RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 L2HGDHQ9H9P8 463 aa19.26■□□□□ 0.67
RANBP3-209ENST00000587411 TRMT1Q9NXH9 659 aaKnown RBP19.26■□□□□ 0.67
RANBP3-209ENST00000587411 ANKARQ7Z5J8 1434 aa19.26■□□□□ 0.67
RANBP3-209ENST00000587411 KCNJ6P48051 423 aa19.26■□□□□ 0.67
RANBP3-209ENST00000587411 CWF19L2Q2TBE0 894 aaKnown RBP19.26■□□□□ 0.67
RANBP3-209ENST00000587411 ENGASEQ8NFI3 743 aa19.26■□□□□ 0.67
RANBP3-209ENST00000587411 BICC1Q9H694 974 aaKnown RBP19.26■□□□□ 0.67
RANBP3-209ENST00000587411 NCAPD2Q15021 1401 aa19.25■□□□□ 0.67
RANBP3-209ENST00000587411 PFKFB2O60825 505 aa19.25■□□□□ 0.67
RANBP3-209ENST00000587411 CCDC150Q8NCX0 1101 aa19.25■□□□□ 0.67
RANBP3-209ENST00000587411 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.25■□□□□ 0.67
RANBP3-209ENST00000587411 ERBB3P21860 1342 aa19.25■□□□□ 0.67
RANBP3-209ENST00000587411 MARF1Q9Y4F3 1742 aaKnown RBP19.25■□□□□ 0.67
RANBP3-209ENST00000587411 AKAP4Q5JQC9 854 aa19.25■□□□□ 0.67
RANBP3-209ENST00000587411 KAZALD1Q96I82 304 aa19.25■□□□□ 0.67
RANBP3-209ENST00000587411 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.25■□□□□ 0.67
RANBP3-209ENST00000587411 AMOTL2Q9Y2J4 779 aa19.25■□□□□ 0.67
RANBP3-209ENST00000587411 V9GYY5 206 aaPredicted RBP19.25■□□□□ 0.67
RANBP3-209ENST00000587411 HMGB1P09429 215 aaKnown RBP19.24■□□□□ 0.67
RANBP3-209ENST00000587411 LTKP29376 864 aa19.24■□□□□ 0.67
RANBP3-209ENST00000587411 SCRN1Q12765 414 aa19.24■□□□□ 0.67
RANBP3-209ENST00000587411 BMS1Q14692 1282 aaKnown RBP19.24■□□□□ 0.67
RANBP3-209ENST00000587411 PSDA5PKW4 1024 aaPredicted RBP19.24■□□□□ 0.67
RANBP3-209ENST00000587411 DDX58O95786 925 aaKnown RBP19.24■□□□□ 0.67
RANBP3-209ENST00000587411 CEBPZQ03701 1054 aaKnown RBP19.24■□□□□ 0.67
RANBP3-209ENST00000587411 AOPEPQ8N6M6 819 aa19.24■□□□□ 0.67
RANBP3-209ENST00000587411 NRDCO43847 1150 aa19.23■□□□□ 0.67
RANBP3-209ENST00000587411 H2AFXP16104 143 aaPredicted RBP19.23■□□□□ 0.67
RANBP3-209ENST00000587411 ATP5JP18859 108 aa19.23■□□□□ 0.67
RANBP3-209ENST00000587411 NSUN7Q8NE18 718 aaKnown RBP19.23■□□□□ 0.67
RANBP3-209ENST00000587411 FSIP1Q8NA03 581 aa19.22■□□□□ 0.67
RANBP3-209ENST00000587411 BPIFA3Q9BQP9 254 aa19.22■□□□□ 0.67
RANBP3-209ENST00000587411 LMO7Q8WWI1 1683 aa19.22■□□□□ 0.67
RANBP3-209ENST00000587411 FGD1P98174 961 aa19.22■□□□□ 0.67
RANBP3-209ENST00000587411 ABTB2Q8N961 1025 aa19.22■□□□□ 0.67
RANBP3-209ENST00000587411 IP6K1Q92551 441 aa19.22■□□□□ 0.67
RANBP3-209ENST00000587411 CHMP4CQ96CF2 233 aa19.22■□□□□ 0.67
RANBP3-209ENST00000587411 USP28Q96RU2 1077 aa19.22■□□□□ 0.67
RANBP3-209ENST00000587411 OVOS2A0A0G2JMS6 1433 aa19.22■□□□□ 0.67
RANBP3-209ENST00000587411 NBPF11Q86T75 865 aa19.21■□□□□ 0.67
RANBP3-209ENST00000587411 SLC26A8Q96RN1 970 aa19.21■□□□□ 0.67
RANBP3-209ENST00000587411 PROSER3Q2NL68 480 aa19.21■□□□□ 0.67
RANBP3-209ENST00000587411 COL15A1P39059 1388 aa19.21■□□□□ 0.67
RANBP3-209ENST00000587411 HEG1Q9ULI3 1381 aa19.21■□□□□ 0.67
RANBP3-209ENST00000587411 ME1P48163 572 aa19.2■□□□□ 0.66
RANBP3-209ENST00000587411 E4F1Q66K89 784 aaPredicted RBP19.2■□□□□ 0.66
RANBP3-209ENST00000587411 ZNF530Q6P9A1 599 aaPredicted RBP19.2■□□□□ 0.66
RANBP3-209ENST00000587411 MRPS27Q92552 414 aaKnown RBP19.2■□□□□ 0.66
RANBP3-209ENST00000587411 PPP1R13BQ96KQ4 1090 aa19.2■□□□□ 0.66
RANBP3-209ENST00000587411 SIL1Q9H173 461 aa19.2■□□□□ 0.66
RANBP3-209ENST00000587411 ZNF446Q9NWS9 450 aa19.2■□□□□ 0.66
RANBP3-209ENST00000587411 CALCOCO1Q9P1Z2 691 aa19.2■□□□□ 0.66
RANBP3-209ENST00000587411 PTPDC1A2A3K4 754 aa19.2■□□□□ 0.66
RANBP3-209ENST00000587411 CYP21A2P08686 494 aa19.2■□□□□ 0.66
RANBP3-209ENST00000587411 PLEKHO1Q53GL0 409 aaPredicted RBP19.2■□□□□ 0.66
RANBP3-209ENST00000587411 CCDC93Q567U6 631 aa19.2■□□□□ 0.66
RANBP3-209ENST00000587411 TIGD1Q96MW7 591 aa19.2■□□□□ 0.66
RANBP3-209ENST00000587411 RGPD8O14715 1765 aaPredicted RBP19.2■□□□□ 0.66
RANBP3-209ENST00000587411 CCP110O43303 1012 aa19.19■□□□□ 0.66
RANBP3-209ENST00000587411 TPM4P67936 248 aa19.19■□□□□ 0.66
RANBP3-209ENST00000587411 ZRSR1Q15695 479 aaKnown RBP19.19■□□□□ 0.66
RANBP3-209ENST00000587411 TBX22Q9Y458 520 aa19.19■□□□□ 0.66
RANBP3-209ENST00000587411 TSPOAP1O95153 1857 aa19.19■□□□□ 0.66
RANBP3-209ENST00000587411 MYH15Q9Y2K3 1946 aa19.19■□□□□ 0.66
RANBP3-209ENST00000587411 A0A1W2PQ27 194 aa19.19■□□□□ 0.66
RANBP3-209ENST00000587411 A0A1W2PQ64 194 aa19.19■□□□□ 0.66
RANBP3-209ENST00000587411 A0A1W2PQD8 194 aa19.19■□□□□ 0.66
RANBP3-209ENST00000587411 MCMDC2Q4G0Z9 681 aa19.19■□□□□ 0.66
RANBP3-209ENST00000587411 NBPF6Q5VWK0 638 aa19.19■□□□□ 0.66
RANBP3-209ENST00000587411 DHX32Q7L7V1 743 aaKnown RBP19.19■□□□□ 0.66
RANBP3-209ENST00000587411 FMR1NBQ8N0W7 255 aaPredicted RBP19.19■□□□□ 0.66
RANBP3-209ENST00000587411 NBPF4Q96M43 638 aa19.19■□□□□ 0.66
RANBP3-209ENST00000587411 FTOQ9C0B1 505 aaKnown RBP eCLIP19.19■□□□□ 0.66
RANBP3-209ENST00000587411 BCL11BQ9C0K0 894 aaPredicted RBP19.19■□□□□ 0.66
RANBP3-209ENST00000587411 EID1Q9Y6B2 187 aa19.19■□□□□ 0.66
RANBP3-209ENST00000587411 SFPQP23246 707 aaKnown RBP eCLIP19.18■□□□□ 0.66
RANBP3-209ENST00000587411 ZNF609O15014 1411 aa19.18■□□□□ 0.66
RANBP3-209ENST00000587411 AMOTQ4VCS5 1084 aa19.18■□□□□ 0.66
RANBP3-209ENST00000587411 SDF4Q9BRK5 362 aa19.18■□□□□ 0.66
RANBP3-209ENST00000587411 RNMTO43148 476 aaKnown RBP19.18■□□□□ 0.66
RANBP3-209ENST00000587411 CTDNEP1O95476 244 aa19.18■□□□□ 0.66
RANBP3-209ENST00000587411 ADALQ6DHV7 355 aa19.18■□□□□ 0.66
RANBP3-209ENST00000587411 EDC3Q96F86 508 aaKnown RBP19.18■□□□□ 0.66
RANBP3-209ENST00000587411 NOL10Q9BSC4 688 aaKnown RBP19.18■□□□□ 0.66
RANBP3-209ENST00000587411 DDX21Q9NR30 783 aaKnown RBP eCLIP19.18■□□□□ 0.66
RANBP3-209ENST00000587411 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.18■□□□□ 0.666e-6■□□□□ 9.8
RANBP3-209ENST00000587411 SALL1Q9NSC2 1324 aa19.17■□□□□ 0.66
RANBP3-209ENST00000587411 ERCC6LQ2NKX8 1250 aa19.17■□□□□ 0.66
RANBP3-209ENST00000587411 AGXT2Q9BYV1 514 aa19.17■□□□□ 0.66
RANBP3-209ENST00000587411 MPRIPQ6WCQ1 1025 aa19.17■□□□□ 0.66
RANBP3-209ENST00000587411 SYT10Q6XYQ8 523 aa19.17■□□□□ 0.66
RANBP3-209ENST00000587411 COPRSQ9NQ92 184 aa19.17■□□□□ 0.66
RANBP3-209ENST00000587411 RTEL1Q9NZ71 1219 aa19.17■□□□□ 0.66
RANBP3-209ENST00000587411 ABCC6O95255 1503 aa19.16■□□□□ 0.66
RANBP3-209ENST00000587411 SMC2O95347 1197 aa19.16■□□□□ 0.66
RANBP3-209ENST00000587411 ARMCX5Q6P1M9 558 aa19.16■□□□□ 0.66
RANBP3-209ENST00000587411 XPO4Q9C0E2 1151 aaKnown RBP19.16■□□□□ 0.66
RANBP3-209ENST00000587411 ARGLU1Q9NWB6 273 aaPredicted RBP19.16■□□□□ 0.66
RANBP3-209ENST00000587411 KIAA1468Q9P260 1216 aa19.16■□□□□ 0.66
RANBP3-209ENST00000587411 TMC6Q7Z403 805 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms