RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 ATF7IPQ6VMQ6 1270 aa20.64■□□□□ 0.89
IFT20-210ENST00000580357 GPC2Q8N158 579 aa20.64■□□□□ 0.89
IFT20-210ENST00000580357 TBC1D16Q8TBP0 767 aa20.64■□□□□ 0.89
IFT20-210ENST00000580357 FRAT1Q92837 279 aaPredicted RBP20.64■□□□□ 0.89
IFT20-210ENST00000580357 SUCLG2Q96I99 432 aa20.64■□□□□ 0.89
IFT20-210ENST00000580357 POLLQ9UGP5 575 aa20.64■□□□□ 0.89
IFT20-210ENST00000580357 TAF1P21675 1872 aa20.64■□□□□ 0.89
IFT20-210ENST00000580357 TOMM70O94826 608 aa20.63■□□□□ 0.89
IFT20-210ENST00000580357 DDNO94850 711 aaPredicted RBP20.63■□□□□ 0.89
IFT20-210ENST00000580357 TAF7LQ5H9L4 462 aa20.63■□□□□ 0.89
IFT20-210ENST00000580357 ZKSCAN2Q63HK3 967 aa20.63■□□□□ 0.89
IFT20-210ENST00000580357 IQCA1LA6NCM1 817 aa20.62■□□□□ 0.89
IFT20-210ENST00000580357 TNIP1Q15025 636 aa20.62■□□□□ 0.89
IFT20-210ENST00000580357 EPHA10Q5JZY3 1008 aa20.62■□□□□ 0.89
IFT20-210ENST00000580357 SLC51AQ86UW1 340 aa20.62■□□□□ 0.89
IFT20-210ENST00000580357 L3MBTL3Q96JM7 780 aaPredicted RBP20.62■□□□□ 0.89
IFT20-210ENST00000580357 LEMD3Q9Y2U8 911 aa20.62■□□□□ 0.89
IFT20-210ENST00000580357 G3V3G9 751 aa20.61■□□□□ 0.89
IFT20-210ENST00000580357 UFL1O94874 794 aa20.61■□□□□ 0.89
IFT20-210ENST00000580357 UBTFL1P0CB47 393 aaPredicted RBP20.61■□□□□ 0.89
IFT20-210ENST00000580357 RABL6Q3YEC7 729 aaPredicted RBP20.61■□□□□ 0.89
IFT20-210ENST00000580357 DCAF8Q5TAQ9 597 aa20.61■□□□□ 0.89
IFT20-210ENST00000580357 KAZALD1Q96I82 304 aa20.61■□□□□ 0.89
IFT20-210ENST00000580357 GNAI3P08754 354 aa20.6■□□□□ 0.89
IFT20-210ENST00000580357 APLP1P51693 650 aa20.6■□□□□ 0.89
IFT20-210ENST00000580357 LDHAL6AQ6ZMR3 332 aa20.6■□□□□ 0.89
IFT20-210ENST00000580357 BICC1Q9H694 974 aaKnown RBP20.6■□□□□ 0.89
IFT20-210ENST00000580357 LRRC37AA6NMS7 1700 aa20.6■□□□□ 0.89
IFT20-210ENST00000580357 TIAM2Q8IVF5 1701 aa20.59■□□□□ 0.89
IFT20-210ENST00000580357 RIMBP2O15034 1052 aa20.59■□□□□ 0.89
IFT20-210ENST00000580357 TRIM27P14373 513 aa20.59■□□□□ 0.89
IFT20-210ENST00000580357 RBM46Q8TBY0 533 aaKnown RBP20.59■□□□□ 0.89
IFT20-210ENST00000580357 ZNF541Q9H0D2 1346 aa20.58■□□□□ 0.89
IFT20-210ENST00000580357 POTECB2RU33 542 aa20.58■□□□□ 0.89
IFT20-210ENST00000580357 MS4A1P11836 297 aa20.58■□□□□ 0.89
IFT20-210ENST00000580357 CXCL9Q07325 125 aa20.57■□□□□ 0.88
IFT20-210ENST00000580357 CIAPIN1Q6FI81 312 aa20.57■□□□□ 0.88
IFT20-210ENST00000580357 CNNM1Q9NRU3 951 aa20.57■□□□□ 0.88
IFT20-210ENST00000580357 GJA3Q9Y6H8 435 aa20.57■□□□□ 0.88
IFT20-210ENST00000580357 LMOD1P29536 600 aaPredicted RBP20.56■□□□□ 0.88
IFT20-210ENST00000580357 CHRNDQ07001 517 aa20.56■□□□□ 0.88
IFT20-210ENST00000580357 FSTL1Q12841 308 aa20.56■□□□□ 0.88
IFT20-210ENST00000580357 HACL1Q9UJ83 578 aa20.56■□□□□ 0.88
IFT20-210ENST00000580357 WDR90Q96KV7 1748 aa20.56■□□□□ 0.88
IFT20-210ENST00000580357 KCNJ4P48050 445 aa20.55■□□□□ 0.88
IFT20-210ENST00000580357 PODNQ7Z5L7 613 aa20.55■□□□□ 0.88
IFT20-210ENST00000580357 PNMA8AQ86V59 439 aaPredicted RBP20.55■□□□□ 0.88
IFT20-210ENST00000580357 FTSJ3Q8IY81 847 aaKnown RBP20.55■□□□□ 0.88
IFT20-210ENST00000580357 DZIP1LQ8IYY4 767 aaKnown RBP20.55■□□□□ 0.88
IFT20-210ENST00000580357 ANKRD44Q8N8A2 993 aa20.55■□□□□ 0.88
IFT20-210ENST00000580357 CLUAP1Q96AJ1 413 aa20.55■□□□□ 0.88
IFT20-210ENST00000580357 COL4A1P02462 1669 aa20.54■□□□□ 0.88
IFT20-210ENST00000580357 ZNF804BA4D1E1 1349 aa20.54■□□□□ 0.88
IFT20-210ENST00000580357 ECE2O60344 883 aa20.54■□□□□ 0.88
IFT20-210ENST00000580357 DOK7Q18PE1 504 aa20.53■□□□□ 0.88
IFT20-210ENST00000580357 SMC1BQ8NDV3 1235 aa20.53■□□□□ 0.88
IFT20-210ENST00000580357 ZNF594Q96JF6 807 aaPredicted RBP20.53■□□□□ 0.88
IFT20-210ENST00000580357 COA1Q9GZY4 146 aa20.53■□□□□ 0.88
IFT20-210ENST00000580357 TAF1DQ9H5J8 278 aaPredicted RBP20.53■□□□□ 0.88
IFT20-210ENST00000580357 DBNDD1Q9H9R9 158 aa20.53■□□□□ 0.88
IFT20-210ENST00000580357 RCAN3Q9UKA8 241 aa20.53■□□□□ 0.88
IFT20-210ENST00000580357 DUOX1Q9NRD9 1551 aa20.53■□□□□ 0.88
IFT20-210ENST00000580357 MROH5Q6ZUA9 1318 aa20.53■□□□□ 0.88
IFT20-210ENST00000580357 MED23Q9ULK4 1368 aa20.52■□□□□ 0.88
IFT20-210ENST00000580357 YDJCA8MPS7 323 aa20.52■□□□□ 0.88
IFT20-210ENST00000580357 RAD17O75943 681 aa20.52■□□□□ 0.88
IFT20-210ENST00000580357 C15orf52Q6ZUT6 534 aaKnown RBP20.52■□□□□ 0.88
IFT20-210ENST00000580357 FBXO3Q9UK99 471 aa20.52■□□□□ 0.88
IFT20-210ENST00000580357 RIPOR2Q9Y4F9 1068 aa20.52■□□□□ 0.88
IFT20-210ENST00000580357 COL4A5P29400 1685 aa20.51■□□□□ 0.87
IFT20-210ENST00000580357 RPS12P25398 132 aaKnown RBP20.51■□□□□ 0.87
IFT20-210ENST00000580357 EPHX2P34913 555 aa20.51■□□□□ 0.87
IFT20-210ENST00000580357 DPF2Q92785 391 aa20.51■□□□□ 0.87
IFT20-210ENST00000580357 GPR101Q96P66 508 aaPredicted RBP20.51■□□□□ 0.87
IFT20-210ENST00000580357 MEIS3Q99687 375 aa20.51■□□□□ 0.87
IFT20-210ENST00000580357 GNAI2P04899 355 aa20.5■□□□□ 0.87
IFT20-210ENST00000580357 UBE4AQ14139 1066 aa20.5■□□□□ 0.87
IFT20-210ENST00000580357 TMEM57Q8N5G2 664 aa20.5■□□□□ 0.87
IFT20-210ENST00000580357 LRRFIP2Q9Y608 721 aaKnown RBP20.5■□□□□ 0.87
IFT20-210ENST00000580357 LTBP1Q14766 1721 aa20.5■□□□□ 0.87
IFT20-210ENST00000580357 SCN4AP35499 1836 aa20.49■□□□□ 0.87
IFT20-210ENST00000580357 PLIN1O60240 522 aa20.49■□□□□ 0.87
IFT20-210ENST00000580357 TAF5LO75529 589 aa20.49■□□□□ 0.87
IFT20-210ENST00000580357 VIL1P09327 827 aaKnown RBP20.49■□□□□ 0.87
IFT20-210ENST00000580357 USP50Q70EL3 339 aaPredicted RBP20.49■□□□□ 0.87
IFT20-210ENST00000580357 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.49■□□□□ 0.87
IFT20-210ENST00000580357 HELBQ8NG08 1087 aaPredicted RBP20.49■□□□□ 0.87
IFT20-210ENST00000580357 GPRC5DQ9NZD1 345 aa20.49■□□□□ 0.87
IFT20-210ENST00000580357 H7C1D1 291 aa20.48■□□□□ 0.87
IFT20-210ENST00000580357 PSMD14O00487 310 aa20.48■□□□□ 0.87
IFT20-210ENST00000580357 SCNN1DP51172 638 aa20.48■□□□□ 0.87
IFT20-210ENST00000580357 LDHDQ86WU2 507 aa20.48■□□□□ 0.87
IFT20-210ENST00000580357 PUS3Q9BZE2 481 aaKnown RBP20.48■□□□□ 0.87
IFT20-210ENST00000580357 TNNQ9UQP3 1299 aa20.48■□□□□ 0.87
IFT20-210ENST00000580357 USP17L3A6NCW0 530 aa20.47■□□□□ 0.87
IFT20-210ENST00000580357 USP17L4A6NCW7 530 aa20.47■□□□□ 0.87
IFT20-210ENST00000580357 EPS15P42566 896 aa20.47■□□□□ 0.87
IFT20-210ENST00000580357 RFX5P48382 616 aaPredicted RBP20.47■□□□□ 0.87
IFT20-210ENST00000580357 GMPSP49915 693 aaPredicted RBP20.47■□□□□ 0.87
IFT20-210ENST00000580357 PTPN12Q05209 780 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms