RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 CSF1RP07333 972 aa20.93■□□□□ 0.94
ERCC2-211ENST00000588652 BLOC1S2Q6QNY1 142 aa20.93■□□□□ 0.94
ERCC2-211ENST00000588652 CEP126Q9P2H0 1117 aa20.93■□□□□ 0.94
ERCC2-211ENST00000588652 GOLIM4O00461 696 aa20.92■□□□□ 0.94
ERCC2-211ENST00000588652 SYT1P21579 422 aa20.92■□□□□ 0.94
ERCC2-211ENST00000588652 ME3Q16798 604 aa20.92■□□□□ 0.94
ERCC2-211ENST00000588652 CCDC129Q6ZRS4 1044 aa20.92■□□□□ 0.94
ERCC2-211ENST00000588652 ZBTB1Q9Y2K1 713 aa20.92■□□□□ 0.94
ERCC2-211ENST00000588652 STX6O43752 255 aa20.92■□□□□ 0.94
ERCC2-211ENST00000588652 ANKRD36CQ5JPF3 1778 aa20.92■□□□□ 0.94
ERCC2-211ENST00000588652 SH3TC1Q8TE82 1336 aa20.92■□□□□ 0.94
ERCC2-211ENST00000588652 DOT1LQ8TEK3 1739 aa20.92■□□□□ 0.94
ERCC2-211ENST00000588652 TSPY26PQ9H489 355 aa20.92■□□□□ 0.94
ERCC2-211ENST00000588652 MSNP26038 577 aaKnown RBP20.91■□□□□ 0.94
ERCC2-211ENST00000588652 ST3GAL1Q11201 340 aa20.91■□□□□ 0.94
ERCC2-211ENST00000588652 NLRP10Q86W26 655 aa20.91■□□□□ 0.94
ERCC2-211ENST00000588652 TPCN1Q9ULQ1 816 aa20.91■□□□□ 0.94
ERCC2-211ENST00000588652 CDHR2Q9BYE9 1310 aa20.91■□□□□ 0.94
ERCC2-211ENST00000588652 RPS6KB1P23443 525 aa20.9■□□□□ 0.94
ERCC2-211ENST00000588652 GPTP24298 496 aa20.9■□□□□ 0.94
ERCC2-211ENST00000588652 TICAM2Q86XR7 235 aa20.9■□□□□ 0.94
ERCC2-211ENST00000588652 CCDC85AQ96PX6 553 aaPredicted RBP20.9■□□□□ 0.94
ERCC2-211ENST00000588652 CNPY2Q9Y2B0 182 aa20.9■□□□□ 0.94
ERCC2-211ENST00000588652 NUP98P52948 1817 aa20.9■□□□□ 0.94
ERCC2-211ENST00000588652 IFIT1P09914 478 aaKnown RBP20.9■□□□□ 0.94
ERCC2-211ENST00000588652 TPRNQ4KMQ1 711 aa20.9■□□□□ 0.94
ERCC2-211ENST00000588652 HSP90AB3PQ58FF7 597 aa20.9■□□□□ 0.94
ERCC2-211ENST00000588652 SYNE4Q8N205 404 aa20.9■□□□□ 0.94
ERCC2-211ENST00000588652 ALDH8A1Q9H2A2 487 aaPredicted RBP20.9■□□□□ 0.94
ERCC2-211ENST00000588652 SPEF2Q9C093 1822 aa20.9■□□□□ 0.94
ERCC2-211ENST00000588652 RNF214Q8ND24 703 aa20.89■□□□□ 0.94
ERCC2-211ENST00000588652 NOL7Q9UMY1 257 aaKnown RBP20.89■□□□□ 0.94
ERCC2-211ENST00000588652 PHF14O94880 888 aa20.89■□□□□ 0.93
ERCC2-211ENST00000588652 F13A1P00488 732 aa20.89■□□□□ 0.93
ERCC2-211ENST00000588652 GJB2P29033 226 aa20.89■□□□□ 0.93
ERCC2-211ENST00000588652 IFIT5Q13325 482 aaKnown RBP20.89■□□□□ 0.93
ERCC2-211ENST00000588652 TCEANC2Q96MN5 208 aa20.89■□□□□ 0.93
ERCC2-211ENST00000588652 U3KPZ7 1027 aaPredicted RBP20.89■□□□□ 0.93
ERCC2-211ENST00000588652 ADAMTS2O95450 1211 aa20.88■□□□□ 0.93
ERCC2-211ENST00000588652 KRT32Q14532 448 aa20.88■□□□□ 0.93
ERCC2-211ENST00000588652 ANKRD1Q15327 319 aa20.88■□□□□ 0.93
ERCC2-211ENST00000588652 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.88■□□□□ 0.93
ERCC2-211ENST00000588652 CDCA7Q9BWT1 371 aaPredicted RBP20.88■□□□□ 0.93
ERCC2-211ENST00000588652 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.88■□□□□ 0.93
ERCC2-211ENST00000588652 MYH3P11055 1940 aa20.88■□□□□ 0.93
ERCC2-211ENST00000588652 NRAPQ86VF7 1730 aa20.88■□□□□ 0.93
ERCC2-211ENST00000588652 HELLSQ9NRZ9 838 aa20.88■□□□□ 0.93
ERCC2-211ENST00000588652 AKAP2Q9Y2D5 859 aa20.88■□□□□ 0.93
ERCC2-211ENST00000588652 SPATA31A1Q5TZJ5 1347 aa20.87■□□□□ 0.93
ERCC2-211ENST00000588652 TOB2Q14106 344 aaPredicted RBP20.87■□□□□ 0.93
ERCC2-211ENST00000588652 TAF7LQ5H9L4 462 aa20.87■□□□□ 0.93
ERCC2-211ENST00000588652 NECAB1Q8N987 351 aa20.87■□□□□ 0.93
ERCC2-211ENST00000588652 ATP6V1DQ9Y5K8 247 aa20.87■□□□□ 0.93
ERCC2-211ENST00000588652 LTBP4Q8N2S1 1624 aa20.87■□□□□ 0.93
ERCC2-211ENST00000588652 IL6STP40189 918 aaPredicted RBP20.87■□□□□ 0.93
ERCC2-211ENST00000588652 SLFNL1Q499Z3 407 aa20.87■□□□□ 0.93
ERCC2-211ENST00000588652 CYP21A2P08686 494 aa20.86■□□□□ 0.93
ERCC2-211ENST00000588652 ZMYM1Q5SVZ6 1142 aa20.86■□□□□ 0.93
ERCC2-211ENST00000588652 TTLL11Q8NHH1 800 aa20.86■□□□□ 0.93
ERCC2-211ENST00000588652 PHLPP1O60346 1717 aa20.86■□□□□ 0.93
ERCC2-211ENST00000588652 DDB1Q16531 1140 aa20.86■□□□□ 0.93
ERCC2-211ENST00000588652 XAGE2Q96GT9 111 aa20.86■□□□□ 0.93
ERCC2-211ENST00000588652 THRAP3Q9Y2W1 955 aaKnown RBP20.86■□□□□ 0.93
ERCC2-211ENST00000588652 ERVV-1B6SEH8 477 aa20.85■□□□□ 0.93
ERCC2-211ENST00000588652 DTNBO60941 627 aa20.85■□□□□ 0.93
ERCC2-211ENST00000588652 ADORA1P30542 326 aa20.85■□□□□ 0.93
ERCC2-211ENST00000588652 CCDC158Q5M9N0 1113 aa20.85■□□□□ 0.93
ERCC2-211ENST00000588652 NEK1Q96PY6 1258 aa20.85■□□□□ 0.93
ERCC2-211ENST00000588652 OFD1O75665 1012 aa20.85■□□□□ 0.93
ERCC2-211ENST00000588652 CCDC183Q5T5S1 534 aa20.85■□□□□ 0.93
ERCC2-211ENST00000588652 DZIP3Q86Y13 1208 aaKnown RBP20.85■□□□□ 0.93
ERCC2-211ENST00000588652 GREM2Q9H772 168 aa20.85■□□□□ 0.93
ERCC2-211ENST00000588652 TBC1D2BQ9UPU7 963 aa20.85■□□□□ 0.93
ERCC2-211ENST00000588652 MTMR6Q9Y217 621 aa20.85■□□□□ 0.93
ERCC2-211ENST00000588652 ITGA6P23229 1130 aa20.84■□□□□ 0.93
ERCC2-211ENST00000588652 CTSWP56202 376 aa20.84■□□□□ 0.93
ERCC2-211ENST00000588652 UBE2HP62256 183 aa20.84■□□□□ 0.93
ERCC2-211ENST00000588652 GORABQ5T7V8 394 aa20.84■□□□□ 0.93
ERCC2-211ENST00000588652 DSCC1Q9BVC3 393 aa20.84■□□□□ 0.93
ERCC2-211ENST00000588652 TRMT112Q9UI30 125 aaKnown RBP20.84■□□□□ 0.93
ERCC2-211ENST00000588652 RIPOR2Q9Y4F9 1068 aa20.84■□□□□ 0.93
ERCC2-211ENST00000588652 RIC1Q4ADV7 1423 aa20.84■□□□□ 0.93
ERCC2-211ENST00000588652 IRS4O14654 1257 aaPredicted RBP20.83■□□□□ 0.93
ERCC2-211ENST00000588652 RNF113AO15541 343 aaKnown RBP20.83■□□□□ 0.93
ERCC2-211ENST00000588652 ZNF500O60304 480 aaPredicted RBP20.83■□□□□ 0.93
ERCC2-211ENST00000588652 TTC39AQ5SRH9 613 aa20.83■□□□□ 0.93
ERCC2-211ENST00000588652 CCDC39Q9UFE4 941 aa20.83■□□□□ 0.93
ERCC2-211ENST00000588652 ZKSCAN5Q9Y2L8 839 aa20.83■□□□□ 0.93
ERCC2-211ENST00000588652 ZBTB22O15209 634 aa20.83■□□□□ 0.92
ERCC2-211ENST00000588652 FKBP4Q02790 459 aaKnown RBP eCLIP20.83■□□□□ 0.92
ERCC2-211ENST00000588652 LDHAL6AQ6ZMR3 332 aa20.83■□□□□ 0.92
ERCC2-211ENST00000588652 FIBPO43427 364 aa20.82■□□□□ 0.92
ERCC2-211ENST00000588652 MAST3O60307 1309 aa20.82■□□□□ 0.92
ERCC2-211ENST00000588652 UBN2Q6ZU65 1347 aa20.82■□□□□ 0.92
ERCC2-211ENST00000588652 LAMA4Q16363 1823 aa20.82■□□□□ 0.92
ERCC2-211ENST00000588652 CSPP1Q1MSJ5 1256 aa20.82■□□□□ 0.92
ERCC2-211ENST00000588652 ANKRD18BA2A2Z9 1011 aa20.81■□□□□ 0.92
ERCC2-211ENST00000588652 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.81■□□□□ 0.92
ERCC2-211ENST00000588652 ZNF34Q8IZ26 560 aa20.81■□□□□ 0.92
ERCC2-211ENST00000588652 HSPD1P10809 573 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms