RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 GPKOWQ92917 476 aaPredicted RBP eCLIP7.66□□□□□ -1.18
LINC01539-202ENST00000589293 RTCBQ9Y3I0 505 aaKnown RBP7.66□□□□□ -1.18
LINC01539-202ENST00000589293 EMILIN1Q9Y6C2 1016 aa7.66□□□□□ -1.18
LINC01539-202ENST00000589293 RGPD2P0DJD1 1756 aa7.66□□□□□ -1.18
LINC01539-202ENST00000589293 TUBGCP6Q96RT7 1819 aa7.66□□□□□ -1.18
LINC01539-202ENST00000589293 HSPA6P17066 643 aa7.65□□□□□ -1.18
LINC01539-202ENST00000589293 NR1H3Q13133 447 aa7.65□□□□□ -1.18
LINC01539-202ENST00000589293 C16orf71Q8IYS4 520 aaPredicted RBP7.65□□□□□ -1.18
LINC01539-202ENST00000589293 NLGN1Q8N2Q7 840 aa7.65□□□□□ -1.18
LINC01539-202ENST00000589293 ADAM32Q8TC27 787 aa7.65□□□□□ -1.18
LINC01539-202ENST00000589293 C1QTNF2Q9BXJ5 285 aa7.65□□□□□ -1.18
LINC01539-202ENST00000589293 PRKD2Q9BZL6 878 aa7.65□□□□□ -1.18
LINC01539-202ENST00000589293 CCDC87Q9NVE4 849 aa7.65□□□□□ -1.18
LINC01539-202ENST00000589293 ZNF330Q9Y3S2 320 aaPredicted RBP7.65□□□□□ -1.18
LINC01539-202ENST00000589293 GPSM3Q9Y4H4 160 aa7.65□□□□□ -1.18
LINC01539-202ENST00000589293 KIF20BQ96Q89 1820 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 C4BP0C0L5 1744 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 COL24A1Q17RW2 1714 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 SHANK3Q9BYB0 1731 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 WASHC2AQ641Q2 1341 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 ZBTB24O43167 697 aaPredicted RBP7.64□□□□□ -1.19
LINC01539-202ENST00000589293 MMP10P09238 476 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 RFC4P35249 363 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 TNNT2P45379 298 aaPredicted RBP7.64□□□□□ -1.19
LINC01539-202ENST00000589293 ERFEQ4G0M1 354 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 PLEKHO1Q53GL0 409 aaPredicted RBP7.64□□□□□ -1.19
LINC01539-202ENST00000589293 C1orf141Q5JVX7 400 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 TRIM67Q6ZTA4 783 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 ERICH6Q7L0X2 663 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 PRM3Q9NNZ6 103 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 BCS1LQ9Y276 419 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 PARP3Q9Y6F1 533 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 UTRNP46939 3433 aa7.64□□□□□ -1.19
LINC01539-202ENST00000589293 MAGEB6P1A0A0J9YX57 407 aa7.63□□□□□ -1.19
LINC01539-202ENST00000589293 PHKG2P15735 406 aa7.63□□□□□ -1.19
LINC01539-202ENST00000589293 WNT7BP56706 349 aa7.63□□□□□ -1.19
LINC01539-202ENST00000589293 CABP4P57796 275 aa7.63□□□□□ -1.19
LINC01539-202ENST00000589293 TGFB2P61812 414 aa7.63□□□□□ -1.19
LINC01539-202ENST00000589293 ARHGAP27Q6ZUM4 889 aa7.63□□□□□ -1.19
LINC01539-202ENST00000589293 LINC00116Q8NCU8 138 aa7.63□□□□□ -1.19
LINC01539-202ENST00000589293 ARHGAP9Q9BRR9 750 aa7.63□□□□□ -1.19
LINC01539-202ENST00000589293 CARD14Q9BXL6 1004 aa7.63□□□□□ -1.19
LINC01539-202ENST00000589293 ALG2Q9H553 416 aa7.63□□□□□ -1.19
LINC01539-202ENST00000589293 PKD2L1Q9P0L9 805 aa7.63□□□□□ -1.19
LINC01539-202ENST00000589293 ASAP1Q9ULH1 1129 aa7.63□□□□□ -1.19
LINC01539-202ENST00000589293 ERVV-2B6SEH9 535 aa7.62□□□□□ -1.19
LINC01539-202ENST00000589293 SIAH2O43255 324 aa7.62□□□□□ -1.19
LINC01539-202ENST00000589293 PTK2Q05397 1052 aa7.62□□□□□ -1.19
LINC01539-202ENST00000589293 TRIM26Q12899 539 aaPredicted RBP7.62□□□□□ -1.19
LINC01539-202ENST00000589293 AMOTQ4VCS5 1084 aa7.62□□□□□ -1.19
LINC01539-202ENST00000589293 RC3H1Q5TC82 1133 aaKnown RBP7.62□□□□□ -1.19
LINC01539-202ENST00000589293 BPHLQ86WA6 291 aaPredicted RBP7.62□□□□□ -1.19
LINC01539-202ENST00000589293 DCAF5Q96JK2 942 aa7.62□□□□□ -1.19
LINC01539-202ENST00000589293 V9GY48 417 aaPredicted RBP7.62□□□□□ -1.19
LINC01539-202ENST00000589293 MTHFSP49914 203 aa7.61□□□□□ -1.19
LINC01539-202ENST00000589293 ITPK1Q13572 414 aa7.61□□□□□ -1.19
LINC01539-202ENST00000589293 WASHC4Q2M389 1173 aa7.61□□□□□ -1.19
LINC01539-202ENST00000589293 ZNF697Q5TEC3 545 aa7.61□□□□□ -1.19
LINC01539-202ENST00000589293 ZNF530Q6P9A1 599 aaPredicted RBP7.61□□□□□ -1.19
LINC01539-202ENST00000589293 SMIM5Q71RC9 77 aa7.61□□□□□ -1.19
LINC01539-202ENST00000589293 ZNF598Q86UK7 904 aaKnown RBP7.61□□□□□ -1.19
LINC01539-202ENST00000589293 PNMA1Q8ND90 353 aa7.61□□□□□ -1.19
LINC01539-202ENST00000589293 GLMNQ92990 594 aa7.61□□□□□ -1.19
LINC01539-202ENST00000589293 ATG3Q9NT62 314 aa7.61□□□□□ -1.19
LINC01539-202ENST00000589293 POLKQ9UBT6 870 aa7.61□□□□□ -1.19
LINC01539-202ENST00000589293 TAF1LQ8IZX4 1826 aa7.61□□□□□ -1.19
LINC01539-202ENST00000589293 PLEKHG2Q9H7P9 1386 aa7.6□□□□□ -1.19
LINC01539-202ENST00000589293 ITGB4P16144 1822 aa7.6□□□□□ -1.19
LINC01539-202ENST00000589293 A0A0G2JLW4 131 aa7.6□□□□□ -1.19
LINC01539-202ENST00000589293 WNT7AO00755 349 aa7.6□□□□□ -1.19
LINC01539-202ENST00000589293 GDF9O60383 454 aa7.6□□□□□ -1.19
LINC01539-202ENST00000589293 TOMM70O94826 608 aa7.6□□□□□ -1.19
LINC01539-202ENST00000589293 CD2BP2O95400 341 aaKnown RBP7.6□□□□□ -1.19
LINC01539-202ENST00000589293 EIF4A2Q14240 407 aaKnown RBP7.6□□□□□ -1.19
LINC01539-202ENST00000589293 MORC1Q86VD1 984 aa7.6□□□□□ -1.19
LINC01539-202ENST00000589293 TRMT44Q8IYL2 757 aaKnown RBP7.6□□□□□ -1.19
LINC01539-202ENST00000589293 MRGPRX2Q96LB1 330 aa7.6□□□□□ -1.19
LINC01539-202ENST00000589293 UCN2Q96RP3 112 aa7.6□□□□□ -1.19
LINC01539-202ENST00000589293 PIM2Q9P1W9 311 aa7.6□□□□□ -1.19
LINC01539-202ENST00000589293 TLL2Q9Y6L7 1015 aa7.6□□□□□ -1.19
LINC01539-202ENST00000589293 PKD1L3Q7Z443 1732 aa7.6□□□□□ -1.19
LINC01539-202ENST00000589293 ADCY9O60503 1353 aa7.59□□□□□ -1.19
LINC01539-202ENST00000589293 KDM2BQ8NHM5 1336 aa7.59□□□□□ -1.19
LINC01539-202ENST00000589293 CNTNAP4Q9C0A0 1308 aa7.59□□□□□ -1.19
LINC01539-202ENST00000589293 PTCD1O75127 700 aaKnown RBP7.59□□□□□ -1.19
LINC01539-202ENST00000589293 RPS6KA4O75676 772 aa7.59□□□□□ -1.19
LINC01539-202ENST00000589293 EIF4G2P78344 907 aaKnown RBP eCLIP7.59□□□□□ -1.19
LINC01539-202ENST00000589293 DALRD3Q5D0E6 543 aaKnown RBP7.59□□□□□ -1.19
LINC01539-202ENST00000589293 UBR3Q6ZT12 1888 aa7.59□□□□□ -1.19
LINC01539-202ENST00000589293 TOGARAM1Q9Y4F4 1720 aa7.58□□□□□ -1.2
LINC01539-202ENST00000589293 DPEP1P16444 411 aa7.58□□□□□ -1.2
LINC01539-202ENST00000589293 VARSP26640 1264 aaKnown RBP7.58□□□□□ -1.2
LINC01539-202ENST00000589293 AGERQ15109 404 aa7.58□□□□□ -1.2
LINC01539-202ENST00000589293 HDGFL1Q5TGJ6 251 aa7.58□□□□□ -1.2
LINC01539-202ENST00000589293 NPM2Q86SE8 214 aaKnown RBP7.58□□□□□ -1.2
LINC01539-202ENST00000589293 ZBTB33Q86T24 672 aa7.58□□□□□ -1.2
LINC01539-202ENST00000589293 AMIGO3Q86WK7 504 aa7.58□□□□□ -1.2
LINC01539-202ENST00000589293 PCGF6Q9BYE7 350 aa7.58□□□□□ -1.2
LINC01539-202ENST00000589293 KNSTRNQ9Y448 316 aa7.58□□□□□ -1.2
LINC01539-202ENST00000589293 CICQ96RK0 1608 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms