RNA–Protein interactions for RNA: ENST00000580621.5

KRT16P3-203, Transcript of keratin 16 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene KRT16P3, Length 1,939 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P3-203ENST00000580621 FRAT2O75474 233 aaPredicted RBP23.82■■□□□ 1.4
KRT16P3-203ENST00000580621 MCM2P49736 904 aa23.82■■□□□ 1.4
KRT16P3-203ENST00000580621 SMIM5Q71RC9 77 aa23.82■■□□□ 1.4
KRT16P3-203ENST00000580621 VGLL2Q8N8G2 317 aa23.82■■□□□ 1.4
KRT16P3-203ENST00000580621 IL27Q8NEV9 243 aa23.82■■□□□ 1.4
KRT16P3-203ENST00000580621 BCL11BQ9C0K0 894 aaPredicted RBP23.82■■□□□ 1.4
KRT16P3-203ENST00000580621 NARFQ9UHQ1 456 aa23.82■■□□□ 1.4
KRT16P3-203ENST00000580621 RTL9Q8NET4 1388 aa23.82■■□□□ 1.4
KRT16P3-203ENST00000580621 CCDC152Q4G0S7 254 aa23.81■■□□□ 1.4
KRT16P3-203ENST00000580621 TTC39AQ5SRH9 613 aa23.81■■□□□ 1.4
KRT16P3-203ENST00000580621 TICAM2Q86XR7 235 aa23.81■■□□□ 1.4
KRT16P3-203ENST00000580621 RASEFQ8IZ41 740 aa23.81■■□□□ 1.4
KRT16P3-203ENST00000580621 BCL2L12Q9HB09 334 aa23.81■■□□□ 1.4
KRT16P3-203ENST00000580621 BRWD3Q6RI45 1802 aa23.81■■□□□ 1.4
KRT16P3-203ENST00000580621 MAP4K1Q92918 833 aa23.8■■□□□ 1.4
KRT16P3-203ENST00000580621 KCNB2Q92953 911 aa23.8■■□□□ 1.4
KRT16P3-203ENST00000580621 C4BP0C0L5 1744 aa23.8■■□□□ 1.4
KRT16P3-203ENST00000580621 ABCC12Q96J65 1359 aa23.79■■□□□ 1.4
KRT16P3-203ENST00000580621 MROH5Q6ZUA9 1318 aa23.79■■□□□ 1.4
KRT16P3-203ENST00000580621 USPL1Q5W0Q7 1092 aa23.79■■□□□ 1.4
KRT16P3-203ENST00000580621 PRPF40BQ6NWY9 871 aaKnown RBP23.79■■□□□ 1.4
KRT16P3-203ENST00000580621 ZNF589Q86UQ0 364 aaPredicted RBP23.79■■□□□ 1.4
KRT16P3-203ENST00000580621 UPF3BQ9BZI7 483 aaKnown RBP23.79■■□□□ 1.4
KRT16P3-203ENST00000580621 RTCBQ9Y3I0 505 aaKnown RBP23.79■■□□□ 1.4
KRT16P3-203ENST00000580621 RBM8AQ9Y5S9 174 aaKnown RBP23.79■■□□□ 1.4
KRT16P3-203ENST00000580621 PDE8BO95263 885 aa23.78■■□□□ 1.4
KRT16P3-203ENST00000580621 NECTIN1Q15223 517 aa23.78■■□□□ 1.4
KRT16P3-203ENST00000580621 SEC31BQ9NQW1 1179 aa23.78■■□□□ 1.4
KRT16P3-203ENST00000580621 CASZ1Q86V15 1759 aa23.78■■□□□ 1.4
KRT16P3-203ENST00000580621 TBC1D9BQ66K14 1250 aa23.78■■□□□ 1.4
KRT16P3-203ENST00000580621 SRP68Q9UHB9 627 aaKnown RBP23.78■■□□□ 1.4
KRT16P3-203ENST00000580621 COL24A1Q17RW2 1714 aa23.77■■□□□ 1.4
KRT16P3-203ENST00000580621 ERFEQ4G0M1 354 aa23.77■■□□□ 1.4
KRT16P3-203ENST00000580621 ARAP2Q8WZ64 1704 aa23.77■■□□□ 1.4
KRT16P3-203ENST00000580621 ZPR1O75312 459 aa23.76■■□□□ 1.39
KRT16P3-203ENST00000580621 KCNJ4P48050 445 aa23.76■■□□□ 1.39
KRT16P3-203ENST00000580621 MCMDC2Q4G0Z9 681 aa23.76■■□□□ 1.39
KRT16P3-203ENST00000580621 BICDL1Q6ZP65 573 aa23.76■■□□□ 1.39
KRT16P3-203ENST00000580621 TAF5LO75529 589 aa23.76■■□□□ 1.39
KRT16P3-203ENST00000580621 CHGBP05060 677 aa23.76■■□□□ 1.39
KRT16P3-203ENST00000580621 CREB3L3Q68CJ9 461 aa23.76■■□□□ 1.39
KRT16P3-203ENST00000580621 MPHOSPH8Q99549 860 aa23.76■■□□□ 1.39
KRT16P3-203ENST00000580621 C4AP0C0L4 1744 aa23.75■■□□□ 1.39
KRT16P3-203ENST00000580621 AMIGO3Q86WK7 504 aa23.75■■□□□ 1.39
KRT16P3-203ENST00000580621 TMX3Q96JJ7 454 aa23.75■■□□□ 1.39
KRT16P3-203ENST00000580621 AKAP11Q9UKA4 1901 aa23.75■■□□□ 1.39
KRT16P3-203ENST00000580621 FKBP4Q02790 459 aaKnown RBP eCLIP23.74■■□□□ 1.39
KRT16P3-203ENST00000580621 PUM3Q15397 648 aaKnown RBP23.74■■□□□ 1.39
KRT16P3-203ENST00000580621 FAM196AQ6ZSG2 479 aa23.74■■□□□ 1.39
KRT16P3-203ENST00000580621 KRT27Q7Z3Y8 459 aa23.74■■□□□ 1.39
KRT16P3-203ENST00000580621 ARHGEF1Q92888 912 aaKnown RBP23.74■■□□□ 1.39
KRT16P3-203ENST00000580621 ZKSCAN1P17029 563 aaPredicted RBP23.74■■□□□ 1.39
KRT16P3-203ENST00000580621 IGHMBP2P38935 993 aaKnown RBP23.74■■□□□ 1.39
KRT16P3-203ENST00000580621 SCARF1Q14162 830 aa23.74■■□□□ 1.39
KRT16P3-203ENST00000580621 ZNF512BQ96KM6 892 aaPredicted RBP23.74■■□□□ 1.39
KRT16P3-203ENST00000580621 SEC62Q99442 399 aaKnown RBP23.74■■□□□ 1.39
KRT16P3-203ENST00000580621 HELLSQ9NRZ9 838 aa23.74■■□□□ 1.39
KRT16P3-203ENST00000580621 RNF113AO15541 343 aaKnown RBP23.73■■□□□ 1.39
KRT16P3-203ENST00000580621 FGFR2P21802 821 aa23.73■■□□□ 1.39
KRT16P3-203ENST00000580621 CCDC129Q6ZRS4 1044 aa23.73■■□□□ 1.39
KRT16P3-203ENST00000580621 HELBQ8NG08 1087 aaPredicted RBP23.73■■□□□ 1.39
KRT16P3-203ENST00000580621 SETDB2Q96T68 719 aa23.73■■□□□ 1.39
KRT16P3-203ENST00000580621 TM6SF1Q9BZW5 370 aa23.73■■□□□ 1.39
KRT16P3-203ENST00000580621 SLC27A2O14975 620 aa23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 SLC10A5Q5PT55 438 aa23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 ZMYM1Q5SVZ6 1142 aa23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 LPIN2Q92539 896 aa23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 TTC14Q96N46 770 aa23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 NYXQ9GZU5 481 aa23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 MYH7P12883 1935 aa23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 CASTP20810 708 aaKnown RBP23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 SSFA2P28290 1259 aa23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 RAB3GAP1Q15042 981 aa23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 SF3B3Q15393 1217 aaKnown RBP23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 RNF20Q5VTR2 975 aa23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 LRRC4BQ9NT99 713 aa23.72■■□□□ 1.39
KRT16P3-203ENST00000580621 ZAP70P43403 619 aa23.71■■□□□ 1.39
KRT16P3-203ENST00000580621 C3orf67Q6ZVT6 689 aa23.71■■□□□ 1.39
KRT16P3-203ENST00000580621 JAKMIP1Q96N16 626 aaKnown RBP23.71■■□□□ 1.39
KRT16P3-203ENST00000580621 CWC22Q9HCG8 908 aaKnown RBP23.71■■□□□ 1.39
KRT16P3-203ENST00000580621 GTF2E1P29083 439 aaPredicted RBP23.71■■□□□ 1.39
KRT16P3-203ENST00000580621 LRRFIP1Q32MZ4 808 aaKnown RBP23.71■■□□□ 1.39
KRT16P3-203ENST00000580621 ADCK5Q3MIX3 580 aa23.71■■□□□ 1.39
KRT16P3-203ENST00000580621 TRAPPC3LQ5T215 181 aa23.71■■□□□ 1.39
KRT16P3-203ENST00000580621 NOL8Q76FK4 1167 aaKnown RBP23.71■■□□□ 1.39
KRT16P3-203ENST00000580621 CDC5LQ99459 802 aaKnown RBP23.71■■□□□ 1.39
KRT16P3-203ENST00000580621 COL4A1P02462 1669 aa23.7■■□□□ 1.38
KRT16P3-203ENST00000580621 SLC5A1P13866 664 aa23.7■■□□□ 1.38
KRT16P3-203ENST00000580621 MCAMP43121 646 aa23.7■■□□□ 1.38
KRT16P3-203ENST00000580621 CUL4AQ13619 759 aa23.7■■□□□ 1.38
KRT16P3-203ENST00000580621 SLFNL1Q499Z3 407 aa23.7■■□□□ 1.38
KRT16P3-203ENST00000580621 ZSWIM6Q9HCJ5 1215 aa23.7■■□□□ 1.38
KRT16P3-203ENST00000580621 HMG20BQ9P0W2 317 aa23.7■■□□□ 1.38
KRT16P3-203ENST00000580621 RFC4P35249 363 aa23.69■■□□□ 1.38
KRT16P3-203ENST00000580621 NBPF5PQ86XG9 351 aaPredicted RBP23.69■■□□□ 1.38
KRT16P3-203ENST00000580621 ZGPATQ8N5A5 531 aaKnown RBP23.69■■□□□ 1.38
KRT16P3-203ENST00000580621 UBR3Q6ZT12 1888 aa23.69■■□□□ 1.38
KRT16P3-203ENST00000580621 PHF14O94880 888 aa23.69■■□□□ 1.38
KRT16P3-203ENST00000580621 CCDC102BQ68D86 513 aa23.69■■□□□ 1.38
KRT16P3-203ENST00000580621 PI16Q6UXB8 463 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms