SMAD4-211ENST00000590499 PLBD2Q8NHP8 589 aa14.48□□□□□ -0.09
SMAD4-211ENST00000590499 ZNF622Q969S3 477 aaKnown RBP eCLIP14.48□□□□□ -0.09
SMAD4-211ENST00000590499 MASTLQ96GX5 879 aa14.48□□□□□ -0.09
SMAD4-211ENST00000590499 SALL2Q9Y467 1007 aaPredicted RBP14.48□□□□□ -0.09
SMAD4-211ENST00000590499 CCDC88AQ3V6T2 1871 aa14.48□□□□□ -0.09
SMAD4-211ENST00000590499 LAMB2P55268 1798 aa14.47□□□□□ -0.09
SMAD4-211ENST00000590499 CCER2I3L3R5 266 aa14.47□□□□□ -0.09
SMAD4-211ENST00000590499 EVI5O60447 810 aa14.47□□□□□ -0.09
SMAD4-211ENST00000590499 NLRP10Q86W26 655 aa14.47□□□□□ -0.09
SMAD4-211ENST00000590499 CNKSR1Q969H4 720 aa14.47□□□□□ -0.09
SMAD4-211ENST00000590499 RNF123Q5XPI4 1314 aa14.46□□□□□ -0.09
SMAD4-211ENST00000590499 NPR1P16066 1061 aa14.46□□□□□ -0.09
SMAD4-211ENST00000590499 CCDC30Q5VVM6 783 aa14.46□□□□□ -0.09
SMAD4-211ENST00000590499 PRPF40BQ6NWY9 871 aaKnown RBP14.46□□□□□ -0.09
SMAD4-211ENST00000590499 PPP1R42Q7Z4L9 355 aa14.46□□□□□ -0.09
SMAD4-211ENST00000590499 ISCA1Q9BUE6 129 aa14.46□□□□□ -0.09
SMAD4-211ENST00000590499 PHAXQ9H814 394 aaKnown RBP14.46□□□□□ -0.09
SMAD4-211ENST00000590499 DICER1Q9UPY3 1922 aaKnown RBP14.45□□□□□ -0.1
SMAD4-211ENST00000590499 NFKBIEO00221 500 aa14.45□□□□□ -0.1
SMAD4-211ENST00000590499 GTF2E1P29083 439 aaPredicted RBP14.45□□□□□ -0.1
SMAD4-211ENST00000590499 PRELPP51888 382 aa14.45□□□□□ -0.1
SMAD4-211ENST00000590499 TWISTNBQ3B726 338 aaPredicted RBP14.45□□□□□ -0.1
SMAD4-211ENST00000590499 SLC10A5Q5PT55 438 aa14.45□□□□□ -0.1
SMAD4-211ENST00000590499 DDX60Q8IY21 1712 aaKnown RBP14.45□□□□□ -0.1
SMAD4-211ENST00000590499 C7orf43Q8WVR3 580 aa14.45□□□□□ -0.1
SMAD4-211ENST00000590499 UTP14AQ9BVJ6 771 aaKnown RBP14.45□□□□□ -0.1
SMAD4-211ENST00000590499 CHMP4AQ9BY43 222 aa14.45□□□□□ -0.1
SMAD4-211ENST00000590499 C21orf2O43822 256 aa14.44□□□□□ -0.1
SMAD4-211ENST00000590499 RASSF7Q02833 373 aa14.44□□□□□ -0.1
SMAD4-211ENST00000590499 C9orf131Q5VYM1 1079 aa14.44□□□□□ -0.1
SMAD4-211ENST00000590499 TIAM2Q8IVF5 1701 aa14.44□□□□□ -0.1
SMAD4-211ENST00000590499 SNED1Q8TER0 1413 aa14.43□□□□□ -0.1
SMAD4-211ENST00000590499 HOXA10P31260 410 aaPredicted RBP14.43□□□□□ -0.1
SMAD4-211ENST00000590499 TRIM28Q13263 835 aaKnown RBP14.43□□□□□ -0.1
SMAD4-211ENST00000590499 ADAM33Q9BZ11 813 aa14.43□□□□□ -0.1
SMAD4-211ENST00000590499 NBPF3Q9H094 633 aa14.43□□□□□ -0.1
SMAD4-211ENST00000590499 LTBP3Q9NS15 1303 aa14.42□□□□□ -0.1
SMAD4-211ENST00000590499 VAMP4O75379 141 aa14.42□□□□□ -0.1
SMAD4-211ENST00000590499 SH3TC1Q8TE82 1336 aa14.41□□□□□ -0.1
SMAD4-211ENST00000590499 ATP5J2-PTCD1G3V325 749 aa14.41□□□□□ -0.1
SMAD4-211ENST00000590499 LMNB1P20700 586 aa14.41□□□□□ -0.1
SMAD4-211ENST00000590499 EXOSC9Q06265 439 aaKnown RBP14.41□□□□□ -0.1
SMAD4-211ENST00000590499 CAMK2BQ13554 666 aa14.41□□□□□ -0.1
SMAD4-211ENST00000590499 SOGA3Q5TF21 947 aa14.41□□□□□ -0.1
SMAD4-211ENST00000590499 SYNE4Q8N205 404 aa14.41□□□□□ -0.1
SMAD4-211ENST00000590499 ZDHHC16Q969W1 377 aa14.41□□□□□ -0.1
SMAD4-211ENST00000590499 RNF181Q9P0P0 153 aa14.41□□□□□ -0.1
SMAD4-211ENST00000590499 TCERG1O14776 1098 aaKnown RBP14.4□□□□□ -0.1
SMAD4-211ENST00000590499 ITGBL1O95965 494 aaPredicted RBP14.4□□□□□ -0.1
SMAD4-211ENST00000590499 ALDH1B1P30837 517 aa14.4□□□□□ -0.1
SMAD4-211ENST00000590499 G2E3Q7L622 706 aa14.4□□□□□ -0.1
SMAD4-211ENST00000590499 RIC3Q7Z5B4 369 aa14.4□□□□□ -0.1
SMAD4-211ENST00000590499 STK31Q9BXU1 1019 aa14.4□□□□□ -0.1
SMAD4-211ENST00000590499 MYH16Q9H6N6 1097 aa14.4□□□□□ -0.1
SMAD4-211ENST00000590499 TRMT112Q9UI30 125 aaKnown RBP14.4□□□□□ -0.1
SMAD4-211ENST00000590499 ZC3H4Q9UPT8 1303 aaKnown RBP14.4□□□□□ -0.1
SMAD4-211ENST00000590499 HCLS1P14317 486 aaPredicted RBP14.39□□□□□ -0.11
SMAD4-211ENST00000590499 OLFM4Q6UX06 510 aa14.39□□□□□ -0.11
SMAD4-211ENST00000590499 RPGRQ92834 1020 aaKnown RBP14.39□□□□□ -0.11
SMAD4-211ENST00000590499 NLRP3Q96P20 1036 aa14.39□□□□□ -0.11
SMAD4-211ENST00000590499 CRAMP1Q96RY5 1269 aa14.39□□□□□ -0.11
SMAD4-211ENST00000590499 TAOK3Q9H2K8 898 aa14.39□□□□□ -0.11
SMAD4-211ENST00000590499 GPBP1L1Q9HC44 474 aaPredicted RBP14.39□□□□□ -0.11
SMAD4-211ENST00000590499 TAF1P21675 1872 aa14.39□□□□□ -0.11
SMAD4-211ENST00000590499 DDX58O95786 925 aaKnown RBP14.38□□□□□ -0.11
SMAD4-211ENST00000590499 CCDC93Q567U6 631 aa14.38□□□□□ -0.11
SMAD4-211ENST00000590499 DIEXFQ68CQ4 756 aaKnown RBP14.38□□□□□ -0.11
SMAD4-211ENST00000590499 KSR2Q6VAB6 950 aa14.38□□□□□ -0.11
SMAD4-211ENST00000590499 ZNF526Q8TF50 670 aaPredicted RBP14.38□□□□□ -0.11
SMAD4-211ENST00000590499 ZNF428Q96B54 188 aa14.38□□□□□ -0.11
SMAD4-211ENST00000590499 MYD88Q99836 296 aa14.38□□□□□ -0.11
SMAD4-211ENST00000590499 METTL22Q9BUU2 404 aaPredicted RBP14.38□□□□□ -0.11
SMAD4-211ENST00000590499 PI4KAP2A4QPH2 592 aa14.37□□□□□ -0.11
SMAD4-211ENST00000590499 SLC51AQ86UW1 340 aa14.37□□□□□ -0.11
SMAD4-211ENST00000590499 PI4KAP1Q8N8J0 262 aa14.37□□□□□ -0.11
SMAD4-211ENST00000590499 CCDC191Q8NCU4 936 aa14.37□□□□□ -0.11
SMAD4-211ENST00000590499 FAM89AQ96GI7 184 aa14.37□□□□□ -0.11
SMAD4-211ENST00000590499 RBM17Q96I25 401 aaKnown RBP14.37□□□□□ -0.11
SMAD4-211ENST00000590499 MAP3K2Q9Y2U5 619 aa14.37□□□□□ -0.11
SMAD4-211ENST00000590499 ABCC4O15439 1325 aa14.37□□□□□ -0.11
SMAD4-211ENST00000590499 COL4A1P02462 1669 aa14.36□□□□□ -0.11
SMAD4-211ENST00000590499 LRRC37AA6NMS7 1700 aa14.36□□□□□ -0.11
SMAD4-211ENST00000590499 IGKV5-2P06315 115 aa14.36□□□□□ -0.11
SMAD4-211ENST00000590499 FLIIQ13045 1269 aa14.36□□□□□ -0.11
SMAD4-211ENST00000590499 ZBTB38Q8NAP3 1195 aaPredicted RBP14.36□□□□□ -0.11
SMAD4-211ENST00000590499 E9PSI1 815 aa14.35□□□□□ -0.11
SMAD4-211ENST00000590499 FKBP4Q02790 459 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMAD4-211ENST00000590499 SF3B3Q15393 1217 aaKnown RBP14.35□□□□□ -0.11
SMAD4-211ENST00000590499 CC2D2BQ6DHV5 1058 aa14.35□□□□□ -0.11
SMAD4-211ENST00000590499 RTKN2Q8IZC4 609 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms