RNA–Protein interactions for RNA: ENST00000580838.1

PTPRM-212, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-212ENST00000580838 SMG6Q86US8 1419 aaKnown RBP7.78□□□□□ -1.16
PTPRM-212ENST00000580838 KIAA1107Q9UPP5 1409 aa7.78□□□□□ -1.16
PTPRM-212ENST00000580838 MBD5Q9P267 1494 aa7.77□□□□□ -1.17
PTPRM-212ENST00000580838 ANKRD30AQ9BXX3 1397 aa7.77□□□□□ -1.17
PTPRM-212ENST00000580838 PPP1R12BO60237 982 aaPredicted RBP7.77□□□□□ -1.17
PTPRM-212ENST00000580838 H2AFB1P0C5Y9 115 aa7.77□□□□□ -1.17
PTPRM-212ENST00000580838 H2AFB2P0C5Z0 115 aa7.77□□□□□ -1.17
PTPRM-212ENST00000580838 SHISA2Q6UWI4 295 aa7.77□□□□□ -1.17
PTPRM-212ENST00000580838 WWC1Q8IX03 1113 aa7.77□□□□□ -1.17
PTPRM-212ENST00000580838 LARGE2Q8N3Y3 721 aa7.77□□□□□ -1.17
PTPRM-212ENST00000580838 OGFOD1Q8N543 542 aa7.77□□□□□ -1.17
PTPRM-212ENST00000580838 UBE2OQ9C0C9 1292 aaKnown RBP7.77□□□□□ -1.17
PTPRM-212ENST00000580838 KDM6BO15054 1643 aa7.77□□□□□ -1.17
PTPRM-212ENST00000580838 NUP153P49790 1475 aaKnown RBP7.76□□□□□ -1.17
PTPRM-212ENST00000580838 DKK1O94907 266 aa7.76□□□□□ -1.17
PTPRM-212ENST00000580838 BTLAQ7Z6A9 289 aa7.76□□□□□ -1.17
PTPRM-212ENST00000580838 TXNRD3Q86VQ6 643 aa7.76□□□□□ -1.17
PTPRM-212ENST00000580838 ALDH16A1Q8IZ83 802 aa7.76□□□□□ -1.17
PTPRM-212ENST00000580838 NUDT8Q8WV74 236 aa7.76□□□□□ -1.17
PTPRM-212ENST00000580838 LENG1Q96BZ8 264 aaPredicted RBP7.76□□□□□ -1.17
PTPRM-212ENST00000580838 IGFLR1Q9H665 355 aa7.76□□□□□ -1.17
PTPRM-212ENST00000580838 JPH1Q9HDC5 661 aaPredicted RBP7.76□□□□□ -1.17
PTPRM-212ENST00000580838 UHRF1BP1Q6BDS2 1440 aa7.76□□□□□ -1.17
PTPRM-212ENST00000580838 CARMIL2Q6F5E8 1435 aa7.76□□□□□ -1.17
PTPRM-212ENST00000580838 CROCC2H7BZ55 1655 aa7.76□□□□□ -1.17
PTPRM-212ENST00000580838 CAMSAP2Q08AD1 1489 aa7.75□□□□□ -1.17
PTPRM-212ENST00000580838 GRIN2AQ12879 1464 aa7.75□□□□□ -1.17
PTPRM-212ENST00000580838 MAGI1Q96QZ7 1491 aaPredicted RBP7.75□□□□□ -1.17
PTPRM-212ENST00000580838 DISP1Q96F81 1524 aa7.75□□□□□ -1.17
PTPRM-212ENST00000580838 PALM3A6NDB9 673 aaPredicted RBP7.75□□□□□ -1.17
PTPRM-212ENST00000580838 RAC1P63000 192 aa7.75□□□□□ -1.17
PTPRM-212ENST00000580838 ILDR2Q71H61 639 aa7.75□□□□□ -1.17
PTPRM-212ENST00000580838 SIX5Q8N196 739 aa7.75□□□□□ -1.17
PTPRM-212ENST00000580838 MKRN1Q9UHC7 482 aaKnown RBP7.75□□□□□ -1.17
PTPRM-212ENST00000580838 NAGPAQ9UK23 515 aa7.75□□□□□ -1.17
PTPRM-212ENST00000580838 KIF7Q2M1P5 1343 aa7.75□□□□□ -1.17
PTPRM-212ENST00000580838 PZPP20742 1482 aa7.75□□□□□ -1.17
PTPRM-212ENST00000580838 RALGAPBQ86X10 1494 aa7.75□□□□□ -1.17
PTPRM-212ENST00000580838 KDM5DQ9BY66 1539 aa7.74□□□□□ -1.17
PTPRM-212ENST00000580838 ATP9BO43861 1147 aa7.74□□□□□ -1.17
PTPRM-212ENST00000580838 AFF1P51825 1210 aaKnown RBP7.74□□□□□ -1.17
PTPRM-212ENST00000580838 C2orf49Q9BVC5 232 aaPredicted RBP7.74□□□□□ -1.17
PTPRM-212ENST00000580838 DNAJB12Q9NXW2 375 aaKnown RBP7.74□□□□□ -1.17
PTPRM-212ENST00000580838 ATAD2Q6PL18 1390 aa7.73□□□□□ -1.17
PTPRM-212ENST00000580838 USP47Q96K76 1375 aa7.73□□□□□ -1.17
PTPRM-212ENST00000580838 NRG1Q02297 640 aaPredicted RBP7.73□□□□□ -1.17
PTPRM-212ENST00000580838 HDGFL1Q5TGJ6 251 aa7.73□□□□□ -1.17
PTPRM-212ENST00000580838 PSAPL1Q6NUJ1 521 aa7.73□□□□□ -1.17
PTPRM-212ENST00000580838 STAG2Q8N3U4 1231 aa7.73□□□□□ -1.17
PTPRM-212ENST00000580838 ZNF594Q96JF6 807 aaPredicted RBP7.73□□□□□ -1.17
PTPRM-212ENST00000580838 GSX2Q9BZM3 304 aa7.73□□□□□ -1.17
PTPRM-212ENST00000580838 CFDP1Q9UEE9 299 aaPredicted RBP7.73□□□□□ -1.17
PTPRM-212ENST00000580838 KIF15Q9NS87 1388 aa7.72□□□□□ -1.17
PTPRM-212ENST00000580838 DMRTC2Q8IXT2 367 aaPredicted RBP7.72□□□□□ -1.17
PTPRM-212ENST00000580838 FAM9BQ8IZU0 186 aa7.72□□□□□ -1.17
PTPRM-212ENST00000580838 FMR1NBQ8N0W7 255 aaPredicted RBP7.72□□□□□ -1.17
PTPRM-212ENST00000580838 NGLY1Q96IV0 654 aa7.72□□□□□ -1.17
PTPRM-212ENST00000580838 SSBP4Q9BWG4 385 aaPredicted RBP7.72□□□□□ -1.17
PTPRM-212ENST00000580838 EFCC1Q9HA90 598 aa7.72□□□□□ -1.17
PTPRM-212ENST00000580838 NUDCQ9Y266 331 aa7.72□□□□□ -1.17
PTPRM-212ENST00000580838 GPATCH8Q9UKJ3 1502 aaKnown RBP7.72□□□□□ -1.17
PTPRM-212ENST00000580838 INSRP06213 1382 aa7.71□□□□□ -1.17
PTPRM-212ENST00000580838 ANKRD50Q9ULJ7 1429 aa7.71□□□□□ -1.17
PTPRM-212ENST00000580838 RAD21O60216 631 aa7.71□□□□□ -1.18
PTPRM-212ENST00000580838 LRP8Q14114 963 aa7.71□□□□□ -1.18
PTPRM-212ENST00000580838 RALBP1Q15311 655 aa7.71□□□□□ -1.18
PTPRM-212ENST00000580838 NBPF8Q3BBV2 869 aa7.71□□□□□ -1.18
PTPRM-212ENST00000580838 NBPF11Q86T75 865 aa7.71□□□□□ -1.18
PTPRM-212ENST00000580838 KRTAP1-3Q8IUG1 177 aa7.71□□□□□ -1.18
PTPRM-212ENST00000580838 SCG3Q8WXD2 468 aaKnown RBP7.71□□□□□ -1.18
PTPRM-212ENST00000580838 TP53INP1Q96A56 240 aa7.71□□□□□ -1.18
PTPRM-212ENST00000580838 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.71□□□□□ -1.18
PTPRM-212ENST00000580838 RNF123Q5XPI4 1314 aa7.71□□□□□ -1.18
PTPRM-212ENST00000580838 KDM5CP41229 1560 aa7.71□□□□□ -1.18
PTPRM-212ENST00000580838 ARHGEF5Q12774 1597 aa7.71□□□□□ -1.18
PTPRM-212ENST00000580838 BRD4O60885 1362 aaPredicted RBP7.71□□□□□ -1.18
PTPRM-212ENST00000580838 DHX29Q7Z478 1369 aaKnown RBP7.71□□□□□ -1.18
PTPRM-212ENST00000580838 SYNJ2O15056 1496 aa7.7□□□□□ -1.18
PTPRM-212ENST00000580838 ZMYM4Q5VZL5 1548 aa7.7□□□□□ -1.18
PTPRM-212ENST00000580838 HYAL3O43820 417 aaPredicted RBP7.7□□□□□ -1.18
PTPRM-212ENST00000580838 NFKB1P19838 968 aa7.7□□□□□ -1.18
PTPRM-212ENST00000580838 GRNP28799 593 aaKnown RBP7.7□□□□□ -1.18
PTPRM-212ENST00000580838 CCINQ13939 588 aa7.7□□□□□ -1.18
PTPRM-212ENST00000580838 CHMP7Q8WUX9 453 aaPredicted RBP7.7□□□□□ -1.18
PTPRM-212ENST00000580838 KRTAP4-12Q9BQ66 201 aa7.7□□□□□ -1.18
PTPRM-212ENST00000580838 DMGDHQ9UI17 866 aaKnown RBP7.7□□□□□ -1.18
PTPRM-212ENST00000580838 BCS1LQ9Y276 419 aa7.7□□□□□ -1.18
PTPRM-212ENST00000580838 EIF4G3O43432 1585 aaKnown RBP7.69□□□□□ -1.18
PTPRM-212ENST00000580838 RGS9O75916 674 aaPredicted RBP7.69□□□□□ -1.18
PTPRM-212ENST00000580838 ANP32AP39687 249 aaKnown RBP7.69□□□□□ -1.18
PTPRM-212ENST00000580838 PDE3BQ13370 1112 aa7.69□□□□□ -1.18
PTPRM-212ENST00000580838 HIF1AQ16665 826 aa7.69□□□□□ -1.18
PTPRM-212ENST00000580838 IER5Q5VY09 327 aa7.69□□□□□ -1.18
PTPRM-212ENST00000580838 GAS2L2Q8NHY3 880 aa7.69□□□□□ -1.18
PTPRM-212ENST00000580838 PNMA5Q96PV4 448 aa7.69□□□□□ -1.18
PTPRM-212ENST00000580838 USP21Q9UK80 565 aa7.69□□□□□ -1.18
PTPRM-212ENST00000580838 C9orf84Q5VXU9 1444 aa7.69□□□□□ -1.18
PTPRM-212ENST00000580838 TMC1Q8TDI8 760 aa7.68□□□□□ -1.18
PTPRM-212ENST00000580838 WASHC2CQ9Y4E1 1318 aa7.68□□□□□ -1.18
PTPRM-212ENST00000580838 TGFBR3LH3BV60 316 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms