RNA–Protein interactions for RNA: ENST00000586518.1

H3F3B-203, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 1,701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-203ENST00000586518 FOXD4L1Q9NU39 408 aa35.83■■■■□ 3.33
H3F3B-203ENST00000586518 RTL9Q8NET4 1388 aa35.83■■■■□ 3.33
H3F3B-203ENST00000586518 MCMDC2Q4G0Z9 681 aa35.83■■■■□ 3.33
H3F3B-203ENST00000586518 PTF1AQ7RTS3 328 aa35.83■■■■□ 3.33
H3F3B-203ENST00000586518 NARFQ9UHQ1 456 aa35.83■■■■□ 3.33
H3F3B-203ENST00000586518 RTCBQ9Y3I0 505 aaKnown RBP35.83■■■■□ 3.33
H3F3B-203ENST00000586518 RIC1Q4ADV7 1423 aa35.82■■■■□ 3.33
H3F3B-203ENST00000586518 ZPR1O75312 459 aa35.82■■■■□ 3.32
H3F3B-203ENST00000586518 FAM182BQ5T319 152 aa35.82■■■■□ 3.32
H3F3B-203ENST00000586518 PRPF40BQ6NWY9 871 aaKnown RBP35.82■■■■□ 3.32
H3F3B-203ENST00000586518 RBM8AQ9Y5S9 174 aaKnown RBP35.82■■■■□ 3.32
H3F3B-203ENST00000586518 PDE8BO95263 885 aa35.81■■■■□ 3.32
H3F3B-203ENST00000586518 NECTIN1Q15223 517 aa35.81■■■■□ 3.32
H3F3B-203ENST00000586518 TM6SF1Q9BZW5 370 aa35.81■■■■□ 3.32
H3F3B-203ENST00000586518 BCL11BQ9C0K0 894 aaPredicted RBP35.81■■■■□ 3.32
H3F3B-203ENST00000586518 HELLSQ9NRZ9 838 aa35.81■■■■□ 3.32
H3F3B-203ENST00000586518 LAMB2P55268 1798 aa35.81■■■■□ 3.32
H3F3B-203ENST00000586518 IGHMBP2P38935 993 aaKnown RBP35.8■■■■□ 3.32
H3F3B-203ENST00000586518 GNPATO15228 680 aa35.8■■■■□ 3.32
H3F3B-203ENST00000586518 NYXQ9GZU5 481 aa35.8■■■■□ 3.32
H3F3B-203ENST00000586518 PSMA5P28066 241 aa35.79■■■■□ 3.32
H3F3B-203ENST00000586518 KCNQ4P56696 695 aa35.79■■■■□ 3.32
H3F3B-203ENST00000586518 HMG20BQ9P0W2 317 aa35.79■■■■□ 3.32
H3F3B-203ENST00000586518 NUCB2P80303 420 aa35.78■■■■□ 3.32
H3F3B-203ENST00000586518 ZNF512BQ96KM6 892 aaPredicted RBP35.78■■■■□ 3.32
H3F3B-203ENST00000586518 UPF3BQ9BZI7 483 aaKnown RBP35.78■■■■□ 3.32
H3F3B-203ENST00000586518 NDUFB9Q9Y6M9 179 aa35.78■■■■□ 3.32
H3F3B-203ENST00000586518 SBF2Q86WG5 1849 aa35.77■■■■□ 3.32
H3F3B-203ENST00000586518 SSFA2P28290 1259 aa35.77■■■■□ 3.32
H3F3B-203ENST00000586518 GTF2E1P29083 439 aaPredicted RBP35.77■■■■□ 3.32
H3F3B-203ENST00000586518 PUM3Q15397 648 aaKnown RBP35.77■■■■□ 3.32
H3F3B-203ENST00000586518 TMX3Q96JJ7 454 aa35.77■■■■□ 3.32
H3F3B-203ENST00000586518 LY75O60449 1722 aa35.77■■■■□ 3.32
H3F3B-203ENST00000586518 HMGB2P26583 209 aaKnown RBP35.77■■■■□ 3.32
H3F3B-203ENST00000586518 ADORA1P30542 326 aa35.77■■■■□ 3.32
H3F3B-203ENST00000586518 CREB3L3Q68CJ9 461 aa35.77■■■■□ 3.32
H3F3B-203ENST00000586518 RASEFQ8IZ41 740 aa35.77■■■■□ 3.32
H3F3B-203ENST00000586518 VGLL2Q8N8G2 317 aa35.77■■■■□ 3.32
H3F3B-203ENST00000586518 CDC5LQ99459 802 aaKnown RBP35.77■■■■□ 3.32
H3F3B-203ENST00000586518 SCN7AQ01118 1682 aa35.77■■■■□ 3.32
H3F3B-203ENST00000586518 ZFYP08048 801 aaPredicted RBP35.76■■■■□ 3.31
H3F3B-203ENST00000586518 LPIN2Q92539 896 aa35.76■■■■□ 3.31
H3F3B-203ENST00000586518 LRP5O75197 1615 aa35.76■■■■□ 3.31
H3F3B-203ENST00000586518 DDX60Q8IY21 1712 aaKnown RBP35.76■■■■□ 3.31
H3F3B-203ENST00000586518 TAF5LO75529 589 aa35.75■■■■□ 3.31
H3F3B-203ENST00000586518 FKBP4Q02790 459 aaKnown RBP eCLIP35.75■■■■□ 3.31
H3F3B-203ENST00000586518 RAB3GAP1Q15042 981 aa35.75■■■■□ 3.31
H3F3B-203ENST00000586518 U3KPZ7 1027 aaPredicted RBP35.75■■■■□ 3.31
H3F3B-203ENST00000586518 RNF113AO15541 343 aaKnown RBP35.74■■■■□ 3.31
H3F3B-203ENST00000586518 GBP4Q96PP9 640 aa35.74■■■■□ 3.31
H3F3B-203ENST00000586518 SETDB2Q96T68 719 aa35.74■■■■□ 3.31
H3F3B-203ENST00000586518 CYP46A1Q9Y6A2 500 aa35.74■■■■□ 3.31
H3F3B-203ENST00000586518 UQCRFS1P1P0C7P4 283 aa35.74■■■■□ 3.31
H3F3B-203ENST00000586518 FAM196AQ6ZSG2 479 aa35.74■■■■□ 3.31
H3F3B-203ENST00000586518 INTS4Q96HW7 963 aaKnown RBP35.74■■■■□ 3.31
H3F3B-203ENST00000586518 SLC5A1P13866 664 aa35.73■■■■□ 3.31
H3F3B-203ENST00000586518 CASTP20810 708 aaKnown RBP35.73■■■■□ 3.31
H3F3B-203ENST00000586518 USPL1Q5W0Q7 1092 aa35.73■■■■□ 3.31
H3F3B-203ENST00000586518 ZNF589Q86UQ0 364 aaPredicted RBP35.73■■■■□ 3.31
H3F3B-203ENST00000586518 JAKMIP1Q96N16 626 aaKnown RBP35.73■■■■□ 3.31
H3F3B-203ENST00000586518 SLC27A2O14975 620 aa35.72■■■■□ 3.31
H3F3B-203ENST00000586518 CUL4AQ13619 759 aa35.72■■■■□ 3.31
H3F3B-203ENST00000586518 KRT32Q14532 448 aa35.72■■■■□ 3.31
H3F3B-203ENST00000586518 TTF1Q15361 905 aaPredicted RBP35.71■■■■□ 3.31
H3F3B-203ENST00000586518 ZMYM1Q5SVZ6 1142 aa35.71■■■■□ 3.31
H3F3B-203ENST00000586518 ZSWIM6Q9HCJ5 1215 aa35.71■■■■□ 3.31
H3F3B-203ENST00000586518 MCM4P33991 863 aa35.7■■■■□ 3.31
H3F3B-203ENST00000586518 SF3B3Q15393 1217 aaKnown RBP35.7■■■■□ 3.31
H3F3B-203ENST00000586518 SLC10A5Q5PT55 438 aa35.7■■■■□ 3.31
H3F3B-203ENST00000586518 VPS53Q5VIR6 699 aa35.7■■■■□ 3.31
H3F3B-203ENST00000586518 ZSCAN25Q6NSZ9 544 aa35.7■■■■□ 3.31
H3F3B-203ENST00000586518 DDX24Q9GZR7 859 aaKnown RBP eCLIP35.7■■■■□ 3.311e-8■■■■■ 50
H3F3B-203ENST00000586518 ERFEQ4G0M1 354 aa35.69■■■■□ 3.3
H3F3B-203ENST00000586518 TRAPPC3LQ5T215 181 aa35.69■■■■□ 3.3
H3F3B-203ENST00000586518 TBC1D9BQ66K14 1250 aa35.69■■■■□ 3.3
H3F3B-203ENST00000586518 BICDL1Q6ZP65 573 aa35.69■■■■□ 3.3
H3F3B-203ENST00000586518 SEC31BQ9NQW1 1179 aa35.69■■■■□ 3.3
H3F3B-203ENST00000586518 PTMSP20962 102 aa35.69■■■■□ 3.3
H3F3B-203ENST00000586518 TSGA10IPQ3SY00 556 aa35.69■■■■□ 3.3
H3F3B-203ENST00000586518 TTC14Q96N46 770 aa35.69■■■■□ 3.3
H3F3B-203ENST00000586518 PDRG1Q9NUG6 133 aa35.69■■■■□ 3.3
H3F3B-203ENST00000586518 TAF1LQ8IZX4 1826 aa35.68■■■■□ 3.3
H3F3B-203ENST00000586518 DDX11L8A8MPP1 907 aa35.68■■■■□ 3.3
H3F3B-203ENST00000586518 RFC4P35249 363 aa35.68■■■■□ 3.3
H3F3B-203ENST00000586518 KRT27Q7Z3Y8 459 aa35.68■■■■□ 3.3
H3F3B-203ENST00000586518 BCL2L12Q9HB09 334 aa35.68■■■■□ 3.3
H3F3B-203ENST00000586518 LIMCH1Q9UPQ0 1083 aa35.68■■■■□ 3.3
H3F3B-203ENST00000586518 FGFR2P21802 821 aa35.67■■■■□ 3.3
H3F3B-203ENST00000586518 RUFY3Q7L099 469 aa35.67■■■■□ 3.3
H3F3B-203ENST00000586518 TNPO1Q92973 898 aaKnown RBP35.67■■■■□ 3.3
H3F3B-203ENST00000586518 TPTE2Q6XPS3 522 aa35.66■■■■□ 3.3
H3F3B-203ENST00000586518 NBPF5PQ86XG9 351 aaPredicted RBP35.66■■■■□ 3.3
H3F3B-203ENST00000586518 ARHGEF1Q92888 912 aaKnown RBP35.66■■■■□ 3.3
H3F3B-203ENST00000586518 ADRA2BP18089 450 aa35.66■■■■□ 3.3
H3F3B-203ENST00000586518 ZAP70P43403 619 aa35.66■■■■□ 3.3
H3F3B-203ENST00000586518 NOL8Q76FK4 1167 aaKnown RBP35.66■■■■□ 3.3
H3F3B-203ENST00000586518 ANKRD18AQ8IVF6 992 aa35.66■■■■□ 3.3
H3F3B-203ENST00000586518 ZSCAN31Q96LW9 406 aaPredicted RBP35.66■■■■□ 3.3
H3F3B-203ENST00000586518 DSCC1Q9BVC3 393 aa35.66■■■■□ 3.3
H3F3B-203ENST00000586518 C4BP0C0L5 1744 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms