RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 VGLL2Q8N8G2 317 aa21.34■■□□□ 1.01
CXXC1-212ENST00000589940 PARP3Q9Y6F1 533 aa21.33■■□□□ 1.01
CXXC1-212ENST00000589940 NRXN2Q9P2S2 1712 aa21.33■■□□□ 1.01
CXXC1-212ENST00000589940 A0A1B0GUL7 405 aa21.33■■□□□ 1
CXXC1-212ENST00000589940 TIMM10P62072 90 aa21.33■■□□□ 1
CXXC1-212ENST00000589940 DDX46Q7L014 1031 aaKnown RBP21.33■■□□□ 1
CXXC1-212ENST00000589940 NEUROD6Q96NK8 337 aa21.33■■□□□ 1
CXXC1-212ENST00000589940 DBNDD2Q9BQY9 259 aa21.33■■□□□ 1
CXXC1-212ENST00000589940 COL4A1P02462 1669 aa21.33■■□□□ 1
CXXC1-212ENST00000589940 PDE8BO95263 885 aa21.32■■□□□ 1
CXXC1-212ENST00000589940 CRY2Q49AN0 593 aa21.32■■□□□ 1
CXXC1-212ENST00000589940 BSDC1Q9NW68 430 aaPredicted RBP21.32■■□□□ 1
CXXC1-212ENST00000589940 CELF1Q92879 486 aaKnown RBP21.32■■□□□ 1
CXXC1-212ENST00000589940 CDC45O75419 566 aa21.31■■□□□ 1
CXXC1-212ENST00000589940 RPS8P62241 208 aaKnown RBP21.31■■□□□ 1
CXXC1-212ENST00000589940 ATP2B3Q16720 1220 aa21.31■■□□□ 1
CXXC1-212ENST00000589940 UPF1Q92900 1129 aaKnown RBP eCLIP21.31■■□□□ 1
CXXC1-212ENST00000589940 SPEF2Q9C093 1822 aa21.3■■□□□ 1
CXXC1-212ENST00000589940 KLRG2A4D1S0 409 aaPredicted RBP21.29■■□□□ 1
CXXC1-212ENST00000589940 TRIM6-TRIM34B2RNG4 842 aa21.29■■□□□ 1
CXXC1-212ENST00000589940 RPGRQ92834 1020 aaKnown RBP21.29■■□□□ 1
CXXC1-212ENST00000589940 BRIP1Q9BX63 1249 aa21.29■■□□□ 1
CXXC1-212ENST00000589940 ATP5JP18859 108 aa21.29■■□□□ 1
CXXC1-212ENST00000589940 PUM3Q15397 648 aaKnown RBP21.29■■□□□ 1
CXXC1-212ENST00000589940 CHRNDQ07001 517 aa21.28■■□□□ 1
CXXC1-212ENST00000589940 TBC1D9Q6ZT07 1266 aa21.28■■□□□ 1
CXXC1-212ENST00000589940 HELBQ8NG08 1087 aaPredicted RBP21.28■■□□□ 1
CXXC1-212ENST00000589940 PDGFDQ9GZP0 370 aaPredicted RBP21.28■■□□□ 1
CXXC1-212ENST00000589940 TAF1P21675 1872 aa21.28■■□□□ 1
CXXC1-212ENST00000589940 GRAPQ13588 217 aa21.28■■□□□ 1
CXXC1-212ENST00000589940 GRAPLQ8TC17 118 aaPredicted RBP21.28■■□□□ 1
CXXC1-212ENST00000589940 RILPL2Q969X0 211 aa21.28■■□□□ 1
CXXC1-212ENST00000589940 XAGE2Q96GT9 111 aa21.28■■□□□ 1
CXXC1-212ENST00000589940 SLC16A10Q8TF71 515 aa21.27■■□□□ 1
CXXC1-212ENST00000589940 FGFR2P21802 821 aa21.27■□□□□ 0.99
CXXC1-212ENST00000589940 CNTROBQ8N137 903 aa21.27■□□□□ 0.99
CXXC1-212ENST00000589940 LPIN2Q92539 896 aa21.27■□□□□ 0.99
CXXC1-212ENST00000589940 MINPP1Q9UNW1 487 aa21.27■□□□□ 0.99
CXXC1-212ENST00000589940 RBM19Q9Y4C8 960 aaKnown RBP21.27■□□□□ 0.99
CXXC1-212ENST00000589940 TAF5LO75529 589 aa21.26■□□□□ 0.99
CXXC1-212ENST00000589940 SEC24BO95487 1268 aa21.26■□□□□ 0.99
CXXC1-212ENST00000589940 MAP4K4O95819 1239 aaPredicted RBP21.26■□□□□ 0.99
CXXC1-212ENST00000589940 ADORA1P30542 326 aa21.26■□□□□ 0.99
CXXC1-212ENST00000589940 HOXA10P31260 410 aaPredicted RBP21.26■□□□□ 0.99
CXXC1-212ENST00000589940 RBM17Q96I25 401 aaKnown RBP21.26■□□□□ 0.99
CXXC1-212ENST00000589940 BOLA2Q9H3K6 86 aa21.26■□□□□ 0.99
CXXC1-212ENST00000589940 GORABQ5T7V8 394 aa21.25■□□□□ 0.99
CXXC1-212ENST00000589940 ANKRD31Q8N7Z5 1873 aa21.25■□□□□ 0.99
CXXC1-212ENST00000589940 CCDC158Q5M9N0 1113 aa21.25■□□□□ 0.99
CXXC1-212ENST00000589940 CASC1Q6TDU7 716 aa21.25■□□□□ 0.99
CXXC1-212ENST00000589940 PDE6BP35913 854 aa21.24■□□□□ 0.99
CXXC1-212ENST00000589940 SLC5A1P13866 664 aa21.24■□□□□ 0.99
CXXC1-212ENST00000589940 EVI5LQ96CN4 794 aa21.24■□□□□ 0.99
CXXC1-212ENST00000589940 HAUS7Q99871 368 aa21.23■□□□□ 0.99
CXXC1-212ENST00000589940 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.23■□□□□ 0.99
CXXC1-212ENST00000589940 CRAMP1Q96RY5 1269 aa21.23■□□□□ 0.99
CXXC1-212ENST00000589940 ANKRD2Q9GZV1 360 aa21.23■□□□□ 0.99
CXXC1-212ENST00000589940 IFIT1P09914 478 aaKnown RBP21.22■□□□□ 0.99
CXXC1-212ENST00000589940 TTC39AQ5SRH9 613 aa21.22■□□□□ 0.99
CXXC1-212ENST00000589940 ARAP2Q8WZ64 1704 aa21.22■□□□□ 0.99
CXXC1-212ENST00000589940 A0A1B0GUL6 1792 aa21.21■□□□□ 0.99
CXXC1-212ENST00000589940 SNAP23O00161 211 aa21.21■□□□□ 0.99
CXXC1-212ENST00000589940 SRGNP10124 158 aa21.21■□□□□ 0.99
CXXC1-212ENST00000589940 UBE4AQ14139 1066 aa21.21■□□□□ 0.99
CXXC1-212ENST00000589940 EIF5BO60841 1220 aaKnown RBP21.2■□□□□ 0.98
CXXC1-212ENST00000589940 BBOX1O75936 387 aa21.2■□□□□ 0.98
CXXC1-212ENST00000589940 NPR1P16066 1061 aa21.2■□□□□ 0.98
CXXC1-212ENST00000589940 CHMLP26374 656 aa21.2■□□□□ 0.98
CXXC1-212ENST00000589940 ZNF512BQ96KM6 892 aaPredicted RBP21.2■□□□□ 0.98
CXXC1-212ENST00000589940 UPF2Q9HAU5 1272 aaKnown RBP21.2■□□□□ 0.98
CXXC1-212ENST00000589940 AK9Q5TCS8 1911 aa21.2■□□□□ 0.98
CXXC1-212ENST00000589940 DNAJC2Q99543 621 aaKnown RBP21.2■□□□□ 0.98
CXXC1-212ENST00000589940 MFAP1P55081 439 aaKnown RBP21.19■□□□□ 0.98
CXXC1-212ENST00000589940 CCDC102BQ68D86 513 aa21.19■□□□□ 0.98
CXXC1-212ENST00000589940 NDUFB9Q9Y6M9 179 aa21.18■□□□□ 0.98
CXXC1-212ENST00000589940 PHKA1P46020 1223 aa21.17■□□□□ 0.98
CXXC1-212ENST00000589940 TMC4Q7Z404 712 aa21.17■□□□□ 0.98
CXXC1-212ENST00000589940 MASTLQ96GX5 879 aa21.17■□□□□ 0.98
CXXC1-212ENST00000589940 COL11A2P13942 1736 aaPredicted RBP21.17■□□□□ 0.98
CXXC1-212ENST00000589940 UQCRFS1P1P0C7P4 283 aa21.17■□□□□ 0.98
CXXC1-212ENST00000589940 ARID4AP29374 1257 aaPredicted RBP21.17■□□□□ 0.98
CXXC1-212ENST00000589940 EDC3Q96F86 508 aaKnown RBP21.17■□□□□ 0.98
CXXC1-212ENST00000589940 PAG1Q9NWQ8 432 aa21.17■□□□□ 0.98
CXXC1-212ENST00000589940 ALDH1B1P30837 517 aa21.16■□□□□ 0.98
CXXC1-212ENST00000589940 KCNJ4P48050 445 aa21.16■□□□□ 0.98
CXXC1-212ENST00000589940 FSD1Q9BTV5 496 aa21.16■□□□□ 0.98
CXXC1-212ENST00000589940 SCARF1Q14162 830 aa21.16■□□□□ 0.98
CXXC1-212ENST00000589940 R3HDM1Q15032 1099 aaKnown RBP21.16■□□□□ 0.98
CXXC1-212ENST00000589940 C2CD5Q86YS7 1000 aa21.16■□□□□ 0.98
CXXC1-212ENST00000589940 XDHP47989 1333 aa21.15■□□□□ 0.98
CXXC1-212ENST00000589940 H0YIN7 160 aa21.15■□□□□ 0.98
CXXC1-212ENST00000589940 GOLIM4O00461 696 aa21.15■□□□□ 0.98
CXXC1-212ENST00000589940 ESYT1Q9BSJ8 1104 aa21.15■□□□□ 0.98
CXXC1-212ENST00000589940 ANKIB1Q9P2G1 1089 aa21.15■□□□□ 0.98
CXXC1-212ENST00000589940 C10orf71Q711Q0 1435 aa21.15■□□□□ 0.98
CXXC1-212ENST00000589940 ZNF804BA4D1E1 1349 aa21.15■□□□□ 0.98
CXXC1-212ENST00000589940 WTIPA6NIX2 430 aaPredicted RBP21.14■□□□□ 0.98
CXXC1-212ENST00000589940 HIP1O00291 1037 aa21.14■□□□□ 0.98
CXXC1-212ENST00000589940 PPEF1O14829 653 aaPredicted RBP21.14■□□□□ 0.98
CXXC1-212ENST00000589940 ZBTB7AO95365 584 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms