RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 PERM1Q5SV97 790 aa8.76□□□□□ -1.01
NF1-223ENST00000584328 HFE2Q6ZVN8 426 aa8.76□□□□□ -1.01
NF1-223ENST00000584328 NUDT16Q96DE0 195 aaKnown RBP8.76□□□□□ -1.01
NF1-223ENST00000584328 EIF1AXP47813 144 aaKnown RBP8.75□□□□□ -1.01
NF1-223ENST00000584328 DNM1Q05193 864 aaKnown RBP8.75□□□□□ -1.01
NF1-223ENST00000584328 ELMSAN1Q6PJG2 1045 aa8.75□□□□□ -1.01
NF1-223ENST00000584328 EDEM1Q92611 657 aa8.75□□□□□ -1.01
NF1-223ENST00000584328 NSUN5Q96P11 429 aaKnown RBP8.75□□□□□ -1.01
NF1-223ENST00000584328 LPIN3Q9BQK8 851 aa8.75□□□□□ -1.01
NF1-223ENST00000584328 TOPBP1Q92547 1522 aa8.75□□□□□ -1.01
NF1-223ENST00000584328 ABCC8Q09428 1581 aa8.74□□□□□ -1.01
NF1-223ENST00000584328 DNMBPQ6XZF7 1577 aa8.74□□□□□ -1.01
NF1-223ENST00000584328 ITGB2P05107 769 aa8.74□□□□□ -1.01
NF1-223ENST00000584328 SOX18P35713 384 aa8.74□□□□□ -1.01
NF1-223ENST00000584328 AFF1P51825 1210 aaKnown RBP8.74□□□□□ -1.01
NF1-223ENST00000584328 ANO2Q9NQ90 1003 aa8.74□□□□□ -1.01
NF1-223ENST00000584328 FRRS1LQ9P0K9 344 aa8.74□□□□□ -1.01
NF1-223ENST00000584328 LOC102724428A0A0B4J2F2 783 aa8.73□□□□□ -1.01
NF1-223ENST00000584328 J3QW42 95 aa8.73□□□□□ -1.01
NF1-223ENST00000584328 PCSK2P16519 638 aa8.73□□□□□ -1.01
NF1-223ENST00000584328 EIF2AK2P19525 551 aaKnown RBP8.73□□□□□ -1.01
NF1-223ENST00000584328 SIK1P57059 783 aa8.73□□□□□ -1.01
NF1-223ENST00000584328 FKBP4Q02790 459 aaKnown RBP eCLIP8.73□□□□□ -1.01
NF1-223ENST00000584328 PDE4CQ08493 712 aa8.73□□□□□ -1.01
NF1-223ENST00000584328 ZNF211Q13398 564 aaPredicted RBP8.73□□□□□ -1.01
NF1-223ENST00000584328 SF3B2Q13435 895 aaKnown RBP8.73□□□□□ -1.01
NF1-223ENST00000584328 AAMPQ13685 434 aa8.73□□□□□ -1.01
NF1-223ENST00000584328 PRRT3Q5FWE3 981 aa8.73□□□□□ -1.01
NF1-223ENST00000584328 TRAPPC3LQ5T215 181 aa8.73□□□□□ -1.01
NF1-223ENST00000584328 TTC39BQ5VTQ0 682 aaPredicted RBP8.73□□□□□ -1.01
NF1-223ENST00000584328 ALKBH2Q6NS38 261 aa8.73□□□□□ -1.01
NF1-223ENST00000584328 CUX1P39880 1505 aa8.73□□□□□ -1.01
NF1-223ENST00000584328 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
NF1-223ENST00000584328 FAM13AO94988 1023 aa8.72□□□□□ -1.01
NF1-223ENST00000584328 IGHA1P01876 353 aa8.72□□□□□ -1.01
NF1-223ENST00000584328 PDGFAP04085 211 aa8.72□□□□□ -1.01
NF1-223ENST00000584328 RPLP1P05386 114 aaKnown RBP8.72□□□□□ -1.01
NF1-223ENST00000584328 SPATA31C1P0DKV0 1188 aa8.72□□□□□ -1.01
NF1-223ENST00000584328 HOXD8P13378 290 aaPredicted RBP8.72□□□□□ -1.01
NF1-223ENST00000584328 NPR3P17342 541 aa8.72□□□□□ -1.01
NF1-223ENST00000584328 MZF1P28698 734 aaPredicted RBP8.72□□□□□ -1.01
NF1-223ENST00000584328 OR13H1Q8NG92 308 aa8.72□□□□□ -1.01
NF1-223ENST00000584328 SMG9Q9H0W8 520 aaKnown RBP8.72□□□□□ -1.01
NF1-223ENST00000584328 GHRHP01286 108 aa8.71□□□□□ -1.02
NF1-223ENST00000584328 TRIM28Q13263 835 aaKnown RBP8.71□□□□□ -1.02
NF1-223ENST00000584328 PDE12Q6L8Q7 609 aaKnown RBP8.71□□□□□ -1.02
NF1-223ENST00000584328 ZNF438Q7Z4V0 828 aa8.71□□□□□ -1.02
NF1-223ENST00000584328 TTC16Q8NEE8 873 aa8.71□□□□□ -1.02
NF1-223ENST00000584328 ELP3Q9H9T3 547 aa8.71□□□□□ -1.02
NF1-223ENST00000584328 ABI2Q9NYB9 513 aaPredicted RBP8.71□□□□□ -1.02
NF1-223ENST00000584328 MSTNO14793 375 aa8.7□□□□□ -1.02
NF1-223ENST00000584328 SERPINB4P48594 390 aa8.7□□□□□ -1.02
NF1-223ENST00000584328 GRIK5Q16478 980 aa8.7□□□□□ -1.02
NF1-223ENST00000584328 C8orf34Q49A92 452 aa8.7□□□□□ -1.02
NF1-223ENST00000584328 TTC9Q92623 222 aa8.7□□□□□ -1.02
NF1-223ENST00000584328 PLD4Q96BZ4 506 aa8.7□□□□□ -1.02
NF1-223ENST00000584328 RBSNQ9H1K0 784 aa8.7□□□□□ -1.02
NF1-223ENST00000584328 GGNBP2Q9H3C7 697 aa8.7□□□□□ -1.02
NF1-223ENST00000584328 TMEM63CQ9P1W3 806 aa8.7□□□□□ -1.02
NF1-223ENST00000584328 POLIQ9UNA4 740 aa8.7□□□□□ -1.02
NF1-223ENST00000584328 WRNQ14191 1432 aaPredicted RBP eCLIP8.7□□□□□ -1.02
NF1-223ENST00000584328 POLA1P09884 1462 aaPredicted RBP8.7□□□□□ -1.02
NF1-223ENST00000584328 A6NHS1 94 aa8.69□□□□□ -1.02
NF1-223ENST00000584328 C1QTNF9BB2RNN3 333 aa8.69□□□□□ -1.02
NF1-223ENST00000584328 HYAL2Q12891 473 aa8.69□□□□□ -1.02
NF1-223ENST00000584328 CD163Q86VB7 1156 aa8.69□□□□□ -1.02
NF1-223ENST00000584328 DMRTC2Q8IXT2 367 aaPredicted RBP8.69□□□□□ -1.02
NF1-223ENST00000584328 SPOCK3Q9BQ16 436 aa8.69□□□□□ -1.02
NF1-223ENST00000584328 EGFL7Q9UHF1 273 aa8.69□□□□□ -1.02
NF1-223ENST00000584328 TOP2BQ02880 1626 aa8.69□□□□□ -1.02
NF1-223ENST00000584328 A0A0A0MRY4 1105 aa8.68□□□□□ -1.02
NF1-223ENST00000584328 CYP2E1P05181 493 aaPredicted RBP8.68□□□□□ -1.02
NF1-223ENST00000584328 CHRNA4P43681 627 aa8.68□□□□□ -1.02
NF1-223ENST00000584328 COL13A1Q5TAT6 717 aaPredicted RBP8.68□□□□□ -1.02
NF1-223ENST00000584328 MSL1Q68DK7 614 aa8.68□□□□□ -1.02
NF1-223ENST00000584328 SYNJ1O43426 1573 aa8.68□□□□□ -1.02
NF1-223ENST00000584328 BIVM-ERCC5R4GMW8 1640 aa8.68□□□□□ -1.02
NF1-223ENST00000584328 H3BRB1 525 aa8.67□□□□□ -1.02
NF1-223ENST00000584328 ICMTO60725 284 aa8.67□□□□□ -1.02
NF1-223ENST00000584328 APBA3O96018 575 aa8.67□□□□□ -1.02
NF1-223ENST00000584328 RAC1P63000 192 aa8.67□□□□□ -1.02
NF1-223ENST00000584328 XKR5Q6UX68 686 aa8.67□□□□□ -1.02
NF1-223ENST00000584328 WFDC8Q8IUA0 241 aa8.67□□□□□ -1.02
NF1-223ENST00000584328 SPACA7Q96KW9 195 aa8.67□□□□□ -1.02
NF1-223ENST00000584328 IFT140Q96RY7 1462 aa8.67□□□□□ -1.02
NF1-223ENST00000584328 TUT1Q9H6E5 874 aaKnown RBP8.67□□□□□ -1.02
NF1-223ENST00000584328 TARBP1Q13395 1621 aaKnown RBP8.66□□□□□ -1.02
NF1-223ENST00000584328 FGD5Q6ZNL6 1462 aa8.66□□□□□ -1.02
NF1-223ENST00000584328 FZD6O60353 706 aa8.66□□□□□ -1.02
NF1-223ENST00000584328 PROCP04070 461 aa8.66□□□□□ -1.02
NF1-223ENST00000584328 GRIK4Q16099 956 aa8.66□□□□□ -1.02
NF1-223ENST00000584328 GLYCTKQ8IVS8 523 aa8.66□□□□□ -1.02
NF1-223ENST00000584328 CCDC87Q9NVE4 849 aa8.66□□□□□ -1.02
NF1-223ENST00000584328 CNTN3Q9P232 1028 aa8.66□□□□□ -1.02
NF1-223ENST00000584328 USP5P45974 858 aa8.65□□□□□ -1.02
NF1-223ENST00000584328 GDF6Q6KF10 455 aaPredicted RBP8.65□□□□□ -1.02
NF1-223ENST00000584328 ILDR2Q71H61 639 aa8.65□□□□□ -1.02
NF1-223ENST00000584328 TXNDC2Q86VQ3 553 aa8.65□□□□□ -1.02
NF1-223ENST00000584328 NCAPG2Q86XI2 1143 aa8.65□□□□□ -1.02
NF1-223ENST00000584328 KIF4AO95239 1232 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms