RNA–Protein interactions for RNA: ENST00000588236.1

SPIRE1-212, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2

Gene SPIRE1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-212ENST00000588236 SALL4Q9UJQ4 1053 aa5.44□□□□□ -1.54
SPIRE1-212ENST00000588236 USP20Q9Y2K6 914 aa5.44□□□□□ -1.54
SPIRE1-212ENST00000588236 LOC102724428A0A0B4J2F2 783 aa5.43□□□□□ -1.54
SPIRE1-212ENST00000588236 GADD45BO75293 160 aaPredicted RBP5.43□□□□□ -1.54
SPIRE1-212ENST00000588236 SIK1P57059 783 aa5.43□□□□□ -1.54
SPIRE1-212ENST00000588236 CTBSQ01459 385 aa5.43□□□□□ -1.54
SPIRE1-212ENST00000588236 PTPN12Q05209 780 aaKnown RBP5.43□□□□□ -1.54
SPIRE1-212ENST00000588236 TTC9Q92623 222 aa5.43□□□□□ -1.54
SPIRE1-212ENST00000588236 SLC30A3Q99726 388 aa5.43□□□□□ -1.54
SPIRE1-212ENST00000588236 SUV39H2Q9H5I1 410 aa5.43□□□□□ -1.54
SPIRE1-212ENST00000588236 FRRS1LQ9P0K9 344 aa5.43□□□□□ -1.54
SPIRE1-212ENST00000588236 CNTN3Q9P232 1028 aa5.43□□□□□ -1.54
SPIRE1-212ENST00000588236 FOXD3Q9UJU5 478 aaPredicted RBP5.43□□□□□ -1.54
SPIRE1-212ENST00000588236 A6NHS1 94 aa5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 SMNDC1O75940 238 aaKnown RBP eCLIP5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 GSTT1P30711 240 aa5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 NFX1Q12986 1120 aaKnown RBP5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 KANK3Q6NY19 840 aa5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 KRT25Q7Z3Z0 450 aa5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 MICALL1Q8N3F8 863 aa5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 DCAF11Q8TEB1 546 aa5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 ANKRD24Q8TF21 1146 aa5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 UBE2OQ9C0C9 1292 aaKnown RBP5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 CHRDQ9H2X0 955 aa5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 C12orf49Q9H741 205 aa5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 METTL5Q9NRN9 209 aaKnown RBP5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 ZFATQ9P243 1243 aa5.42□□□□□ -1.54
SPIRE1-212ENST00000588236 ELOA3CA0A087WX78 387 aaPredicted RBP5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 ELOA3DA6NLF2 546 aaPredicted RBP5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 POTECB2RU33 542 aa5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 LCE2BO14633 110 aa5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 SCAMP3O14828 347 aaKnown RBP5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 EREGO14944 169 aa5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 RLBP1P12271 317 aa5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 MRPL58Q14197 206 aaKnown RBP5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 ELOA3BQ3SY89 546 aa5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 SLCO4C1Q6ZQN7 724 aa5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 CEP120Q8N960 986 aa5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 ELOA3Q8NG57 546 aa5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 MUC3BQ9H195 1237 aa5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 EHD4Q9H223 541 aa5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 VTI1BQ9UEU0 232 aa5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 PPM1HQ9ULR3 514 aa5.41□□□□□ -1.54
SPIRE1-212ENST00000588236 GPR25O00155 361 aa5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 PIK3R2O00459 728 aa5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 ST13P50502 369 aaKnown RBP5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 RPS26P11Q5JNZ5 115 aaPredicted RBP5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 DIEXFQ68CQ4 756 aaKnown RBP5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 PRPF40BQ6NWY9 871 aaKnown RBP5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 TMEM102Q8N9M5 508 aaPredicted RBP5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 DDX54Q8TDD1 881 aaKnown RBP5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 CRELD1Q96HD1 420 aa5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 COL25A1Q9BXS0 654 aaPredicted RBP5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 OXCT2Q9BYC2 517 aaPredicted RBP5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 ENAMQ9NRM1 1142 aa5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 DNAJB12Q9NXW2 375 aaKnown RBP5.4□□□□□ -1.54
SPIRE1-212ENST00000588236 IGF1RP08069 1367 aa5.4□□□□□ -1.55
SPIRE1-212ENST00000588236 A0A1W2PP55 124 aa5.39□□□□□ -1.55
SPIRE1-212ENST00000588236 HNRNPUQ00839 825 aaKnown RBP eCLIP5.39□□□□□ -1.55
SPIRE1-212ENST00000588236 ELMSAN1Q6PJG2 1045 aa5.39□□□□□ -1.55
SPIRE1-212ENST00000588236 OSMRQ99650 979 aa5.39□□□□□ -1.55
SPIRE1-212ENST00000588236 PBX4Q9BYU1 374 aa5.39□□□□□ -1.55
SPIRE1-212ENST00000588236 BCO2Q9BYV7 579 aa5.39□□□□□ -1.55
SPIRE1-212ENST00000588236 CEP44Q9C0F1 390 aa5.39□□□□□ -1.55
SPIRE1-212ENST00000588236 BHLHE41Q9C0J9 482 aaPredicted RBP5.39□□□□□ -1.55
SPIRE1-212ENST00000588236 LIN7BQ9HAP6 207 aa5.39□□□□□ -1.55
SPIRE1-212ENST00000588236 NPHS2Q9NP85 383 aa5.39□□□□□ -1.55
SPIRE1-212ENST00000588236 WWC3Q9ULE0 1092 aa5.39□□□□□ -1.55
SPIRE1-212ENST00000588236 UNCXA6NJT0 531 aa5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 C2CD2LO14523 706 aa5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 PTPRAP18433 802 aa5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 ADH7P40394 386 aa5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 PCBP4P57723 403 aaKnown RBP5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 GAS6Q14393 721 aa5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 USPL1Q5W0Q7 1092 aa5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 FAM35AQ86V20 835 aa5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 CCNJLQ8IV13 435 aa5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 EPS8L3Q8TE67 593 aaKnown RBP5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 IGFLR1Q9H665 355 aa5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 DZANK1Q9NVP4 752 aa5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 SLC6A14Q9UN76 642 aa5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 RB1CC1Q8TDY2 1594 aa5.38□□□□□ -1.55
SPIRE1-212ENST00000588236 TMEM238LA0A1B0GVL6 79 aa5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 NEURL1BA8MQ27 555 aa5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 PDE2AO00408 941 aaPredicted RBP5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 RGS9O75916 674 aaPredicted RBP5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 SLURP2P0DP57 97 aa5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 TCF3P15923 654 aa5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 EIF2AK2P19525 551 aaKnown RBP5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 CABP4P57796 275 aa5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 PWP1Q13610 501 aa5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 GRM2Q14416 872 aa5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 TAF1CQ15572 869 aaPredicted RBP5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 DTHD1Q6ZMT9 781 aa5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 TMEM87AQ8NBN3 555 aa5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 BSNDQ8WZ55 320 aa5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 NOC4LQ9BVI4 516 aaKnown RBP5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 BACH2Q9BYV9 841 aa5.37□□□□□ -1.55
SPIRE1-212ENST00000588236 SRA1Q9HD15 236 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms